Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:56:33 (12669): wrapper (7.7.26015): starting
10:56:33 (12669): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 10:56:33] Arguments: --nthreads 12
[2026-01-09 10:56:33] Threads: 12
[2026-01-09 10:56:33] Checking for CVMFS
[2026-01-09 10:56:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:56:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:56:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:56:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:56:33] 2.11.2.0 3009 136516 99276 154948 3 59 12843994 20275200 1 130560 0 49557007 99.879 8101526 39488 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:56:33] CVMFS is ok
[2026-01-09 10:56:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:56:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:56:33] Further information can be found at the LHC@home message board.
[2026-01-09 10:56:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:56:33] Checking for apptainer binary...
[2026-01-09 10:56:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:56:33] Running /usr/bin/apptainer --version
[2026-01-09 10:56:33] apptainer version 1.3.2-1.el7
[2026-01-09 10:56:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:56:34] c-115-42.aglt2.org
[2026-01-09 10:56:34] apptainer works
[2026-01-09 10:56:34] Set ATHENA_PROC_NUMBER=12
[2026-01-09 10:56:34] Set ATHENA_CORE_NUMBER=12
[2026-01-09 10:56:34] Starting ATLAS job with PandaID=6963381685
[2026-01-09 10:56:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:00:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:00:36] 2026-01-09 22:59:57,481 | INFO     | time since job start (25388s) is within the limit (349056.0s)
[2026-01-09 18:00:36] 2026-01-09 22:59:57,481 | INFO     | 25390s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 18:00:36] 2026-01-09 22:59:57,658 | INFO     | monitor loop #1902: job 0:6963381685 is in state 'finished'
[2026-01-09 18:00:36] 2026-01-09 22:59:57,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,487 | INFO     | time since job start (25390s) is within the limit (349056.0s)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,597 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:00:36] 2026-01-09 22:59:59,601 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2026-01-09 18:00:36] 2026-01-09 22:59:59,604 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963381685/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,605 | INFO     | extracted standard info from prmon json
[2026-01-09 18:00:36] 2026-01-09 22:59:59,605 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:00:36] 2026-01-09 22:59:59,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:00:36] 2026-01-09 22:59:59,611 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:00:36] 2026-01-09 22:59:59,611 | INFO     | sum of square deviations: 22323294261.555157
[2026-01-09 18:00:36] 2026-01-09 22:59:59,614 | INFO     | sum of deviations: 424997575655.3707
[2026-01-09 18:00:36] 2026-01-09 22:59:59,615 | INFO     | mean x: 1767986895.6033654
[2026-01-09 18:00:36] 2026-01-09 22:59:59,615 | INFO     | mean y: 3438028.735576923
[2026-01-09 18:00:36] 2026-01-09 22:59:59,615 | INFO     | intersect: -33656027085.063877
[2026-01-09 18:00:36] 2026-01-09 22:59:59,615 | INFO     | chi2: 4.732618179567675
[2026-01-09 18:00:36] 2026-01-09 22:59:59,616 | INFO     | sum of square deviations: 21528018046.50131
[2026-01-09 18:00:36] 2026-01-09 22:59:59,619 | INFO     | sum of deviations: 555673655065.7219
[2026-01-09 18:00:36] 2026-01-09 22:59:59,619 | INFO     | mean x: 1767986743.1046228
[2026-01-09 18:00:36] 2026-01-09 22:59:59,619 | INFO     | mean y: 3463040.1459854012
[2026-01-09 18:00:36] 2026-01-09 22:59:59,619 | INFO     | intersect: -45631190996.58959
[2026-01-09 18:00:36] 2026-01-09 22:59:59,620 | INFO     | chi2: 2.5529502151325323
