Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:36:32 (4065990): wrapper (7.7.26015): starting
17:36:32 (4065990): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:36:32] Arguments: --nthreads 8
[2026-01-09 17:36:32] Threads: 8
[2026-01-09 17:36:32] Checking for CVMFS
[2026-01-09 17:36:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:36:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:36:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:36:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:36:33] 2.13.3.0 7069 24150 256876 154959 2 349 28533161 40960001 12783 16776704 0 36749505 99.825 48567151 31801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:36:33] CVMFS is ok
[2026-01-09 17:36:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:36:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:36:33] Further information can be found at the LHC@home message board.
[2026-01-09 17:36:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:36:33] Checking for apptainer binary...
[2026-01-09 17:36:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:36:33] Running /usr/bin/apptainer --version
[2026-01-09 17:36:33] apptainer version 1.4.5-2.el9
[2026-01-09 17:36:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:36:33] c-210-35-3.aglt2.org
[2026-01-09 17:36:33] apptainer works
[2026-01-09 17:36:33] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:36:33] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:36:33] Starting ATLAS job with PandaID=6963383823
[2026-01-09 17:36:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:09:19 (171859): wrapper (7.7.26015): starting
19:09:19 (171859): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 19:09:19] Arguments: --nthreads 11
[2026-01-09 19:09:19] Threads: 11
[2026-01-09 19:09:19] This job has been restarted, cleaning up previous attempt
[2026-01-09 19:09:19] Checking for CVMFS
[2026-01-09 19:09:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:09:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:09:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:09:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:09:21] 2.13.3.0 7069 24243 250240 154961 1 71 32002365 40960001 12003 16776704 0 36964579 99.824 48806136 31799 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:09:21] CVMFS is ok
[2026-01-09 19:09:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:09:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:09:21] Further information can be found at the LHC@home message board.
[2026-01-09 19:09:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:09:21] Checking for apptainer binary...
[2026-01-09 19:09:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:09:21] Running /usr/bin/apptainer --version
[2026-01-09 19:09:21] apptainer version 1.4.5-2.el9
[2026-01-09 19:09:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:09:21] c-210-35-3.aglt2.org
[2026-01-09 19:09:21] apptainer works
[2026-01-09 19:09:21] Set ATHENA_PROC_NUMBER=11
[2026-01-09 19:09:21] Set ATHENA_CORE_NUMBER=11
[2026-01-09 19:09:21] Starting ATLAS job with PandaID=6963383823
[2026-01-09 19:09:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:28:03]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:28:03] 2026-01-11 06:27:01,331 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 01:28:03] 2026-01-11 06:27:01,334 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2907.4830892857144
[2026-01-11 01:28:03] 2026-01-11 06:27:01,342 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963383823/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,342 | INFO     | extracted standard info from prmon json
[2026-01-11 01:28:03] 2026-01-11 06:27:01,342 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 01:28:03] 2026-01-11 06:27:01,343 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 01:28:03] 2026-01-11 06:27:01,368 | INFO     | fitting pss+swap vs Time
[2026-01-11 01:28:03] 2026-01-11 06:27:01,370 | INFO     | sum of square deviations: 1769545219675.7517
[2026-01-11 01:28:03] 2026-01-11 06:27:01,427 | INFO     | sum of deviations: 11580706474237.957
[2026-01-11 01:28:03] 2026-01-11 06:27:01,427 | INFO     | mean x: 1768058314.6754336
