Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:10:04 (766714): wrapper (7.7.26015): starting
08:10:04 (766714): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 08:10:04] Arguments: --nthreads 12
[2026-01-09 08:10:04] Threads: 12
[2026-01-09 08:10:04] Checking for CVMFS
[2026-01-09 08:10:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:10:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:10:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:10:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:10:04] 2.11.5.0 1829866 91658 167260 154948 1 443 45043665 45568001 12593 130560 0 699859658 99.776 464512688 23754 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-09 08:10:04] CVMFS is ok
[2026-01-09 08:10:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:10:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:10:04] Further information can be found at the LHC@home message board.
[2026-01-09 08:10:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:10:04] Checking for apptainer binary...
[2026-01-09 08:10:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:10:04] Running /usr/bin/apptainer --version
[2026-01-09 08:10:04] apptainer version 1.4.1-1.el9
[2026-01-09 08:10:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:10:04] wns0093.triumf.lcg
[2026-01-09 08:10:04] apptainer works
[2026-01-09 08:10:04] Set ATHENA_PROC_NUMBER=12
[2026-01-09 08:10:04] Set ATHENA_CORE_NUMBER=12
[2026-01-09 08:10:04] Starting ATLAS job with PandaID=6963379703
[2026-01-09 08:10:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:14:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:14:19] 2026-01-09 16:13:27,312 | WARNING  | wrong length of table data, x=[1767975036.0], y=[1658.0] (must be same and length>=4)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | ..............................
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . Timing measurements:
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . get job = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . initial setup = 2 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . payload setup = 4 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . stage-in = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . payload execution = 50 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . stage-out = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | . log creation = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | ..............................
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963379703/pilotlog.txt
[2026-01-09 08:14:19] 2026-01-09 16:13:27,323 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 08:14:19] - Log from pilotlog.txt -
[2026-01-09 08:14:19] 2026-01-09 16:13:27,310 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963379703/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,311 | INFO     | extracted standard info from prmon json
[2026-01-09 08:14:19] 2026-01-09 16:13:27,311 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:14:19] 2026-01-09 16:13:27,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:14:19] 2026-01-09 16:13:27,311 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:14:19] 2026-01-09 16:13:27,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:14:19] 2026-01-09 16:13:27,312 | WARNING  | wrong length of table data, x=[1767975036.0], y=[1658.0] (must be same and length>=4)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | ..............................
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . Timing measurements:
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . get job = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . initial setup = 2 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . payload setup = 4 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . stage-in = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . payload execution = 50 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . stage-out = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | . log creation = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | ..............................
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963379703/pilotlog.txt
[2026-01-09 08:14:19] 2026-01-09 16:13:27,324 | WARNING  | 
[2026-01-09 08:14:19] [begin log extracts]
[2026-01-09 08:14:19] - Log from pilotlog.txt -
[2026-01-09 08:14:19] 2026-01-09 16:13:27,310 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963379703/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,311 | INFO     | extracted standard info from prmon json
[2026-01-09 08:14:19] 2026-01-09 16:13:27,311 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:14:19] 2026-01-09 16:13:27,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:14:19] 2026-01-09 16:13:27,311 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:14:19] 2026-01-09 16:13:27,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:14:19] 2026-01-09 16:13:27,312 | WARNING  | wrong length of table data, x=[1767975036.0], y=[1658.0] (must be same and length>=4)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | ..............................
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . Timing measurements:
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . get job = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . initial setup = 2 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . payload setup = 4 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . stage-in = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . payload execution = 50 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,313 | INFO     | . stage-out = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | . log creation = 0 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | ..............................