[2026-01-09 18:00:36] 2026-01-09 22:59:59,620 | INFO     | current chi2=2.5529502151325323 (change=46.056281781731556 %)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,620 | INFO     | sum of square deviations: 20751858468.945835
[2026-01-09 18:00:36] 2026-01-09 22:59:59,624 | INFO     | sum of deviations: 574755430830.6794
[2026-01-09 18:00:36] 2026-01-09 22:59:59,624 | INFO     | mean x: 1767986590.6059113
[2026-01-09 18:00:36] 2026-01-09 22:59:59,624 | INFO     | mean y: 3466751.7167487685
[2026-01-09 18:00:36] 2026-01-09 22:59:59,624 | INFO     | intersect: -48963708699.44582
[2026-01-09 18:00:36] 2026-01-09 22:59:59,624 | INFO     | chi2: 2.3503290520024493
[2026-01-09 18:00:36] 2026-01-09 22:59:59,624 | INFO     | current chi2=2.3503290520024493 (change=7.936745571028074 %)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,625 | INFO     | right removable region: 405
[2026-01-09 18:00:36] 2026-01-09 22:59:59,625 | INFO     | sum of square deviations: 21527991816.501312
[2026-01-09 18:00:36] 2026-01-09 22:59:59,628 | INFO     | sum of deviations: 296761831379.5304
[2026-01-09 18:00:36] 2026-01-09 22:59:59,628 | INFO     | mean x: 1767987048.1046228
[2026-01-09 18:00:36] 2026-01-09 22:59:59,628 | INFO     | mean y: 3462526.615571776
[2026-01-09 18:00:36] 2026-01-09 22:59:59,629 | INFO     | intersect: -24368112802.981815
[2026-01-09 18:00:36] 2026-01-09 22:59:59,629 | INFO     | chi2: 2.5279945853856787
[2026-01-09 18:00:36] 2026-01-09 22:59:59,629 | INFO     | current chi2=2.5279945853856787 (change=46.58359306694352 %)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,629 | INFO     | sum of square deviations: 20751806008.945835
[2026-01-09 18:00:36] 2026-01-09 22:59:59,633 | INFO     | sum of deviations: 262093625660.82257
[2026-01-09 18:00:36] 2026-01-09 22:59:59,633 | INFO     | mean x: 1767987200.6059113
[2026-01-09 18:00:36] 2026-01-09 22:59:59,633 | INFO     | mean y: 3469332.0738916257
[2026-01-09 18:00:36] 2026-01-09 22:59:59,633 | INFO     | intersect: -22326065520.40955
[2026-01-09 18:00:36] 2026-01-09 22:59:59,633 | INFO     | chi2: 2.468946360503822
[2026-01-09 18:00:36] 2026-01-09 22:59:59,634 | INFO     | current chi2=2.468946360503822 (change=2.335773392206371 %)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,634 | INFO     | left removable region: 20
[2026-01-09 18:00:36] 2026-01-09 22:59:59,634 | INFO     | sum of square deviations: 17695388534.197403
[2026-01-09 18:00:36] 2026-01-09 22:59:59,637 | INFO     | sum of deviations: 369724274745.727
[2026-01-09 18:00:36] 2026-01-09 22:59:59,637 | INFO     | mean x: 1767987170.1116884
[2026-01-09 18:00:36] 2026-01-09 22:59:59,637 | INFO     | mean y: 3507761.727272727
[2026-01-09 18:00:36] 2026-01-09 22:59:59,637 | INFO     | intersect: -36936499120.06806
[2026-01-09 18:00:36] 2026-01-09 22:59:59,638 | INFO     | chi2: 0.053931722067410134
[2026-01-09 18:00:36] 2026-01-09 22:59:59,638 | INFO     | current memory leak: 20.89 B/s (using 385 data points, chi2=0.05)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,638 | INFO     | could have reported an average CPU frequency of 2563 MHz (18 samples)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,638 | INFO     | ..............................
[2026-01-09 18:00:36] 2026-01-09 22:59:59,638 | INFO     | . Timing measurements:
[2026-01-09 18:00:36] 2026-01-09 22:59:59,638 | INFO     | . get job = 0 s
[2026-01-09 18:00:36] 2026-01-09 22:59:59,639 | INFO     | . initial setup = 2 s
[2026-01-09 18:00:36] 2026-01-09 22:59:59,639 | INFO     | . payload setup = 7 s
[2026-01-09 18:00:36] 2026-01-09 22:59:59,639 | INFO     | . stage-in = 0 s
[2026-01-09 18:00:36] 2026-01-09 22:59:59,639 | INFO     | . payload execution = 25349 s
[2026-01-09 18:00:36] 2026-01-09 22:59:59,639 | INFO     | . stage-out = 2 s
[2026-01-09 18:00:36] 2026-01-09 22:59:59,639 | INFO     | . log creation = 0 s
[2026-01-09 18:00:36] 2026-01-09 22:59:59,639 | INFO     | ..............................
