Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:55:24 (528877): wrapper (7.7.26015): starting
16:55:24 (528877): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 16:55:24] Arguments: --nthreads 3
[2026-01-09 16:55:24] Threads: 3
[2026-01-09 16:55:24] Checking for CVMFS
[2026-01-09 16:55:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:55:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:55:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:55:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:55:24] 2.9.2.0 86975 1817 75548 154948 2 57 11781780 36864001 0 130560 0 1145169 99.988 71297 4035 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 16:55:24] CVMFS is ok
[2026-01-09 16:55:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:55:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:55:24] Further information can be found at the LHC@home message board.
[2026-01-09 16:55:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:55:24] Checking for apptainer binary...
[2026-01-09 16:55:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:55:24] Running /usr/bin/apptainer --version
[2026-01-09 16:55:24] apptainer version 1.4.1-1.1
[2026-01-09 16:55:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:55:24] thA330a
[2026-01-09 16:55:24] apptainer works
[2026-01-09 16:55:24] Set ATHENA_PROC_NUMBER=3
[2026-01-09 16:55:24] Set ATHENA_CORE_NUMBER=3
[2026-01-09 16:55:24] Starting ATLAS job with PandaID=6963162679
[2026-01-09 16:55:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:43:55]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:43:55] 2026-01-09 17:43:24,848 | INFO     | 
[2026-01-09 18:43:55] 2026-01-09 17:43:24,849 | INFO     | architecture information:
[2026-01-09 18:43:55] 2026-01-09 17:43:24,849 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:43:55] 2026-01-09 17:43:24,857 | INFO     | cat /etc/os-release:
[2026-01-09 18:43:55] NAME="CentOS Linux"
[2026-01-09 18:43:55] VERSION="7 (Core)"
[2026-01-09 18:43:55] ID="centos"
[2026-01-09 18:43:55] ID_LIKE="rhel fedora"
[2026-01-09 18:43:55] VERSION_ID="7"
[2026-01-09 18:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:43:55] ANSI_COLOR="0;31"
[2026-01-09 18:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:43:55] HOME_URL="https://www.centos.org/"
[2026-01-09 18:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:43:55] 
[2026-01-09 18:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:43:55] 
[2026-01-09 18:43:55] 2026-01-09 17:43:24,857 | INFO     | ***************************************
[2026-01-09 18:43:55] 2026-01-09 17:43:25,360 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 18:43:55] 2026-01-09 17:43:25,373 | INFO     | sufficient remaining disk space (249481396224 B)
[2026-01-09 18:43:55] 2026-01-09 17:43:25,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:43:55] 2026-01-09 17:43:25,374 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:43:55] 2026-01-09 17:43:25,374 | INFO     | update_server=False
[2026-01-09 18:43:55] 2026-01-09 17:43:25,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:43:55] 2026-01-09 17:43:25,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:43:55] 2026-01-09 17:43:25,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:43:55] 2026-01-09 17:43:25,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:43:55] 2026-01-09 17:43:25,374 | INFO     | aborting loop
[2026-01-09 18:43:55] 2026-01-09 17:43:25,809 | INFO     | all payload control threads have been joined
[2026-01-09 18:43:55] 2026-01-09 17:43:26,005 | INFO     | all data control threads have been joined
[2026-01-09 18:43:55] 2026-01-09 17:43:26,379 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:26,379 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:26,380 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:26,410 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:26,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:43:55] 2026-01-09 17:43:26,815 | INFO     | [payload] control thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:26,837 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:27,011 | INFO     | [data] control thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:27,077 | INFO     | all job control threads have been joined
[2026-01-09 18:43:55] 2026-01-09 17:43:27,211 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:27,472 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:27,769 | INFO     | [job] validate thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:27,799 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:27,822 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:28,082 | INFO     | [job] control thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:28,774 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:29,380 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:36,084 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:43:55] 2026-01-09 17:43:37,090 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:43:55] 2026-01-09 17:43:38,182 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:43:55] 2026-01-09 17:43:38,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916616087360)>', '<ExcThread(monitor, started 139916126181120)>']
[2026-01-09 18:43:55] 2026-01-09 17:43:43,997 | INFO     | all workflow threads have been joined
[2026-01-09 18:43:55] 2026-01-09 17:43:43,997 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:43:55] 2026-01-09 17:43:43,998 | INFO     | traces error code: 0