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:14:19] 2026-01-09 16:13:27,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963379703/pilotlog.txt
[2026-01-09 08:14:19] [end log extracts]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,324 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,324 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 08:14:19] 2026-01-09 16:13:27,379 | INFO     | 
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | job summary report
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | --------------------------------------------------
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | PanDA job id: 6963379703
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | task id: 47962010
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 08:11:18,387 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | pilot state: failed 
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | transexitcode: 65
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | exeerrorcode: 65
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | exitcode: 65
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | cpuconsumptiontime: 41 s
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | nevents: 0
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | neventsw: 0
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | pid: 777141
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | pgrp: 777141
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | corecount: 12
[2026-01-09 08:14:19] 2026-01-09 16:13:27,380 | INFO     | event service: False
[2026-01-09 08:14:19] 2026-01-09 16:13:27,381 | INFO     | sizes: {0: 2284448, 1: 2284647, 4: 2284909, 11: 2284937, 57: 2310452, 59: 2314898, 179: 2315036}
[2026-01-09 08:14:19] 2026-01-09 16:13:27,381 | INFO     | --------------------------------------------------
[2026-01-09 08:14:19] 2026-01-09 16:13:27,381 | INFO     | 
[2026-01-09 08:14:19] 2026-01-09 16:13:27,381 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | job 6963379703 has completed (purged errors)
[2026-01-09 08:14:19] 2026-01-09 16:13:27,395 | INFO     | overall cleanup function is called
[2026-01-09 08:14:19] 2026-01-09 16:13:28,403 | INFO     | --- collectZombieJob: --- 10, [777141]
[2026-01-09 08:14:19] 2026-01-09 16:13:28,403 | INFO     | zombie collector waiting for pid 777141
[2026-01-09 08:14:19] 2026-01-09 16:13:28,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:14:19] 2026-01-09 16:13:28,404 | INFO     | collected zombie processes
[2026-01-09 08:14:19] 2026-01-09 16:13:28,404 | INFO     | will attempt to kill all subprocesses of pid=777141
[2026-01-09 08:14:19] 2026-01-09 16:13:28,570 | INFO     | process IDs to be killed: [777141] (in reverse order)
[2026-01-09 08:14:19] 2026-01-09 16:13:28,635 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:14:19] 2026-01-09 16:13:28,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:14:19] 2026-01-09 16:13:28,642 | INFO     | did not find any defunct processes belonging to 777141
[2026-01-09 08:14:19] 2026-01-09 16:13:28,648 | INFO     | did not find any defunct processes belonging to 777141
[2026-01-09 08:14:19] 2026-01-09 16:13:28,649 | INFO     | ready for new job
[2026-01-09 08:14:19] 2026-01-09 16:13:28,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:14:19] 2026-01-09 16:13:28,651 | INFO     | ***************************************
[2026-01-09 08:14:19] 2026-01-09 16:13:28,651 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:14:19] 2026-01-09 16:13:28,651 | INFO     | ***************************************
[2026-01-09 08:14:19] 2026-01-09 16:13:28,651 | INFO     | 
[2026-01-09 08:14:19] 2026-01-09 16:13:28,653 | INFO     | architecture information:
[2026-01-09 08:14:19] 2026-01-09 16:13:28,654 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:14:19] 2026-01-09 16:13:28,664 | INFO     | cat /etc/os-release:
[2026-01-09 08:14:19] NAME="CentOS Linux"
[2026-01-09 08:14:19] VERSION="7 (Core)"
[2026-01-09 08:14:19] ID="centos"
[2026-01-09 08:14:19] ID_LIKE="rhel fedora"
[2026-01-09 08:14:19] VERSION_ID="7"
[2026-01-09 08:14:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:14:19] ANSI_COLOR="0;31"
[2026-01-09 08:14:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:14:19] HOME_URL="https://www.centos.org/"
[2026-01-09 08:14:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:14:19] 
[2026-01-09 08:14:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:14:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:14:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:14:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:14:19] 
[2026-01-09 08:14:19] 2026-01-09 16:13:28,665 | INFO     | ***************************************
[2026-01-09 08:14:19] 2026-01-09 16:13:29,168 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 08:14:19] 2026-01-09 16:13:29,180 | INFO     | sufficient remaining disk space (2001839587328 B)
[2026-01-09 08:14:19] 2026-01-09 16:13:29,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:14:19] 2026-01-09 16:13:29,181 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:14:19] 2026-01-09 16:13:29,181 | INFO     | update_server=False
[2026-01-09 08:14:19] 2026-01-09 16:13:29,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:14:19] 2026-01-09 16:13:29,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:14:19] 2026-01-09 16:13:29,295 | INFO     | all job control threads have been joined
[2026-01-09 08:14:19] 2026-01-09 16:13:29,359 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 08:14:19] 2026-01-09 16:13:29,359 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 08:14:19] 2026-01-09 16:13:29,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:14:19] 2026-01-09 16:13:29,360 | INFO     | will abort loop
