Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:11:44 (3623278): wrapper (7.7.26015): starting
08:11:44 (3623278): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 08:11:44] Arguments: --nthreads 8
[2026-01-09 08:11:44] Threads: 8
[2026-01-09 08:11:44] Checking for CVMFS
[2026-01-09 08:11:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:11:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:11:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:11:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:11:44] 2.11.3.0 323444 91969 200940 154948 3 508 34118767 45568001 14223 130560 0 534684976 99.805 306824711 18736 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-09 08:11:44] CVMFS is ok
[2026-01-09 08:11:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:11:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:11:44] Further information can be found at the LHC@home message board.
[2026-01-09 08:11:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:11:44] Checking for apptainer binary...
[2026-01-09 08:11:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:11:44] Running /usr/bin/apptainer --version
[2026-01-09 08:11:44] apptainer version 1.4.1-1.el9
[2026-01-09 08:11:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:11:45] wns0003.triumf.lcg
[2026-01-09 08:11:45] apptainer works
[2026-01-09 08:11:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 08:11:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 08:11:45] Starting ATLAS job with PandaID=6963381546
[2026-01-09 08:11:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:21:30]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | ..............................
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | . Timing measurements:
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | . get job = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . initial setup = 3 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . payload setup = 31 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . stage-in = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . payload execution = 289 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . stage-out = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . log creation = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | ..............................
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381546/pilotlog.txt
[2026-01-09 08:21:30] 2026-01-09 16:20:57,541 | INFO     | monitor loop #104: job 0:6963381546 is in state 'failed'
[2026-01-09 08:21:30] 2026-01-09 16:20:57,542 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-09 08:21:30] 2026-01-09 16:20:57,548 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 08:21:30] - Log from pilotlog.txt -
[2026-01-09 08:21:30] 2026-01-09 16:20:57,499 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:21:30] 2026-01-09 16:20:57,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:21:30] 2026-01-09 16:20:57,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:21:30] 2026-01-09 16:20:57,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | WARNING  | wrong length of table data, x=[1767975231.0, 1767975292.0, 1767975353.0, 1767975414.0, 1767975475.0], y=[1816.0, 482953.0, 621806.0, 886705.0, 623652.0] (must be s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | ..............................
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | . Timing measurements:
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | . get job = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . initial setup = 3 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . payload setup = 31 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . stage-in = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . payload execution = 289 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . stage-out = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . log creation = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | ..............................
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381546/pilotlog.txt
[2026-01-09 08:21:30] 2026-01-09 16:20:57,541 | INFO     | monitor loop #104: job 0:6963381546 is in state 'failed'
[2026-01-09 08:21:30] 2026-01-09 16:20:57,542 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-09 08:21:30] 2026-01-09 16:20:57,548 | WARNING  | 
[2026-01-09 08:21:30] [begin log extracts]
[2026-01-09 08:21:30] - Log from pilotlog.txt -
[2026-01-09 08:21:30] 2026-01-09 16:20:57,499 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:21:30] 2026-01-09 16:20:57,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:21:30] 2026-01-09 16:20:57,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:21:30] 2026-01-09 16:20:57,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | WARNING  | wrong length of table data, x=[1767975231.0, 1767975292.0, 1767975353.0, 1767975414.0, 1767975475.0], y=[1816.0, 482953.0, 621806.0, 886705.0, 623652.0] (must be s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | ..............................
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | . Timing measurements:
[2026-01-09 08:21:30] 2026-01-09 16:20:57,512 | INFO     | . get job = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . initial setup = 3 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . payload setup = 31 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . stage-in = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . payload execution = 289 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . stage-out = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | . log creation = 0 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | ..............................