[2026-01-09 18:00:36] 2026-01-09 22:59:59,715 | INFO     | 
[2026-01-09 18:00:36] 2026-01-09 22:59:59,716 | INFO     | job summary report
[2026-01-09 18:00:36] 2026-01-09 22:59:59,716 | INFO     | --------------------------------------------------
[2026-01-09 18:00:36] 2026-01-09 22:59:59,716 | INFO     | PanDA job id: 6963381685
[2026-01-09 18:00:36] 2026-01-09 22:59:59,716 | INFO     | task id: 47962010
[2026-01-09 18:00:36] 2026-01-09 22:59:59,716 | INFO     | errors: (none)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,716 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:00:36] 2026-01-09 22:59:59,717 | INFO     | pilot state: finished 
[2026-01-09 18:00:36] 2026-01-09 22:59:59,717 | INFO     | transexitcode: 0
[2026-01-09 18:00:36] 2026-01-09 22:59:59,717 | INFO     | exeerrorcode: 0
[2026-01-09 18:00:36] 2026-01-09 22:59:59,717 | INFO     | exeerrordiag: 
[2026-01-09 18:00:36] 2026-01-09 22:59:59,717 | INFO     | exitcode: 0
[2026-01-09 18:00:36] 2026-01-09 22:59:59,717 | INFO     | exitmsg: OK
[2026-01-09 18:00:36] 2026-01-09 22:59:59,717 | INFO     | cpuconsumptiontime: 292800 s
[2026-01-09 18:00:36] 2026-01-09 22:59:59,718 | INFO     | nevents: 900
[2026-01-09 18:00:36] 2026-01-09 22:59:59,718 | INFO     | neventsw: 0
[2026-01-09 18:00:36] 2026-01-09 22:59:59,718 | INFO     | pid: 22795
[2026-01-09 18:00:36] 2026-01-09 22:59:59,718 | INFO     | pgrp: 22795
[2026-01-09 18:00:36] 2026-01-09 22:59:59,718 | INFO     | corecount: 12
[2026-01-09 18:00:36] 2026-01-09 22:59:59,718 | INFO     | event service: False
[2026-01-09 18:00:36] 2026-01-09 22:59:59,719 | INFO     | sizes: {0: 2284453, 1: 2284652, 5: 2284914, 11: 2284970, 25361: 2322079, 25364: 2331073, 25367: 2331257, 25374: 2331503}
[2026-01-09 18:00:36] 2026-01-09 22:59:59,719 | INFO     | --------------------------------------------------
[2026-01-09 18:00:36] 2026-01-09 22:59:59,719 | INFO     | 
[2026-01-09 18:00:36] 2026-01-09 22:59:59,719 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 18:00:36] 2026-01-09 22:59:59,743 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,743 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,744 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,744 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,746 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,746 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:00:36] 2026-01-09 22:59:59,747 | INFO     | job 6963381685 has completed (purged errors)
[2026-01-09 18:00:36] 2026-01-09 22:59:59,747 | INFO     | overall cleanup function is called
[2026-01-09 18:00:36] 2026-01-09 23:00:00,763 | INFO     | --- collectZombieJob: --- 10, [22795]
[2026-01-09 18:00:36] 2026-01-09 23:00:00,763 | INFO     | zombie collector waiting for pid 22795
[2026-01-09 18:00:36] 2026-01-09 23:00:00,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:00:36] 2026-01-09 23:00:00,763 | INFO     | collected zombie processes
[2026-01-09 18:00:36] 2026-01-09 23:00:00,763 | INFO     | will attempt to kill all subprocesses of pid=22795
[2026-01-09 18:00:36] 2026-01-09 23:00:00,852 | INFO     | process IDs to be killed: [22795] (in reverse order)
[2026-01-09 18:00:36] 2026-01-09 23:00:00,901 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:00:36] 2026-01-09 23:00:00,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:00:36] 2026-01-09 23:00:00,906 | INFO     | did not find any defunct processes belonging to 22795
[2026-01-09 18:00:36] 2026-01-09 23:00:00,908 | INFO     | did not find any defunct processes belonging to 22795
[2026-01-09 18:00:36] 2026-01-09 23:00:00,908 | INFO     | ready for new job
[2026-01-09 18:00:36] 2026-01-09 23:00:00,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:00:36] 2026-01-09 23:00:00,910 | INFO     | ***************************************
[2026-01-09 18:00:36] 2026-01-09 23:00:00,911 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:00:36] 2026-01-09 23:00:00,911 | INFO     | ***************************************
[2026-01-09 18:00:36] 2026-01-09 23:00:00,911 | INFO     | 
[2026-01-09 18:00:36] 2026-01-09 23:00:00,911 | INFO     | architecture information:
[2026-01-09 18:00:36] 2026-01-09 23:00:00,912 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:00:36] 2026-01-09 23:00:00,929 | INFO     | cat /etc/os-release:
[2026-01-09 18:00:36] NAME="CentOS Linux"
[2026-01-09 18:00:36] VERSION="7 (Core)"
[2026-01-09 18:00:36] ID="centos"
[2026-01-09 18:00:36] ID_LIKE="rhel fedora"
[2026-01-09 18:00:36] VERSION_ID="7"
[2026-01-09 18:00:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:00:36] ANSI_COLOR="0;31"
