Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:15:04 (1139922): wrapper (7.7.26015): starting
11:15:04 (1139922): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 11:15:04] Arguments: --nthreads 9
[2026-01-09 11:15:04] Threads: 9
[2026-01-09 11:15:04] Checking for CVMFS
[2026-01-09 11:15:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:15:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:15:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:15:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:15:05] 2.13.3.0 7268 23110 213404 154948 1 414 40410271 40960001 22707 16776704 0 55821559 99.658 52915398 39181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:15:05] CVMFS is ok
[2026-01-09 11:15:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:15:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:15:05] Further information can be found at the LHC@home message board.
[2026-01-09 11:15:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:15:05] Checking for apptainer binary...
[2026-01-09 11:15:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:15:05] Running /usr/bin/apptainer --version
[2026-01-09 11:15:05] apptainer version 1.4.5-2.el9
[2026-01-09 11:15:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:15:06] c-212-18.aglt2.org
[2026-01-09 11:15:06] apptainer works
[2026-01-09 11:15:06] Set ATHENA_PROC_NUMBER=9
[2026-01-09 11:15:06] Set ATHENA_CORE_NUMBER=9
[2026-01-09 11:15:06] Starting ATLAS job with PandaID=6963381649
[2026-01-09 11:15:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:46:48 (204991): wrapper (7.7.26015): starting
23:46:48 (204991): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 23:46:48] Arguments: --nthreads 8
[2026-01-09 23:46:48] Threads: 8
[2026-01-09 23:46:48] This job has been restarted, cleaning up previous attempt
[2026-01-09 23:46:48] Checking for CVMFS
[2026-01-09 23:46:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 23:46:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 23:46:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 23:46:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 23:46:48] 2.13.3.0 7268 23861 214664 154968 3 386 33159053 40960000 21706 16776704 0 57987129 99.659 54069840 38992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 23:46:48] CVMFS is ok
[2026-01-09 23:46:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 23:46:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 23:46:48] Further information can be found at the LHC@home message board.
[2026-01-09 23:46:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 23:46:48] Checking for apptainer binary...
[2026-01-09 23:46:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 23:46:48] Running /usr/bin/apptainer --version
[2026-01-09 23:46:48] apptainer version 1.4.5-2.el9
[2026-01-09 23:46:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 23:46:49] c-212-18.aglt2.org
[2026-01-09 23:46:49] apptainer works
[2026-01-09 23:46:49] Set ATHENA_PROC_NUMBER=8
[2026-01-09 23:46:49] Set ATHENA_CORE_NUMBER=8
[2026-01-09 23:46:49] Starting ATLAS job with PandaID=6963381649
[2026-01-09 23:46:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:10:38]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:10:38] 2026-01-10 20:09:54,173 | INFO     | time since job start (55375s) is within the limit (349056.0s)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,179 | INFO     | time since job start (55377s) is within the limit (349056.0s)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,564 | INFO     | monitor loop #3858: job 0:6963381649 is in state 'finished'
[2026-01-10 15:10:38] 2026-01-10 20:09:56,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,605 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 15:10:38] 2026-01-10 20:09:56,618 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3330.81346875
[2026-01-10 15:10:38] 2026-01-10 20:09:56,631 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963381649/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,632 | INFO     | extracted standard info from prmon json
[2026-01-10 15:10:38] 2026-01-10 20:09:56,632 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:10:38] 2026-01-10 20:09:56,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:10:38] 2026-01-10 20:09:56,644 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:10:38] 2026-01-10 20:09:56,645 | INFO     | sum of square deviations: 232133746197.08807