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:21:30] 2026-01-09 16:20:57,513 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381546/pilotlog.txt
[2026-01-09 08:21:30] 2026-01-09 16:20:57,541 | INFO     | monitor loop #104: job 0:6963381546 is in state 'failed'
[2026-01-09 08:21:30] 2026-01-09 16:20:57,542 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-09 08:21:30] [end log extracts]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,548 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 08:21:30] 2026-01-09 16:20:57,549 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 08:21:30] 2026-01-09 16:20:57,624 | INFO     | 
[2026-01-09 08:21:30] 2026-01-09 16:20:57,625 | INFO     | job summary report
[2026-01-09 08:21:30] 2026-01-09 16:20:57,625 | INFO     | --------------------------------------------------
[2026-01-09 08:21:30] 2026-01-09 16:20:57,625 | INFO     | PanDA job id: 6963381546
[2026-01-09 08:21:30] 2026-01-09 16:20:57,625 | INFO     | task id: 47962010
[2026-01-09 08:21:30] 2026-01-09 16:20:57,625 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 08:18:16,440 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 08:21:30] 2026-01-09 16:20:57,626 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 08:21:30] 2026-01-09 16:20:57,626 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:21:30] 2026-01-09 16:20:57,626 | INFO     | pilot state: failed 
[2026-01-09 08:21:30] 2026-01-09 16:20:57,626 | INFO     | transexitcode: 65
[2026-01-09 08:21:30] 2026-01-09 16:20:57,659 | INFO     | exeerrorcode: 65
[2026-01-09 08:21:30] 2026-01-09 16:20:57,659 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 08:21:30] 2026-01-09 16:20:57,659 | INFO     | exitcode: 65
[2026-01-09 08:21:30] 2026-01-09 16:20:57,659 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 08:21:30] 2026-01-09 16:20:57,659 | INFO     | cpuconsumptiontime: 52 s
[2026-01-09 08:21:30] 2026-01-09 16:20:57,659 | INFO     | nevents: 0
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | neventsw: 0
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | pid: 3633736
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | pgrp: 3633736
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | corecount: 8
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | event service: False
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | sizes: {0: 2284621, 11: 2284621, 14: 2284911, 23: 2284939, 325: 2310451, 326: 2310455, 327: 2314929, 328: 2314985, 477: 2315179}
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | --------------------------------------------------
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | 
[2026-01-09 08:21:30] 2026-01-09 16:20:57,660 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:21:30] 2026-01-09 16:20:57,789 | INFO     | job 6963381546 has completed (purged errors)
[2026-01-09 08:21:30] 2026-01-09 16:20:57,790 | INFO     | overall cleanup function is called
[2026-01-09 08:21:30] 2026-01-09 16:20:58,798 | INFO     | --- collectZombieJob: --- 10, [3633736]
[2026-01-09 08:21:30] 2026-01-09 16:20:58,798 | INFO     | zombie collector waiting for pid 3633736
[2026-01-09 08:21:30] 2026-01-09 16:20:58,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:21:30] 2026-01-09 16:20:58,798 | INFO     | collected zombie processes
[2026-01-09 08:21:30] 2026-01-09 16:20:58,798 | INFO     | will attempt to kill all subprocesses of pid=3633736
[2026-01-09 08:21:30] 2026-01-09 16:20:59,262 | INFO     | process IDs to be killed: [3633736] (in reverse order)
[2026-01-09 08:21:30] 2026-01-09 16:20:59,338 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:21:30] 2026-01-09 16:20:59,338 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:21:30] 2026-01-09 16:20:59,350 | INFO     | did not find any defunct processes belonging to 3633736
[2026-01-09 08:21:30] 2026-01-09 16:20:59,371 | INFO     | did not find any defunct processes belonging to 3633736
[2026-01-09 08:21:30] 2026-01-09 16:20:59,371 | INFO     | ready for new job
[2026-01-09 08:21:30] 2026-01-09 16:20:59,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:21:30] 2026-01-09 16:20:59,373 | INFO     | ***************************************
[2026-01-09 08:21:30] 2026-01-09 16:20:59,373 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:21:30] 2026-01-09 16:20:59,373 | INFO     | ***************************************
[2026-01-09 08:21:30] 2026-01-09 16:20:59,373 | INFO     | 
[2026-01-09 08:21:30] 2026-01-09 16:20:59,374 | INFO     | architecture information:
[2026-01-09 08:21:30] 2026-01-09 16:20:59,416 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:21:30] 2026-01-09 16:20:59,473 | INFO     | cat /etc/os-release:
[2026-01-09 08:21:30] NAME="CentOS Linux"
[2026-01-09 08:21:30] VERSION="7 (Core)"
[2026-01-09 08:21:30] ID="centos"
[2026-01-09 08:21:30] ID_LIKE="rhel fedora"
[2026-01-09 08:21:30] VERSION_ID="7"
[2026-01-09 08:21:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:21:30] ANSI_COLOR="0;31"
[2026-01-09 08:21:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:21:30] HOME_URL="https://www.centos.org/"
[2026-01-09 08:21:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:21:30] 
[2026-01-09 08:21:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:21:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:21:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:21:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:21:30] 
[2026-01-09 08:21:30] 2026-01-09 16:20:59,474 | INFO     | ***************************************
[2026-01-09 08:21:30] 2026-01-09 16:20:59,977 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 08:21:30] 2026-01-09 16:21:00,105 | INFO     | sufficient remaining disk space (1045364211712 B)
[2026-01-09 08:21:30] 2026-01-09 16:21:00,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:21:30] 2026-01-09 16:21:00,106 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:21:30] 2026-01-09 16:21:00,106 | INFO     | update_server=False
[2026-01-09 08:21:30] 2026-01-09 16:21:00,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:21:30] 2026-01-09 16:21:00,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:21:30] 2026-01-09 16:21:01,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:21:30] 2026-01-09 16:21:01,052 | INFO     | aborting loop
[2026-01-09 08:21:30] 2026-01-09 16:21:01,112 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:01,132 | INFO     | all data control threads have been joined
[2026-01-09 08:21:30] 2026-01-09 16:21:01,210 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:01,302 | INFO     | all payload control threads have been joined
[2026-01-09 08:21:30] 2026-01-09 16:21:01,615 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:01,755 | INFO     | all job control threads have been joined
[2026-01-09 08:21:30] 2026-01-09 16:21:01,763 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:01,922 | INFO     | [job] validate thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,058 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,138 | INFO     | [data] control thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,191 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,308 | INFO     | [payload] control thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,448 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,452 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,453 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,456 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:02,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:21:30] 2026-01-09 16:21:02,761 | INFO     | [job] control thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:03,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:21:30] 2026-01-09 16:21:03,668 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:07,401 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:21:30] 2026-01-09 16:21:20,029 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:21:30] 2026-01-09 16:21:21,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140032445499200)>', '<ExcThread(monitor, started 140031746361088)>']
[2026-01-09 08:21:30] 2026-01-09 16:21:26,674 | INFO     | all workflow threads have been joined
[2026-01-09 08:21:30] 2026-01-09 16:21:26,675 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:21:30] 2026-01-09 16:21:26,675 | INFO     | traces error code: 0
[2026-01-09 08:21:30] 2026-01-09 16:21:26,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:21:30] 2026-01-09 16:21:29,789 | INFO     | PID=3627017 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:21:30] 2026-01-09 16:21:29,789 | INFO     | .. there are 26 such processes running
[2026-01-09 08:21:30] 2026-01-09 16:21:29,790 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:21:30] 2026-01-09 16:21:29,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:21:30] 2026-01-09 16:21:29,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:21:30] 2026-01-09 16:21:29,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:21:30] 2026-01-09 16:21:29,790 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 08:21:30] 2026-01-09 16:21:29,790 | INFO     | [monitor] control thread has ended