[2026-01-11 01:28:03] 2026-01-11 06:27:01,427 | INFO     | mean y: 3379284.279238948
[2026-01-11 01:28:03] 2026-01-11 06:27:01,428 | INFO     | intersect: -11567596209.268145
[2026-01-11 01:28:03] 2026-01-11 06:27:01,430 | INFO     | chi2: 8.071611363549556
[2026-01-11 01:28:03] 2026-01-11 06:27:01,432 | INFO     | sum of square deviations: 1754735369480.2607
[2026-01-11 01:28:03] 2026-01-11 06:27:01,488 | INFO     | sum of deviations: 12247291446954.768
[2026-01-11 01:28:03] 2026-01-11 06:27:01,488 | INFO     | mean x: 1768058162.184624
[2026-01-11 01:28:03] 2026-01-11 06:27:01,489 | INFO     | mean y: 3386145.620650954
[2026-01-11 01:28:03] 2026-01-11 06:27:01,489 | INFO     | intersect: -12336892613.253422
[2026-01-11 01:28:03] 2026-01-11 06:27:01,491 | INFO     | chi2: 5.020581592329174
[2026-01-11 01:28:03] 2026-01-11 06:27:01,491 | INFO     | current chi2=5.020581592329174 (change=37.79951280853873 %)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,493 | INFO     | sum of square deviations: 1740007426390.9058
[2026-01-11 01:28:03] 2026-01-11 06:27:01,510 | INFO     | monitor loop #6653: job 0:6963383823 is in state 'finished'
[2026-01-11 01:28:03] 2026-01-11 06:27:01,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,552 | INFO     | sum of deviations: 12378627791132.686
[2026-01-11 01:28:03] 2026-01-11 06:27:01,552 | INFO     | mean x: 1768058009.6888013
[2026-01-11 01:28:03] 2026-01-11 06:27:01,552 | INFO     | mean y: 3387504.321328081
[2026-01-11 01:28:03] 2026-01-11 06:27:01,552 | INFO     | intersect: -12574795601.749886
[2026-01-11 01:28:03] 2026-01-11 06:27:01,554 | INFO     | chi2: 4.731550992247911
[2026-01-11 01:28:03] 2026-01-11 06:27:01,554 | INFO     | current chi2=4.731550992247911 (change=5.756914707309332 %)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,554 | INFO     | right removable region: 1776
[2026-01-11 01:28:03] 2026-01-11 06:27:01,556 | INFO     | sum of square deviations: 1754731580515.5188
[2026-01-11 01:28:03] 2026-01-11 06:27:01,613 | INFO     | sum of deviations: 10828345347214.941
[2026-01-11 01:28:03] 2026-01-11 06:27:01,613 | INFO     | mean x: 1768058467.1857464
[2026-01-11 01:28:03] 2026-01-11 06:27:01,613 | INFO     | mean y: 3387028.628507295
[2026-01-11 01:28:03] 2026-01-11 06:27:01,613 | INFO     | intersect: -10907197752.167507
[2026-01-11 01:28:03] 2026-01-11 06:27:01,615 | INFO     | chi2: 4.838491903682059
[2026-01-11 01:28:03] 2026-01-11 06:27:01,615 | INFO     | current chi2=4.838491903682059 (change=40.05544016239288 %)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,617 | INFO     | sum of square deviations: 1740001369557.8535
[2026-01-11 01:28:03] 2026-01-11 06:27:01,673 | INFO     | sum of deviations: 10468910102990.393
[2026-01-11 01:28:03] 2026-01-11 06:27:01,674 | INFO     | mean x: 1768058619.6933033
[2026-01-11 01:28:03] 2026-01-11 06:27:01,674 | INFO     | mean y: 3390747.51997749
[2026-01-11 01:28:03] 2026-01-11 06:27:01,674 | INFO     | intersect: -10634328894.671972
[2026-01-11 01:28:03] 2026-01-11 06:27:01,676 | INFO     | chi2: 4.122964318491748
[2026-01-11 01:28:03] 2026-01-11 06:27:01,676 | INFO     | current chi2=4.122964318491748 (change=14.788235661731697 %)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,676 | INFO     | left removable region: 20
[2026-01-11 01:28:03] 2026-01-11 06:27:01,678 | INFO     | sum of square deviations: 1679040557339.151
[2026-01-11 01:28:03] 2026-01-11 06:27:01,733 | INFO     | sum of deviations: 10876173573724.033
[2026-01-11 01:28:03] 2026-01-11 06:27:01,733 | INFO     | mean x: 1768058589.2198179
[2026-01-11 01:28:03] 2026-01-11 06:27:01,733 | INFO     | mean y: 3403121.349658314
[2026-01-11 01:28:03] 2026-01-11 06:27:01,733 | INFO     | intersect: -11449394740.39023
[2026-01-11 01:28:03] 2026-01-11 06:27:01,735 | INFO     | chi2: 0.615918783866197
[2026-01-11 01:28:03] 2026-01-11 06:27:01,736 | INFO     | current memory leak: 6.48 B/s (using 1756 data points, chi2=0.62)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,737 | INFO     | could have reported an average CPU frequency of 2941 MHz (63 samples)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | ..............................