[2026-01-10 15:10:38] 2026-01-10 20:09:56,655 | INFO     | sum of deviations: 2356048937978.969
[2026-01-10 15:10:38] 2026-01-10 20:09:56,655 | INFO     | mean x: 1768048111.3854625
[2026-01-10 15:10:38] 2026-01-10 20:09:56,655 | INFO     | mean y: 3099969.7400881057
[2026-01-10 15:10:38] 2026-01-10 20:09:56,655 | INFO     | intersect: -17941761315.480904
[2026-01-10 15:10:38] 2026-01-10 20:09:56,656 | INFO     | chi2: 6.340111979291635
[2026-01-10 15:10:38] 2026-01-10 20:09:56,657 | INFO     | sum of square deviations: 228320282698.1463
[2026-01-10 15:10:38] 2026-01-10 20:09:56,670 | INFO     | sum of deviations: 2627350599952.091
[2026-01-10 15:10:38] 2026-01-10 20:09:56,671 | INFO     | mean x: 1768047958.8903654
[2026-01-10 15:10:38] 2026-01-10 20:09:56,671 | INFO     | mean y: 3110806.2635658914
[2026-01-10 15:10:38] 2026-01-10 20:09:56,671 | INFO     | intersect: -20342352201.401085
[2026-01-10 15:10:38] 2026-01-10 20:09:56,672 | INFO     | chi2: 3.7931460631336082
[2026-01-10 15:10:38] 2026-01-10 20:09:56,672 | INFO     | current chi2=3.7931460631336082 (change=40.17225444088438 %)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,672 | INFO     | sum of square deviations: 224548709944.2372
[2026-01-10 15:10:38] 2026-01-10 20:09:56,681 | INFO     | sum of deviations: 2615388136172.5933
[2026-01-10 15:10:38] 2026-01-10 20:09:56,681 | INFO     | mean x: 1768047806.3930957
[2026-01-10 15:10:38] 2026-01-10 20:09:56,681 | INFO     | mean y: 3110318.740534521
[2026-01-10 15:10:38] 2026-01-10 20:09:56,681 | INFO     | intersect: -20589888225.65014
[2026-01-10 15:10:38] 2026-01-10 20:09:56,682 | INFO     | chi2: 3.7420241131163454
[2026-01-10 15:10:38] 2026-01-10 20:09:56,682 | INFO     | current chi2=3.7420241131163454 (change=1.3477453587703334 %)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,682 | INFO     | right removable region: 897
[2026-01-10 15:10:38] 2026-01-10 20:09:56,683 | INFO     | sum of square deviations: 228319792258.14624
[2026-01-10 15:10:38] 2026-01-10 20:09:56,693 | INFO     | sum of deviations: 2053518381760.9358
[2026-01-10 15:10:38] 2026-01-10 20:09:56,694 | INFO     | mean x: 1768048263.8903654
[2026-01-10 15:10:38] 2026-01-10 20:09:56,694 | INFO     | mean y: 3112053.130675526
[2026-01-10 15:10:38] 2026-01-10 20:09:56,694 | INFO     | intersect: -15898792787.577826
[2026-01-10 15:10:38] 2026-01-10 20:09:56,694 | INFO     | chi2: 3.636149636552246
[2026-01-10 15:10:38] 2026-01-10 20:09:56,695 | INFO     | current chi2=3.636149636552246 (change=42.6484950355955 %)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,695 | INFO     | sum of square deviations: 224547839106.66043
[2026-01-10 15:10:38] 2026-01-10 20:09:56,709 | INFO     | sum of deviations: 1957542114874.34
[2026-01-10 15:10:38] 2026-01-10 20:09:56,709 | INFO     | mean x: 1768048416.395323
[2026-01-10 15:10:38] 2026-01-10 20:09:56,709 | INFO     | mean y: 3115932.6525612473
[2026-01-10 15:10:38] 2026-01-10 20:09:56,710 | INFO     | intersect: -15410210911.19534
[2026-01-10 15:10:38] 2026-01-10 20:09:56,710 | INFO     | chi2: 3.517905772560239
[2026-01-10 15:10:38] 2026-01-10 20:09:56,710 | INFO     | current chi2=3.517905772560239 (change=3.2518976337872707 %)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,710 | INFO     | left removable region: 20
[2026-01-10 15:10:38] 2026-01-10 20:09:56,711 | INFO     | sum of square deviations: 209160385571.9544
[2026-01-10 15:10:38] 2026-01-10 20:09:56,724 | INFO     | sum of deviations: 2073063181423.481
[2026-01-10 15:10:38] 2026-01-10 20:09:56,724 | INFO     | mean x: 1768048385.904219
[2026-01-10 15:10:38] 2026-01-10 20:09:56,724 | INFO     | mean y: 3132135.112884835
[2026-01-10 15:10:38] 2026-01-10 20:09:56,724 | INFO     | intersect: -17520626017.13215
[2026-01-10 15:10:38] 2026-01-10 20:09:56,725 | INFO     | chi2: 0.8316220576414585
[2026-01-10 15:10:38] 2026-01-10 20:09:56,725 | INFO     | current memory leak: 9.91 B/s (using 877 data points, chi2=0.83)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,726 | INFO     | could have reported an average CPU frequency of 3322 MHz (34 samples)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,726 | INFO     | ..............................
