Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:59:24 (6995): wrapper (7.7.26015): starting
21:59:24 (6995): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:59:24] Arguments: --nthreads 8
[2026-01-09 21:59:24] Threads: 8
[2026-01-09 21:59:24] Checking for CVMFS
[2026-01-09 21:59:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:59:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:59:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:59:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:59:24] 2.11.2.0 27806 35909 96212 154956 1 57 14064950 25165825 0 130560 0 18300128 99.824 10701863 3931 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 21:59:24] CVMFS is ok
[2026-01-09 21:59:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:59:24] Checking for apptainer binary...
[2026-01-09 21:59:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:59:24] Running /usr/bin/apptainer --version
[2026-01-09 21:59:24] apptainer version 1.3.2-1.el7
[2026-01-09 21:59:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:59:26] cg-vwn467.simple-grid.lan
[2026-01-09 21:59:26] apptainer works
[2026-01-09 21:59:26] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:59:26] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:59:26] Starting ATLAS job with PandaID=6963381842
[2026-01-09 21:59:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:38:22]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:38:22] 2026-01-10 20:37:34,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:38:22] 2026-01-10 20:37:34,251 | INFO     | time since job start (85074s) is within the limit (349056.0s)
[2026-01-10 21:38:22] 2026-01-10 20:37:36,258 | INFO     | time since job start (85076s) is within the limit (349056.0s)
[2026-01-10 21:38:22] 2026-01-10 20:37:36,683 | INFO     | monitor loop #5697: job 0:6963381842 is in state 'finished'
[2026-01-10 21:38:22] 2026-01-10 20:37:36,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:38:22] 2026-01-10 20:37:37,355 | INFO     | PID=10718 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 21:38:22] 2026-01-10 20:37:37,355 | INFO     | .. there are 2 such processes running
[2026-01-10 21:38:22] 2026-01-10 20:37:38,356 | INFO     | time since job start (85078s) is within the limit (349056.0s)
[2026-01-10 21:38:22] 2026-01-10 20:37:39,192 | INFO     | monitor loop #5698: job 0:6963381842 is in state 'finished'
[2026-01-10 21:38:22] 2026-01-10 20:37:39,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:38:22] 2026-01-10 20:37:40,363 | INFO     | time since job start (85080s) is within the limit (349056.0s)
[2026-01-10 21:38:22] 2026-01-10 20:37:41,706 | INFO     | monitor loop #5699: job 0:6963381842 is in state 'finished'
[2026-01-10 21:38:22] 2026-01-10 20:37:41,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:38:22] 2026-01-10 20:37:42,370 | INFO     | time since job start (85082s) is within the limit (349056.0s)
[2026-01-10 21:38:22] 2026-01-10 20:37:43,964 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 21:38:22] 2026-01-10 20:37:43,965 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-10 21:38:22] 2026-01-10 20:37:43,966 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963381842/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:38:22] 2026-01-10 20:37:43,967 | INFO     | extracted standard info from prmon json
[2026-01-10 21:38:22] 2026-01-10 20:37:43,967 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:38:22] 2026-01-10 20:37:43,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:38:22] 2026-01-10 20:37:44,000 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:38:22] 2026-01-10 20:37:44,002 | INFO     | sum of square deviations: 838169352482.9812