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | . Timing measurements:
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | . get job = 0 s
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | . initial setup = 1 s
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | . payload setup = 13 s
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | . stage-in = 0 s
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | . payload execution = 108985 s
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | . stage-out = 3 s
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | . log creation = 0 s
[2026-01-11 01:28:03] 2026-01-11 06:27:01,738 | INFO     | ..............................
[2026-01-11 01:28:03] 2026-01-11 06:27:01,833 | INFO     | 
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | job summary report
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | --------------------------------------------------
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | PanDA job id: 6963383823
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | task id: 47962010
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | errors: (none)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | pilot state: finished 
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | transexitcode: 0
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | exeerrorcode: 0
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | exeerrordiag: 
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | exitcode: 0
[2026-01-11 01:28:03] 2026-01-11 06:27:01,834 | INFO     | exitmsg: OK
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | cpuconsumptiontime: 261124 s
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | nevents: 900
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | neventsw: 0
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | pid: 203934
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | pgrp: 203934
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | corecount: 11
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | event service: False
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | sizes: {0: 2284622, 1: 2284622, 10: 2284912, 12: 2284940, 109002: 2360275, 109006: 2369453, 109012: 2369643}
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | --------------------------------------------------
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | 
[2026-01-11 01:28:03] 2026-01-11 06:27:01,835 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 01:28:03] 2026-01-11 06:27:01,857 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | job 6963383823 has completed (purged errors)
[2026-01-11 01:28:03] 2026-01-11 06:27:01,859 | INFO     | overall cleanup function is called
[2026-01-11 01:28:03] 2026-01-11 06:27:02,877 | INFO     | --- collectZombieJob: --- 10, [203934]
[2026-01-11 01:28:03] 2026-01-11 06:27:02,877 | INFO     | zombie collector waiting for pid 203934
[2026-01-11 01:28:03] 2026-01-11 06:27:02,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 01:28:03] 2026-01-11 06:27:02,877 | INFO     | collected zombie processes
[2026-01-11 01:28:03] 2026-01-11 06:27:02,877 | INFO     | will attempt to kill all subprocesses of pid=203934
[2026-01-11 01:28:03] 2026-01-11 06:27:03,172 | INFO     | process IDs to be killed: [203934] (in reverse order)
[2026-01-11 01:28:03] 2026-01-11 06:27:03,272 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 01:28:03] 2026-01-11 06:27:03,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 01:28:03] 2026-01-11 06:27:03,284 | INFO     | did not find any defunct processes belonging to 203934
[2026-01-11 01:28:03] 2026-01-11 06:27:03,295 | INFO     | did not find any defunct processes belonging to 203934
[2026-01-11 01:28:03] 2026-01-11 06:27:03,296 | INFO     | ready for new job
[2026-01-11 01:28:03] 2026-01-11 06:27:03,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 01:28:03] 2026-01-11 06:27:03,303 | INFO     | ***************************************
[2026-01-11 01:28:03] 2026-01-11 06:27:03,303 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 01:28:03] 2026-01-11 06:27:03,304 | INFO     | ***************************************
[2026-01-11 01:28:03] 2026-01-11 06:27:03,304 | INFO     | 
[2026-01-11 01:28:03] 2026-01-11 06:27:03,307 | INFO     | architecture information:
[2026-01-11 01:28:03] 2026-01-11 06:27:03,308 | INFO     | executing command: cat /etc/os-release
[2026-01-11 01:28:03] 2026-01-11 06:27:03,324 | INFO     | cat /etc/os-release:
[2026-01-11 01:28:03] NAME="CentOS Linux"
[2026-01-11 01:28:03] VERSION="7 (Core)"
[2026-01-11 01:28:03] ID="centos"