[2026-01-10 15:10:38] 2026-01-10 20:09:56,726 | INFO     | . Timing measurements:
[2026-01-10 15:10:38] 2026-01-10 20:09:56,726 | INFO     | . get job = 0 s
[2026-01-10 15:10:38] 2026-01-10 20:09:56,726 | INFO     | . initial setup = 2 s
[2026-01-10 15:10:38] 2026-01-10 20:09:56,726 | INFO     | . payload setup = 6 s
[2026-01-10 15:10:38] 2026-01-10 20:09:56,727 | INFO     | . stage-in = 0 s
[2026-01-10 15:10:38] 2026-01-10 20:09:56,727 | INFO     | . payload execution = 55339 s
[2026-01-10 15:10:38] 2026-01-10 20:09:56,727 | INFO     | . stage-out = 2 s
[2026-01-10 15:10:38] 2026-01-10 20:09:56,727 | INFO     | . log creation = 0 s
[2026-01-10 15:10:38] 2026-01-10 20:09:56,727 | INFO     | ..............................
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | 
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | job summary report
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | --------------------------------------------------
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | PanDA job id: 6963381649
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | task id: 47962010
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | errors: (none)
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | pilot state: finished 
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | transexitcode: 0
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | exeerrorcode: 0
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | exeerrordiag: 
[2026-01-10 15:10:38] 2026-01-10 20:09:56,970 | INFO     | exitcode: 0
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | exitmsg: OK
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | cpuconsumptiontime: 191903 s
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | nevents: 900
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | neventsw: 0
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | pid: 261716
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | pgrp: 261716
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | corecount: 8
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | event service: False
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | sizes: {0: 2284397, 1: 2284652, 5: 2284914, 11: 2284970, 55349: 2334930, 55350: 2334929, 55353: 2344107, 55355: 2344163, 55362: 2344409}
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | --------------------------------------------------
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | 
[2026-01-10 15:10:38] 2026-01-10 20:09:56,971 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,005 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:10:38] 2026-01-10 20:09:57,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:10:38] 2026-01-10 20:09:57,005 | INFO     | job 6963381649 has completed (purged errors)
[2026-01-10 15:10:38] 2026-01-10 20:09:57,005 | INFO     | overall cleanup function is called
[2026-01-10 15:10:38] 2026-01-10 20:09:58,020 | INFO     | --- collectZombieJob: --- 10, [261716]
[2026-01-10 15:10:38] 2026-01-10 20:09:58,020 | INFO     | zombie collector waiting for pid 261716
[2026-01-10 15:10:38] 2026-01-10 20:09:58,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:10:38] 2026-01-10 20:09:58,020 | INFO     | collected zombie processes
[2026-01-10 15:10:38] 2026-01-10 20:09:58,020 | INFO     | will attempt to kill all subprocesses of pid=261716
[2026-01-10 15:10:38] 2026-01-10 20:09:58,489 | INFO     | process IDs to be killed: [261716] (in reverse order)
[2026-01-10 15:10:38] 2026-01-10 20:09:58,663 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:10:38] 2026-01-10 20:09:58,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:10:38] 2026-01-10 20:09:58,681 | INFO     | did not find any defunct processes belonging to 261716
[2026-01-10 15:10:38] 2026-01-10 20:09:58,697 | INFO     | did not find any defunct processes belonging to 261716
[2026-01-10 15:10:38] 2026-01-10 20:09:58,698 | INFO     | ready for new job
[2026-01-10 15:10:38] 2026-01-10 20:09:58,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:10:38] 2026-01-10 20:09:58,701 | INFO     | ***************************************
[2026-01-10 15:10:38] 2026-01-10 20:09:58,701 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:10:38] 2026-01-10 20:09:58,701 | INFO     | ***************************************
[2026-01-10 15:10:38] 2026-01-10 20:09:58,701 | INFO     | 
[2026-01-10 15:10:38] 2026-01-10 20:09:58,706 | INFO     | architecture information:
[2026-01-10 15:10:38] 2026-01-10 20:09:58,706 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:10:38] 2026-01-10 20:09:58,732 | INFO     | cat /etc/os-release:
[2026-01-10 15:10:38] NAME="CentOS Linux"
[2026-01-10 15:10:38] VERSION="7 (Core)"