[2026-01-10 21:38:22] 2026-01-10 20:37:44,102 | INFO     | sum of deviations: 1739528716299.964
[2026-01-10 21:38:22] 2026-01-10 20:37:44,102 | INFO     | mean x: 1768034866.9964106
[2026-01-10 21:38:22] 2026-01-10 20:37:44,102 | INFO     | mean y: 2848099.992103374
[2026-01-10 21:38:22] 2026-01-10 20:37:44,103 | INFO     | intersect: -3666514676.69364
[2026-01-10 21:38:22] 2026-01-10 20:37:44,104 | INFO     | chi2: 16.117712710457035
[2026-01-10 21:38:22] 2026-01-10 20:37:44,106 | INFO     | sum of square deviations: 829176621153.0
[2026-01-10 21:38:22] 2026-01-10 20:37:44,174 | INFO     | sum of deviations: 2211872975338.002
[2026-01-10 21:38:22] 2026-01-10 20:37:44,174 | INFO     | mean x: 1768034714.5
[2026-01-10 21:38:22] 2026-01-10 20:37:44,174 | INFO     | mean y: 2856109.6340057636
[2026-01-10 21:38:22] 2026-01-10 20:37:44,175 | INFO     | intersect: -4713471033.097136
[2026-01-10 21:38:22] 2026-01-10 20:37:44,176 | INFO     | chi2: 12.73264103074909
[2026-01-10 21:38:22] 2026-01-10 20:37:44,176 | INFO     | current chi2=12.73264103074909 (change=21.00218399793005 %)
[2026-01-10 21:38:22] 2026-01-10 20:37:44,176 | INFO     | right removable region: 1387
[2026-01-10 21:38:22] 2026-01-10 20:37:44,178 | INFO     | sum of square deviations: 829175774473.0
[2026-01-10 21:38:22] 2026-01-10 20:37:44,224 | INFO     | monitor loop #5700: job 0:6963381842 is in state 'finished'
[2026-01-10 21:38:22] 2026-01-10 20:37:44,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:38:22] 2026-01-10 20:37:44,254 | INFO     | sum of deviations: 1352228730247.0
[2026-01-10 21:38:22] 2026-01-10 20:37:44,254 | INFO     | mean x: 1768035019.5
[2026-01-10 21:38:22] 2026-01-10 20:37:44,255 | INFO     | mean y: 2854661.413544669
[2026-01-10 21:38:22] 2026-01-10 20:37:44,255 | INFO     | intersect: -2880475777.1418147
[2026-01-10 21:38:22] 2026-01-10 20:37:44,256 | INFO     | chi2: 13.771217388462142
[2026-01-10 21:38:22] 2026-01-10 20:37:44,256 | INFO     | current chi2=13.771217388462142 (change=14.558488317467688 %)
[2026-01-10 21:38:22] 2026-01-10 20:37:44,256 | INFO     | left removable region: 10
[2026-01-10 21:38:22] 2026-01-10 20:37:44,258 | INFO     | sum of square deviations: 809618008814.9409
[2026-01-10 21:38:22] 2026-01-10 20:37:44,322 | INFO     | sum of deviations: 1843227147709.2224
[2026-01-10 21:38:22] 2026-01-10 20:37:44,323 | INFO     | mean x: 1768034989.006536
[2026-01-10 21:38:22] 2026-01-10 20:37:44,323 | INFO     | mean y: 2865912.75308642
[2026-01-10 21:38:22] 2026-01-10 20:37:44,323 | INFO     | intersect: -4022353455.337239
[2026-01-10 21:38:22] 2026-01-10 20:37:44,325 | INFO     | chi2: 9.549841949398584
[2026-01-10 21:38:22] 2026-01-10 20:37:44,325 | INFO     | current memory leak: 2.28 B/s (using 1377 data points, chi2=9.55)
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | could have reported an average CPU frequency of 2250 MHz (47 samples)
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | ..............................
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | . Timing measurements:
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | . get job = 0 s
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | . initial setup = 2 s
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | . payload setup = 7 s
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | . stage-in = 0 s
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | . payload execution = 84946 s
[2026-01-10 21:38:22] 2026-01-10 20:37:44,327 | INFO     | . stage-out = 5 s
[2026-01-10 21:38:22] 2026-01-10 20:37:44,328 | INFO     | . log creation = 2 s
[2026-01-10 21:38:22] 2026-01-10 20:37:44,328 | INFO     | ..............................