[2026-01-09 08:21:30] 2026-01-09 16:21:29,896 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:21:30] 2026-01-09 16:21:29,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:21:30] 2026-01-09 16:21:29,900 [wrapper] pilotpid: 3627017
[2026-01-09 08:21:30] 2026-01-09 16:21:29,902 [wrapper] Pilot exit status: 0
[2026-01-09 08:21:30] 2026-01-09 16:21:29,913 [wrapper] pandaids: 6963381546
[2026-01-09 08:21:30] 2026-01-09 16:21:29,951 [wrapper] cleanup supervisor_pilot 3627023 3627018
[2026-01-09 08:21:30] 2026-01-09 16:21:29,953 [wrapper] Test setup, not cleaning
[2026-01-09 08:21:30] 2026-01-09 16:21:29,955 [wrapper] apfmon messages muted
[2026-01-09 08:21:30] 2026-01-09 16:21:29,957 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:21:30] 2026-01-09 16:21:29,961 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:21:30]  *** Error codes and diagnostics ***
[2026-01-09 08:21:30]     "exeErrorCode": 65,
[2026-01-09 08:21:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 08:21:30]     "pilotErrorCode": 1305,
[2026-01-09 08:21:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 08:21:30]  *** Listing of results directory ***
[2026-01-09 08:21:30] total 386644
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:13 pilot3.tar.gz
[2026-01-09 08:21:30] -rwx------. 1 boinc boinc     36322 Jan  8 23:15 runpilot2-wrapper.sh
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:16 queuedata.json
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:21:30] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:11 run_atlas
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:11 job.xml
[2026-01-09 08:21:30] -rw-r--r--. 2 boinc boinc 391647796 Jan  9 08:11 EVNT.47962006._000113.pool.root.1
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc      6444 Jan  9 08:11 init_data.xml
[2026-01-09 08:21:30] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:11 start_atlas.sh
[2026-01-09 08:21:30] drwxrwx--x. 2 boinc boinc      4096 Jan  9 08:11 shared
[2026-01-09 08:21:30] -rw-r--r--. 2 boinc boinc    592614 Jan  9 08:11 input.tar.gz
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:11 boinc_lockfile
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc      2893 Jan  9 08:11 pandaJob.out
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc    989377 Jan  9 08:12 agis_schedconf.cvmfs.json
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc   1516240 Jan  9 08:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:21:30] drwx------. 5 boinc boinc      4096 Jan  9 08:12 pilot3
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc       524 Jan  9 08:17 boinc_task_state.xml
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc       993 Jan  9 08:18 memory_monitor_summary.json
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc     51451 Jan  9 08:18 log.47962010._001656.job.log.tgz.1
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc     10331 Jan  9 08:20 heartbeat.json
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:21 boinc_mmap_file
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc        23 Jan  9 08:21 wrapper_checkpoint.txt
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc        95 Jan  9 08:21 pilot_heartbeat.json
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc       893 Jan  9 08:21 pilotlog.txt
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc    128572 Jan  9 08:21 log.47962010._001656.job.log.1
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc       186 Jan  9 08:21 output.list
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:21 runtime_log
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc    204800 Jan  9 08:21 result.tar.gz
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc       646 Jan  9 08:21 wyQODmKtLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoXmKDmLSEj0n.diag
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc      8634 Jan  9 08:21 runtime_log.err
[2026-01-09 08:21:30] -rw-r--r--. 1 boinc boinc     22446 Jan  9 08:21 stderr.txt
[2026-01-09 08:21:30] No HITS result produced
[2026-01-09 08:21:30]  *** Contents of shared directory: ***
[2026-01-09 08:21:30] total 383272
[2026-01-09 08:21:30] -rw-r--r--. 2 boinc boinc 391647796 Jan  9 08:11 ATLAS.root_0
[2026-01-09 08:21:30] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:11 start_atlas.sh
[2026-01-09 08:21:30] -rw-r--r--. 2 boinc boinc    592614 Jan  9 08:11 input.tar.gz
[2026-01-09 08:21:30] -rw-------. 1 boinc boinc    204800 Jan  9 08:21 result.tar.gz
08:21:31 (3623278): run_atlas exited; CPU time 60.504255
08:21:31 (3623278): called boinc_finish(0)

</stderr_txt>
]]>

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