[2026-01-11 01:28:03] ID_LIKE="rhel fedora"
[2026-01-11 01:28:03] VERSION_ID="7"
[2026-01-11 01:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:28:03] ANSI_COLOR="0;31"
[2026-01-11 01:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:28:03] HOME_URL="https://www.centos.org/"
[2026-01-11 01:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:28:03] 
[2026-01-11 01:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:28:03] 
[2026-01-11 01:28:03] 2026-01-11 06:27:03,324 | INFO     | ***************************************
[2026-01-11 01:28:03] 2026-01-11 06:27:03,827 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 01:28:03] 2026-01-11 06:27:03,845 | INFO     | sufficient remaining disk space (74534879232 B)
[2026-01-11 01:28:03] 2026-01-11 06:27:03,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:28:03] 2026-01-11 06:27:03,846 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:28:03] 2026-01-11 06:27:03,846 | INFO     | update_server=False
[2026-01-11 01:28:03] 2026-01-11 06:27:03,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:28:03] 2026-01-11 06:27:03,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:28:03] 2026-01-11 06:27:04,032 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 01:28:03] 2026-01-11 06:27:04,033 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 01:28:03] 2026-01-11 06:27:04,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:28:03] 2026-01-11 06:27:04,033 | INFO     | will abort loop
[2026-01-11 01:28:03] 2026-01-11 06:27:04,428 | INFO     | all data control threads have been joined
[2026-01-11 01:28:03] 2026-01-11 06:27:04,455 | INFO     | all payload control threads have been joined
[2026-01-11 01:28:03] 2026-01-11 06:27:04,700 | INFO     | all job control threads have been joined
[2026-01-11 01:28:03] 2026-01-11 06:27:04,851 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:04,865 | INFO     | [job] validate thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:04,880 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:04,892 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:04,931 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:05,038 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:05,145 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:05,433 | INFO     | [data] control thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:05,460 | INFO     | [payload] control thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:05,705 | INFO     | [job] control thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:05,792 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:05,852 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:05,852 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:06,066 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:06,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:28:03] 2026-01-11 06:27:06,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:28:03] 2026-01-11 06:27:07,851 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:10,273 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:28:03] 2026-01-11 06:27:34,210 | INFO     | PID=182228 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 01:28:03] 2026-01-11 06:27:34,211 | INFO     | .. there are 15 such processes running
[2026-01-11 01:28:03] 2026-01-11 06:27:34,212 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:28:03] 2026-01-11 06:27:34,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:28:03] 2026-01-11 06:27:34,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:28:03] 2026-01-11 06:27:57,843 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:28:03] 2026-01-11 06:27:58,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260581111616)>', '<ExcThread(monitor, started 140260243650304)>']
[2026-01-11 01:28:03] 2026-01-11 06:27:59,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:28:03] 2026-01-11 06:27:59,352 | INFO     | [monitor] control thread has ended
[2026-01-11 01:28:03] 2026-01-11 06:28:03,500 | INFO     | all workflow threads have been joined
[2026-01-11 01:28:03] 2026-01-11 06:28:03,500 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:28:03] 2026-01-11 06:28:03,501 | INFO     | traces error code: 0
[2026-01-11 01:28:03] 2026-01-11 06:28:03,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:28:03] 2026-01-11 06:28:03,692 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:28:03] 2026-01-11 06:28:03,695 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:28:03] 2026-01-11 06:28:03,697 [wrapper] pilotpid: 182228
[2026-01-11 01:28:03] 2026-01-11 06:28:03,701 [wrapper] Pilot exit status: 0
[2026-01-11 01:28:03] 2026-01-11 06:28:03,723 [wrapper] pandaids: 6963383823 6963383823