[2026-01-10 21:38:22] 2026-01-10 20:37:44,383 | INFO     | time since job start (85084s) is within the limit (349056.0s)
[2026-01-10 21:38:22] 2026-01-10 20:37:44,452 | INFO     | 
[2026-01-10 21:38:22] 2026-01-10 20:37:44,452 | INFO     | job summary report
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | --------------------------------------------------
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | PanDA job id: 6963381842
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | task id: 47962010
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | errors: (none)
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | pilot state: finished 
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | transexitcode: 0
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | exeerrorcode: 0
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | exeerrordiag: 
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | exitcode: 0
[2026-01-10 21:38:22] 2026-01-10 20:37:44,453 | INFO     | exitmsg: OK
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | cpuconsumptiontime: 342660 s
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | nevents: 900
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | neventsw: 0
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | pid: 17153
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | pgrp: 17153
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | corecount: 8
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | event service: False
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | sizes: {0: 2283796, 1: 2284652, 6: 2284914, 12: 2284942, 84957: 2345659, 84958: 2345658, 84964: 2354836, 84967: 2354892, 85068: 2355138}
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | --------------------------------------------------
[2026-01-10 21:38:22] 2026-01-10 20:37:44,454 | INFO     | 
[2026-01-10 21:38:22] 2026-01-10 20:37:44,455 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 21:38:22] 2026-01-10 20:37:44,997 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,998 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,998 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,998 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:44,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:45,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:45,000 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:38:22] 2026-01-10 20:37:45,000 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:45,000 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:38:22] 2026-01-10 20:37:45,000 | INFO     | job 6963381842 has completed (purged errors)
[2026-01-10 21:38:22] 2026-01-10 20:37:45,000 | INFO     | overall cleanup function is called
[2026-01-10 21:38:22] 2026-01-10 20:37:46,020 | INFO     | --- collectZombieJob: --- 10, [17153]
[2026-01-10 21:38:22] 2026-01-10 20:37:46,020 | INFO     | zombie collector waiting for pid 17153
[2026-01-10 21:38:22] 2026-01-10 20:37:46,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:38:22] 2026-01-10 20:37:46,021 | INFO     | collected zombie processes
[2026-01-10 21:38:22] 2026-01-10 20:37:46,021 | INFO     | will attempt to kill all subprocesses of pid=17153
[2026-01-10 21:38:22] 2026-01-10 20:37:46,107 | INFO     | process IDs to be killed: [17153] (in reverse order)
[2026-01-10 21:38:22] 2026-01-10 20:37:47,107 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:38:22] 2026-01-10 20:37:47,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:38:22] 2026-01-10 20:37:47,109 | INFO     | did not find any defunct processes belonging to 17153
[2026-01-10 21:38:22] 2026-01-10 20:37:47,110 | INFO     | did not find any defunct processes belonging to 17153
[2026-01-10 21:38:22] 2026-01-10 20:37:47,111 | INFO     | ready for new job
[2026-01-10 21:38:22] 2026-01-10 20:37:47,111 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:38:22] 2026-01-10 20:37:47,116 | INFO     | ***************************************
[2026-01-10 21:38:22] 2026-01-10 20:37:47,116 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:38:22] 2026-01-10 20:37:47,116 | INFO     | ***************************************
[2026-01-10 21:38:22] 2026-01-10 20:37:47,116 | INFO     | 
[2026-01-10 21:38:22] 2026-01-10 20:37:47,117 | INFO     | pilot is running in a VM
[2026-01-10 21:38:22] 2026-01-10 20:37:47,120 | INFO     | architecture information:
[2026-01-10 21:38:22] 2026-01-10 20:37:47,130 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:38:22] 2026-01-10 20:37:47,272 | INFO     | cat /etc/os-release:
[2026-01-10 21:38:22] NAME="CentOS Linux"
[2026-01-10 21:38:22] VERSION="7 (Core)"