[2026-01-10 15:10:38] ID="centos"
[2026-01-10 15:10:38] ID_LIKE="rhel fedora"
[2026-01-10 15:10:38] VERSION_ID="7"
[2026-01-10 15:10:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:10:38] ANSI_COLOR="0;31"
[2026-01-10 15:10:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:10:38] HOME_URL="https://www.centos.org/"
[2026-01-10 15:10:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:10:38] 
[2026-01-10 15:10:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:10:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:10:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:10:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:10:38] 
[2026-01-10 15:10:38] 2026-01-10 20:09:58,732 | INFO     | ***************************************
[2026-01-10 15:10:38] 2026-01-10 20:09:59,238 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 15:10:38] 2026-01-10 20:09:59,272 | INFO     | sufficient remaining disk space (127505793024 B)
[2026-01-10 15:10:38] 2026-01-10 20:09:59,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:10:38] 2026-01-10 20:09:59,272 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:10:38] 2026-01-10 20:09:59,272 | INFO     | update_server=False
[2026-01-10 15:10:38] 2026-01-10 20:09:59,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:10:38] 2026-01-10 20:10:00,047 | INFO     | all data control threads have been joined
[2026-01-10 15:10:38] 2026-01-10 20:10:00,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:10:38] 2026-01-10 20:10:00,072 | INFO     | aborting loop
[2026-01-10 15:10:38] 2026-01-10 20:10:00,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:10:38] 2026-01-10 20:10:00,279 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:00,400 | INFO     | all payload control threads have been joined
[2026-01-10 15:10:38] 2026-01-10 20:10:00,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:10:38] 2026-01-10 20:10:00,574 | INFO     | all job control threads have been joined
[2026-01-10 15:10:38] 2026-01-10 20:10:00,589 | INFO     | [job] validate thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:00,936 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,053 | INFO     | [data] control thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,058 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,077 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,110 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,382 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,406 | INFO     | [payload] control thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,466 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,580 | INFO     | [job] control thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,723 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,768 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:01,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:10:38] 2026-01-10 20:10:02,451 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:02,818 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:04,234 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:10:38] 2026-01-10 20:10:29,777 | INFO     | PID=224016 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 15:10:38] 2026-01-10 20:10:29,777 | INFO     | .. there are 27 such processes running
[2026-01-10 15:10:38] 2026-01-10 20:10:29,778 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:10:38] 2026-01-10 20:10:29,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:10:38] 2026-01-10 20:10:29,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:10:38] 2026-01-10 20:10:32,342 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:10:38] 2026-01-10 20:10:33,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043410945856)>', '<ExcThread(monitor, started 140043045828352)>']
[2026-01-10 15:10:38] 2026-01-10 20:10:33,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:10:38] 2026-01-10 20:10:33,801 | INFO     | [monitor] control thread has ended
[2026-01-10 15:10:38] 2026-01-10 20:10:38,501 | INFO     | all workflow threads have been joined
[2026-01-10 15:10:38] 2026-01-10 20:10:38,501 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:10:38] 2026-01-10 20:10:38,501 | INFO     | traces error code: 0
[2026-01-10 15:10:38] 2026-01-10 20:10:38,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:10:38] 2026-01-10 20:10:38,638 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:10:38] 2026-01-10 20:10:38,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:10:38] 2026-01-10 20:10:38,643 [wrapper] pilotpid: 224016
[2026-01-10 15:10:38] 2026-01-10 20:10:38,646 [wrapper] Pilot exit status: 0
[2026-01-10 15:10:38] 2026-01-10 20:10:38,660 [wrapper] pandaids: 6963381649 6963381649