[2026-01-09 18:00:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:00:36] HOME_URL="https://www.centos.org/"
[2026-01-09 18:00:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:00:36] 
[2026-01-09 18:00:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:00:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:00:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:00:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:00:36] 
[2026-01-09 18:00:36] 2026-01-09 23:00:00,929 | INFO     | ***************************************
[2026-01-09 18:00:36] 2026-01-09 23:00:01,430 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 18:00:36] 2026-01-09 23:00:01,447 | INFO     | sufficient remaining disk space (17623416832 B)
[2026-01-09 18:00:36] 2026-01-09 23:00:01,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:00:36] 2026-01-09 23:00:01,447 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:00:36] 2026-01-09 23:00:01,447 | INFO     | update_server=False
[2026-01-09 18:00:36] 2026-01-09 23:00:01,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:00:36] 2026-01-09 23:00:01,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:00:36] 2026-01-09 23:00:01,448 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 18:00:36] 2026-01-09 23:00:01,448 | INFO     | aborting loop
[2026-01-09 18:00:36] 2026-01-09 23:00:01,449 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:00:36] 2026-01-09 23:00:01,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:00:36] 2026-01-09 23:00:01,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:00:36] 2026-01-09 23:00:01,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:00:36] 2026-01-09 23:00:02,231 | INFO     | all data control threads have been joined
[2026-01-09 18:00:36] 2026-01-09 23:00:02,452 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:02,452 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:02,453 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:02,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:00:36] 2026-01-09 23:00:02,603 | INFO     | all payload control threads have been joined
[2026-01-09 18:00:36] 2026-01-09 23:00:02,767 | INFO     | [job] validate thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:02,857 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:02,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:00:36] 2026-01-09 23:00:02,860 | INFO     | all job control threads have been joined
[2026-01-09 18:00:36] 2026-01-09 23:00:03,001 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:03,236 | INFO     | [data] control thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:03,324 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:03,517 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:03,531 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:03,608 | INFO     | [payload] control thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:03,695 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:03,742 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:03,866 | INFO     | [job] control thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:04,472 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:06,863 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:00:36] 2026-01-09 23:00:30,852 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:00:36] 2026-01-09 23:00:31,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648482150208)>', '<ExcThread(monitor, started 139647296464640)>']
[2026-01-09 18:00:36] 2026-01-09 23:00:31,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:00:36] 2026-01-09 23:00:31,591 | INFO     | [monitor] control thread has ended
[2026-01-09 18:00:36] 2026-01-09 23:00:36,421 | INFO     | all workflow threads have been joined
[2026-01-09 18:00:36] 2026-01-09 23:00:36,421 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:00:36] 2026-01-09 23:00:36,421 | INFO     | traces error code: 0
[2026-01-09 18:00:36] 2026-01-09 23:00:36,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:00:36] 2026-01-09 23:00:36,500 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:00:36] 2026-01-09 23:00:36,503 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:00:36] 2026-01-09 23:00:36,507 [wrapper] pilotpid: 16360
[2026-01-09 18:00:36] 2026-01-09 23:00:36,511 [wrapper] Pilot exit status: 0
[2026-01-09 18:00:36] 2026-01-09 23:00:36,527 [wrapper] pandaids: 6963381685
[2026-01-09 18:00:36] 2026-01-09 23:00:36,563 [wrapper] cleanup supervisor_pilot 15257 16361
[2026-01-09 18:00:36] 2026-01-09 23:00:36,567 [wrapper] Test setup, not cleaning