[2026-01-10 21:38:22] ID="centos"
[2026-01-10 21:38:22] ID_LIKE="rhel fedora"
[2026-01-10 21:38:22] VERSION_ID="7"
[2026-01-10 21:38:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:38:22] ANSI_COLOR="0;31"
[2026-01-10 21:38:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:38:22] HOME_URL="https://www.centos.org/"
[2026-01-10 21:38:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:38:22] 
[2026-01-10 21:38:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:38:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:38:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:38:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:38:22] 
[2026-01-10 21:38:22] 2026-01-10 20:37:47,273 | INFO     | ***************************************
[2026-01-10 21:38:22] 2026-01-10 20:37:47,776 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 21:38:22] 2026-01-10 20:37:47,909 | INFO     | sufficient remaining disk space (495461597184 B)
[2026-01-10 21:38:22] 2026-01-10 20:37:47,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:38:22] 2026-01-10 20:37:47,909 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:38:22] 2026-01-10 20:37:47,909 | INFO     | update_server=False
[2026-01-10 21:38:22] 2026-01-10 20:37:47,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:38:22] 2026-01-10 20:37:47,910 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:38:22] 2026-01-10 20:37:47,910 | INFO     | aborting loop
[2026-01-10 21:38:22] 2026-01-10 20:37:48,251 | INFO     | all payload control threads have been joined
[2026-01-10 21:38:22] 2026-01-10 20:37:48,606 | INFO     | all job control threads have been joined
[2026-01-10 21:38:22] 2026-01-10 20:37:48,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:38:22] 2026-01-10 20:37:48,852 | INFO     | all data control threads have been joined
[2026-01-10 21:38:22] 2026-01-10 20:37:48,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:38:22] 2026-01-10 20:37:48,915 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:48,916 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,257 | INFO     | [payload] control thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,263 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:38:22] 2026-01-10 20:37:49,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,600 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,612 | INFO     | [job] control thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,756 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,758 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,858 | INFO     | [data] control thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:49,950 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:50,184 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:50,199 | INFO     | [job] validate thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:50,473 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:50,863 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:37:52,801 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:38:22] 2026-01-10 20:38:08,046 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:38:22] 2026-01-10 20:38:09,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552467425088)>', '<ExcThread(monitor, started 140552024598272)>']
[2026-01-10 21:38:22] 2026-01-10 20:38:14,051 | INFO     | all workflow threads have been joined
[2026-01-10 21:38:22] 2026-01-10 20:38:14,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:38:22] 2026-01-10 20:38:14,052 | INFO     | traces error code: 0
[2026-01-10 21:38:22] 2026-01-10 20:38:14,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:38:22] 2026-01-10 20:38:17,511 | INFO     | PID=10718 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 21:38:22] 2026-01-10 20:38:17,512 | INFO     | .. there are 2 such processes running
[2026-01-10 21:38:22] 2026-01-10 20:38:17,512 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:38:22] 2026-01-10 20:38:17,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:38:22] 2026-01-10 20:38:17,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:38:22] 2026-01-10 20:38:17,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:38:22] 2026-01-10 20:38:17,513 | INFO     | [monitor] control thread has ended
[2026-01-10 21:38:22] 2026-01-10 20:38:17,874 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:38:22] 2026-01-10 20:38:17,906 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:38:22] 2026-01-10 20:38:18,016 [wrapper] pilotpid: 10718
[2026-01-10 21:38:22] 2026-01-10 20:38:18,069 [wrapper] Pilot exit status: 0
[2026-01-10 21:38:22] 2026-01-10 20:38:18,502 [wrapper] pandaids: 6963381842