[2026-01-09 18:43:55] 2026-01-09 17:43:43,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:43:55] 2026-01-09 17:43:55,129 | INFO     | PID=532595 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 18:43:55] 2026-01-09 17:43:55,129 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:43:55] 2026-01-09 17:43:55,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:43:55] 2026-01-09 17:43:55,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:43:55] 2026-01-09 17:43:55,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:43:55] 2026-01-09 17:43:55,129 | INFO     | [monitor] control thread has ended
[2026-01-09 18:43:55] 2026-01-09 17:43:55,176 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:43:55] 2026-01-09 17:43:55,178 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:43:55] 2026-01-09 17:43:55,180 [wrapper] pilotpid: 532595
[2026-01-09 18:43:55] 2026-01-09 17:43:55,183 [wrapper] Pilot exit status: 0
[2026-01-09 18:43:55] 2026-01-09 17:43:55,190 [wrapper] pandaids: 6963162679
[2026-01-09 18:43:55] 2026-01-09 17:43:55,206 [wrapper] cleanup supervisor_pilot  553755 532596
[2026-01-09 18:43:55] 2026-01-09 17:43:55,209 [wrapper] Test setup, not cleaning
[2026-01-09 18:43:55] 2026-01-09 17:43:55,211 [wrapper] apfmon messages muted
[2026-01-09 18:43:55] 2026-01-09 17:43:55,213 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:43:55] 2026-01-09 17:43:55,215 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:43:55]  *** Error codes and diagnostics ***
[2026-01-09 18:43:55]     "exeErrorCode": 0,
[2026-01-09 18:43:55]     "exeErrorDiag": "",
[2026-01-09 18:43:55]     "pilotErrorCode": 0,
[2026-01-09 18:43:55]     "pilotErrorDiag": "",
[2026-01-09 18:43:55]  *** Listing of results directory ***
[2026-01-09 18:43:55] total 441940
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 18:43:55] -rwx------ 1 boinc boinc     36322 Jan  9 01:58 runpilot2-wrapper.sh
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:01 queuedata.json
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc       100 Jan  9 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:43:55] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 16:55 run_atlas
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc       105 Jan  9 16:55 job.xml
[2026-01-09 18:43:55] -rw-r--r-- 2 boinc boinc 222798720 Jan  9 16:55 EVNT.47898824._001305.pool.root.1
[2026-01-09 18:43:55] -rw-r--r-- 2 boinc boinc    592396 Jan  9 16:55 input.tar.gz
[2026-01-09 18:43:55] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:55 start_atlas.sh
[2026-01-09 18:43:55] drwxrwx--x 2 boinc boinc      4096 Jan  9 16:55 shared
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:55 boinc_setup_complete
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc      6440 Jan  9 16:55 init_data.xml
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:55 boinc_lockfile
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc      2520 Jan  9 16:55 pandaJob.out
[2026-01-09 18:43:55] -rw------- 1 boinc boinc    989377 Jan  9 16:55 agis_schedconf.cvmfs.json
[2026-01-09 18:43:55] -rw------- 1 boinc boinc   1516240 Jan  9 16:55 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:43:55] drwx------ 5 boinc boinc      4096 Jan  9 16:55 pilot3
[2026-01-09 18:43:55] -rw------- 1 boinc boinc 223425997 Jan  9 18:42 HITS.47898826._034235.pool.root.1
[2026-01-09 18:43:55] -rw------- 1 boinc boinc        95 Jan  9 18:43 pilot_heartbeat.json
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc       529 Jan  9 18:43 boinc_task_state.xml
[2026-01-09 18:43:55] -rw------- 1 boinc boinc      1015 Jan  9 18:43 memory_monitor_summary.json
[2026-01-09 18:43:55] -rw------- 1 boinc boinc    274661 Jan  9 18:43 log.47898826._034235.job.log.tgz.1
[2026-01-09 18:43:55] -rw------- 1 boinc boinc      7755 Jan  9 18:43 heartbeat.json
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc      8192 Jan  9 18:43 boinc_mmap_file
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc        27 Jan  9 18:43 wrapper_checkpoint.txt
[2026-01-09 18:43:55] -rw------- 1 boinc boinc       746 Jan  9 18:43 pilotlog.txt
[2026-01-09 18:43:55] -rw------- 1 boinc boinc    934763 Jan  9 18:43 log.47898826._034235.job.log.1
[2026-01-09 18:43:55] -rw------- 1 boinc boinc       357 Jan  9 18:43 output.list
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc       620 Jan  9 18:43 runtime_log
[2026-01-09 18:43:55] -rw------- 1 boinc boinc   1228800 Jan  9 18:43 result.tar.gz
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc      8902 Jan  9 18:43 runtime_log.err
[2026-01-09 18:43:55] -rw------- 1 boinc boinc       660 Jan  9 18:43 cMjLDmy0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmswlKDmdgx4mn.diag
[2026-01-09 18:43:55] -rw-r--r-- 1 boinc boinc      9118 Jan  9 18:43 stderr.txt
[2026-01-09 18:43:55] HITS file was successfully produced:
[2026-01-09 18:43:55] -rw------- 1 boinc boinc 223425997 Jan  9 18:42 shared/HITS.pool.root.1
[2026-01-09 18:43:55]  *** Contents of shared directory: ***
[2026-01-09 18:43:55] total 437576
[2026-01-09 18:43:55] -rw-r--r-- 2 boinc boinc 222798720 Jan  9 16:55 ATLAS.root_0
[2026-01-09 18:43:55] -rw-r--r-- 2 boinc boinc    592396 Jan  9 16:55 input.tar.gz
[2026-01-09 18:43:55] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:55 start_atlas.sh
[2026-01-09 18:43:55] -rw------- 1 boinc boinc 223425997 Jan  9 18:42 HITS.pool.root.1
[2026-01-09 18:43:55] -rw------- 1 boinc boinc   1228800 Jan  9 18:43 result.tar.gz
18:44:17 (528877): run_atlas exited; CPU time 18813.752124
18:44:17 (528877): called boinc_finish(0)

</stderr_txt>
]]>

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