[2026-01-11 01:28:03] 2026-01-11 06:28:03,793 [wrapper] cleanup supervisor_pilot  431680 182229
[2026-01-11 01:28:03] 2026-01-11 06:28:03,797 [wrapper] Test setup, not cleaning
[2026-01-11 01:28:03] 2026-01-11 06:28:03,800 [wrapper] apfmon messages muted
[2026-01-11 01:28:03] 2026-01-11 06:28:03,802 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:28:03] 2026-01-11 06:28:03,805 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:28:03]  *** Error codes and diagnostics ***
[2026-01-11 01:28:03]     "exeErrorCode": 0,
[2026-01-11 01:28:03]     "exeErrorDiag": "",
[2026-01-11 01:28:03]     "pilotErrorCode": 0,
[2026-01-11 01:28:03]     "pilotErrorDiag": "",
[2026-01-11 01:28:03]  *** Listing of results directory ***
[2026-01-11 01:28:03] total 1584732
[2026-01-11 01:28:03] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-11 01:28:03] -rwx------. 1 boincer umatlas     36322 Jan  9 02:15 runpilot2-wrapper.sh
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:28:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:36 run_atlas
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:36 job.xml
[2026-01-11 01:28:03] -rw-r--r--. 3 boincer umatlas 393319043 Jan  9 17:36 EVNT.47962006._000127.pool.root.1
[2026-01-11 01:28:03] -rw-r--r--. 3 boincer umatlas 393319043 Jan  9 17:36 ATLAS.root_0
[2026-01-11 01:28:03] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:36 shared
[2026-01-11 01:28:03] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 17:36 input.tar.gz
[2026-01-11 01:28:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:36 start_atlas.sh
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:36 boinc_lockfile
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 19:09 pandaJob.out
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas        57 Jan  9 19:09 setup.sh.local
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas    989374 Jan  9 19:09 agis_schedconf.cvmfs.json
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas       534 Jan 11 01:15 boinc_task_state.xml
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas      6844 Jan 11 01:20 init_data.xml
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas 798412088 Jan 11 01:26 HITS.47962010._001811.pool.root.1
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas      1070 Jan 11 01:26 memory_monitor_summary.json
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas   1516240 Jan 11 01:26 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas   3043421 Jan 11 01:26 log.47962010._001811.job.log.tgz.1
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas      8652 Jan 11 01:27 heartbeat.json
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas        96 Jan 11 01:27 pilot_heartbeat.json
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 01:27 boinc_mmap_file
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas        30 Jan 11 01:27 wrapper_checkpoint.txt
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas      5009 Jan 11 01:28 pilotlog.txt
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas  13851180 Jan 11 01:28 log.47962010._001811.job.log.1
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas       353 Jan 11 01:28 output.list
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas       620 Jan 11 01:28 runtime_log
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas  16916480 Jan 11 01:28 result.tar.gz
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas      9441 Jan 11 01:28 runtime_log.err
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas       794 Jan 11 01:28 PyLLDmUtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOMhKDmlLyp3m.diag
[2026-01-11 01:28:03] -rw-r--r--. 1 boincer umatlas     23377 Jan 11 01:28 stderr.txt
[2026-01-11 01:28:03] HITS file was successfully produced:
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas 798412088 Jan 11 01:26 shared/HITS.pool.root.1
[2026-01-11 01:28:03]  *** Contents of shared directory: ***
[2026-01-11 01:28:03] total 1180924
[2026-01-11 01:28:03] -rw-r--r--. 3 boincer umatlas 393319043 Jan  9 17:36 ATLAS.root_0
[2026-01-11 01:28:03] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 17:36 input.tar.gz
[2026-01-11 01:28:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:36 start_atlas.sh
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas 798412088 Jan 11 01:26 HITS.pool.root.1
[2026-01-11 01:28:03] -rw-------. 1 boincer umatlas  16916480 Jan 11 01:28 result.tar.gz
01:28:25 (171859): run_atlas exited; CPU time 262000.128950
01:28:25 (171859): called boinc_finish(0)

</stderr_txt>
]]>

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