[2026-01-10 21:38:22] 2026-01-10 20:38:19,324 [wrapper] cleanup supervisor_pilot  5437 10719
[2026-01-10 21:38:22] 2026-01-10 20:38:19,432 [wrapper] Test setup, not cleaning
[2026-01-10 21:38:22] 2026-01-10 20:38:19,518 [wrapper] apfmon messages muted
[2026-01-10 21:38:22] 2026-01-10 20:38:19,543 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:38:22] 2026-01-10 20:38:19,601 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:38:22]  *** Error codes and diagnostics ***
[2026-01-10 21:38:22]     "exeErrorCode": 0,
[2026-01-10 21:38:22]     "exeErrorDiag": "",
[2026-01-10 21:38:22]     "pilotErrorCode": 0,
[2026-01-10 21:38:22]     "pilotErrorDiag": "",
[2026-01-10 21:38:22]  *** Listing of results directory ***
[2026-01-10 21:38:22] total 1204912
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 21:38:22] -rwx------. 1 boinc boinc     36322 Jan  9 08:15 runpilot2-wrapper.sh
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:16 queuedata.json
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc       100 Jan  9 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:38:22] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 21:59 run_atlas
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc       105 Jan  9 21:59 job.xml
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc      6390 Jan  9 21:59 init_data.xml
[2026-01-10 21:38:22] -rw-r--r--. 2 boinc boinc 392411395 Jan  9 21:59 EVNT.47962006._000125.pool.root.1
[2026-01-10 21:38:22] -rw-r--r--. 2 boinc boinc     15847 Jan  9 21:59 start_atlas.sh
[2026-01-10 21:38:22] drwxrwx--x. 2 boinc boinc        68 Jan  9 21:59 shared
[2026-01-10 21:38:22] -rw-r--r--. 2 boinc boinc    592614 Jan  9 21:59 input.tar.gz
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc         0 Jan  9 21:59 boinc_lockfile
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc      2893 Jan  9 21:59 pandaJob.out
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc    989381 Jan  9 21:59 agis_schedconf.cvmfs.json
[2026-01-10 21:38:22] drwx------. 5 boinc boinc      4096 Jan  9 21:59 pilot3
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc       533 Jan 10 21:10 boinc_task_state.xml
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc 809929688 Jan 10 21:34 HITS.47962010._001790.pool.root.1
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc      1034 Jan 10 21:35 memory_monitor_summary.json
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc   1516240 Jan 10 21:35 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc   2435835 Jan 10 21:35 log.47962010._001790.job.log.tgz.1
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc      8607 Jan 10 21:37 heartbeat.json
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc      8192 Jan 10 21:38 boinc_mmap_file
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc        29 Jan 10 21:38 wrapper_checkpoint.txt
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc        95 Jan 10 21:38 pilot_heartbeat.json
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc       820 Jan 10 21:38 pilotlog.txt
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc  11356228 Jan 10 21:38 log.47962010._001790.job.log.1
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc       353 Jan 10 21:38 output.list
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc       620 Jan 10 21:38 runtime_log
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc  13813760 Jan 10 21:38 result.tar.gz
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc       662 Jan 10 21:38 YRtKDmUtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFMhKDm5H4axm.diag
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc      8817 Jan 10 21:38 runtime_log.err
[2026-01-10 21:38:22] -rw-r--r--. 1 boinc boinc     21354 Jan 10 21:38 stderr.txt
[2026-01-10 21:38:22] HITS file was successfully produced:
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc 809929688 Jan 10 21:34 shared/HITS.pool.root.1
[2026-01-10 21:38:22]  *** Contents of shared directory: ***
[2026-01-10 21:38:22] total 1188252
[2026-01-10 21:38:22] -rw-r--r--. 2 boinc boinc 392411395 Jan  9 21:59 ATLAS.root_0
[2026-01-10 21:38:22] -rw-r--r--. 2 boinc boinc     15847 Jan  9 21:59 start_atlas.sh
[2026-01-10 21:38:22] -rw-r--r--. 2 boinc boinc    592614 Jan  9 21:59 input.tar.gz
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc 809929688 Jan 10 21:34 HITS.pool.root.1
[2026-01-10 21:38:22] -rw-------. 1 boinc boinc  13813760 Jan 10 21:38 result.tar.gz
21:38:24 (6995): run_atlas exited; CPU time 342928.474417
21:38:24 (6995): called boinc_finish(0)

</stderr_txt>
]]>

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