[2026-01-10 15:10:38] 2026-01-10 20:10:38,776 [wrapper] cleanup supervisor_pilot 1376399 224017
[2026-01-10 15:10:38] 2026-01-10 20:10:38,780 [wrapper] Test setup, not cleaning
[2026-01-10 15:10:38] 2026-01-10 20:10:38,785 [wrapper] apfmon messages muted
[2026-01-10 15:10:38] 2026-01-10 20:10:38,789 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:10:38] 2026-01-10 20:10:38,793 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:10:38]  *** Error codes and diagnostics ***
[2026-01-10 15:10:38]     "exeErrorCode": 0,
[2026-01-10 15:10:38]     "exeErrorDiag": "",
[2026-01-10 15:10:38]     "pilotErrorCode": 0,
[2026-01-10 15:10:38]     "pilotErrorDiag": "",
[2026-01-10 15:10:38]  *** Listing of results directory ***
[2026-01-10 15:10:38] total 1560000
[2026-01-10 15:10:38] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 15:10:38] -rwx------. 1 boincer umatlas     36322 Jan  9 02:15 runpilot2-wrapper.sh
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas       100 Jan  9 11:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:10:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 11:15 run_atlas
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas       105 Jan  9 11:15 job.xml
[2026-01-10 15:10:38] -rw-r--r--. 3 boincer umatlas 392678259 Jan  9 11:15 EVNT.47962006._000117.pool.root.1
[2026-01-10 15:10:38] -rw-r--r--. 3 boincer umatlas 392678259 Jan  9 11:15 ATLAS.root_0
[2026-01-10 15:10:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:15 start_atlas.sh
[2026-01-10 15:10:38] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 11:15 shared
[2026-01-10 15:10:38] -rw-r--r--. 2 boincer umatlas    592620 Jan  9 11:15 input.tar.gz
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas         0 Jan  9 11:15 boinc_lockfile
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas      2893 Jan  9 23:46 pandaJob.out
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas        57 Jan  9 23:46 setup.sh.local
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas    989374 Jan  9 23:46 agis_schedconf.cvmfs.json
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas      6958 Jan 10 15:00 init_data.xml
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas       533 Jan 10 15:03 boinc_task_state.xml
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas 788868485 Jan 10 15:09 HITS.47962010._001709.pool.root.1
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas      1072 Jan 10 15:09 memory_monitor_summary.json
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas   1516240 Jan 10 15:09 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas   2093655 Jan 10 15:09 log.47962010._001709.job.log.tgz.1
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas      8630 Jan 10 15:09 heartbeat.json
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas        96 Jan 10 15:10 pilot_heartbeat.json
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 15:10 boinc_mmap_file
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas        29 Jan 10 15:10 wrapper_checkpoint.txt
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas      4824 Jan 10 15:10 pilotlog.txt
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas   7556050 Jan 10 15:10 log.47962010._001709.job.log.1
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas       353 Jan 10 15:10 output.list
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas       620 Jan 10 15:10 runtime_log
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas   9666560 Jan 10 15:10 result.tar.gz
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas      9428 Jan 10 15:10 runtime_log.err
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas       790 Jan 10 15:10 hvaNDmTtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjLhKDm15lOsn.diag
[2026-01-10 15:10:38] -rw-r--r--. 1 boincer umatlas     23399 Jan 10 15:10 stderr.txt
[2026-01-10 15:10:38] HITS file was successfully produced:
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas 788868485 Jan 10 15:09 shared/HITS.pool.root.1
[2026-01-10 15:10:38]  *** Contents of shared directory: ***
[2026-01-10 15:10:38] total 1163896
[2026-01-10 15:10:38] -rw-r--r--. 3 boincer umatlas 392678259 Jan  9 11:15 ATLAS.root_0
[2026-01-10 15:10:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:15 start_atlas.sh
[2026-01-10 15:10:38] -rw-r--r--. 2 boincer umatlas    592620 Jan  9 11:15 input.tar.gz
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas 788868485 Jan 10 15:09 HITS.pool.root.1
[2026-01-10 15:10:38] -rw-------. 1 boincer umatlas   9666560 Jan 10 15:10 result.tar.gz
15:10:40 (204991): run_atlas exited; CPU time 192409.507552
15:10:40 (204991): called boinc_finish(0)

</stderr_txt>
]]>

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