[2026-01-09 18:00:36] 2026-01-09 23:00:36,571 [wrapper] apfmon messages muted
[2026-01-09 18:00:36] 2026-01-09 23:00:36,575 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:00:36] 2026-01-09 23:00:36,579 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:00:36]  *** Error codes and diagnostics ***
[2026-01-09 18:00:36]     "exeErrorCode": 0,
[2026-01-09 18:00:36]     "exeErrorDiag": "",
[2026-01-09 18:00:36]     "pilotErrorCode": 0,
[2026-01-09 18:00:36]     "pilotErrorDiag": "",
[2026-01-09 18:00:36]  *** Listing of results directory ***
[2026-01-09 18:00:36] total 1173640
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-09 18:00:36] -rwx------ 1 boincer umatlas     36322 Jan  9 02:15 runpilot2-wrapper.sh
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas       100 Jan  9 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:00:36] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 10:56 run_atlas
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas       105 Jan  9 10:56 job.xml
[2026-01-09 18:00:36] -rw-r--r-- 2 boincer umatlas 392167382 Jan  9 10:56 EVNT.47962006._000121.pool.root.1
[2026-01-09 18:00:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:56 start_atlas.sh
[2026-01-09 18:00:36] drwxrwx--x 2 boincer umatlas      4096 Jan  9 10:56 shared
[2026-01-09 18:00:36] -rw-r--r-- 2 boincer umatlas    592614 Jan  9 10:56 input.tar.gz
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas         0 Jan  9 10:56 boinc_lockfile
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas      2893 Jan  9 10:56 pandaJob.out
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas        57 Jan  9 10:56 setup.sh.local
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas    989377 Jan  9 10:56 agis_schedconf.cvmfs.json
[2026-01-09 18:00:36] drwx------ 5 boincer umatlas      4096 Jan  9 10:56 pilot3
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas       533 Jan  9 17:50 boinc_task_state.xml
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas      5956 Jan  9 17:55 init_data.xml
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas 794299922 Jan  9 17:59 HITS.47962010._001745.pool.root.1
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas      1059 Jan  9 17:59 memory_monitor_summary.json
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas   1516240 Jan  9 17:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas   2157359 Jan  9 17:59 log.47962010._001745.job.log.tgz.1
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas        95 Jan  9 17:59 pilot_heartbeat.json
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas      8659 Jan  9 17:59 heartbeat.json
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 18:00 boinc_mmap_file
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas        29 Jan  9 18:00 wrapper_checkpoint.txt
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas      4552 Jan  9 18:00 pilotlog.txt
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas   3553406 Jan  9 18:00 log.47962010._001745.job.log.1
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas       353 Jan  9 18:00 output.list
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas       620 Jan  9 18:00 runtime_log
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas   5734400 Jan  9 18:00 result.tar.gz
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas      9345 Jan  9 18:00 runtime_log.err
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas       670 Jan  9 18:00 duFKDmUtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwLhKDm0uz3rm.diag
[2026-01-09 18:00:36] -rw-r--r-- 1 boincer umatlas     21173 Jan  9 18:00 stderr.txt
[2026-01-09 18:00:36] HITS file was successfully produced:
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas 794299922 Jan  9 17:59 shared/HITS.pool.root.1
[2026-01-09 18:00:36]  *** Contents of shared directory: ***
[2026-01-09 18:00:36] total 1164860
[2026-01-09 18:00:36] -rw-r--r-- 2 boincer umatlas 392167382 Jan  9 10:56 ATLAS.root_0
[2026-01-09 18:00:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:56 start_atlas.sh
[2026-01-09 18:00:36] -rw-r--r-- 2 boincer umatlas    592614 Jan  9 10:56 input.tar.gz
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas 794299922 Jan  9 17:59 HITS.pool.root.1
[2026-01-09 18:00:36] -rw------- 1 boincer umatlas   5734400 Jan  9 18:00 result.tar.gz
18:00:37 (12669): run_atlas exited; CPU time 288059.304965
18:00:37 (12669): called boinc_finish(0)

</stderr_txt>
]]>

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