[2026-01-09 08:14:19] 2026-01-09 16:13:29,589 | INFO     | all data control threads have been joined
[2026-01-09 08:14:19] 2026-01-09 16:13:30,186 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:30,187 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:30,260 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:30,263 | INFO     | all payload control threads have been joined
[2026-01-09 08:14:19] 2026-01-09 16:13:30,301 | INFO     | [job] control thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:30,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:14:19] 2026-01-09 16:13:30,365 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:30,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:14:19] 2026-01-09 16:13:30,578 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:30,594 | INFO     | [data] control thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:31,088 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:31,205 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:31,268 | INFO     | [payload] control thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:31,364 | INFO     | [job] validate thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:31,477 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:31,595 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:31,611 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:32,351 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:34,535 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:14:19] 2026-01-09 16:13:59,472 | INFO     | PID=770411 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 08:14:19] 2026-01-09 16:13:59,472 | INFO     | .. there are 28 such processes running
[2026-01-09 08:14:19] 2026-01-09 16:13:59,473 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:14:19] 2026-01-09 16:13:59,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:14:19] 2026-01-09 16:13:59,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:14:19] 2026-01-09 16:14:13,157 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:14:19] 2026-01-09 16:14:14,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140319482230592)>', '<ExcThread(monitor, started 140318729041664)>']
[2026-01-09 08:14:19] 2026-01-09 16:14:14,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:14:19] 2026-01-09 16:14:14,552 | INFO     | [monitor] control thread has ended
[2026-01-09 08:14:19] 2026-01-09 16:14:19,391 | INFO     | all workflow threads have been joined
[2026-01-09 08:14:19] 2026-01-09 16:14:19,392 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:14:19] 2026-01-09 16:14:19,392 | INFO     | traces error code: 0
[2026-01-09 08:14:19] 2026-01-09 16:14:19,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:14:19] 2026-01-09 16:14:19,515 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:14:19] 2026-01-09 16:14:19,517 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:14:19] 2026-01-09 16:14:19,519 [wrapper] pilotpid: 770411
[2026-01-09 08:14:19] 2026-01-09 16:14:19,521 [wrapper] Pilot exit status: 0
[2026-01-09 08:14:19] 2026-01-09 16:14:19,528 [wrapper] pandaids: 6963379703
[2026-01-09 08:14:19] 2026-01-09 16:14:19,570 [wrapper] cleanup supervisor_pilot  770417 770412
[2026-01-09 08:14:19] 2026-01-09 16:14:19,572 [wrapper] Test setup, not cleaning
[2026-01-09 08:14:19] 2026-01-09 16:14:19,575 [wrapper] apfmon messages muted
[2026-01-09 08:14:19] 2026-01-09 16:14:19,577 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:14:19] 2026-01-09 16:14:19,579 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:14:19]  *** Error codes and diagnostics ***
[2026-01-09 08:14:19]     "exeErrorCode": 65,
[2026-01-09 08:14:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 08:14:19]     "pilotErrorCode": 1305,
[2026-01-09 08:14:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 08:14:19]  *** Listing of results directory ***
[2026-01-09 08:14:19] total 386808
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:13 pilot3.tar.gz
[2026-01-09 08:14:19] -rwx------. 1 boinc boinc     36322 Jan  8 23:15 runpilot2-wrapper.sh
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:16 queuedata.json
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc       100 Jan  9 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:14:19] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 08:10 run_atlas
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc       105 Jan  9 08:10 job.xml
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc      6595 Jan  9 08:10 init_data.xml
[2026-01-09 08:14:19] -rw-r--r--. 2 boinc boinc 391896450 Jan  9 08:10 EVNT.47962006._000020.pool.root.1
[2026-01-09 08:14:19] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:10 start_atlas.sh
[2026-01-09 08:14:19] drwxrwx--x. 2 boinc boinc      4096 Jan  9 08:10 shared
[2026-01-09 08:14:19] -rw-r--r--. 2 boinc boinc    592608 Jan  9 08:10 input.tar.gz
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc         0 Jan  9 08:10 boinc_lockfile
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc      2892 Jan  9 08:10 pandaJob.out
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc    989377 Jan  9 08:10 agis_schedconf.cvmfs.json
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc   1516240 Jan  9 08:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:14:19] drwx------. 5 boinc boinc      4096 Jan  9 08:10 pilot3
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc       523 Jan  9 08:11 boinc_task_state.xml
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc       956 Jan  9 08:11 memory_monitor_summary.json
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc     47955 Jan  9 08:11 log.47962010._001460.job.log.tgz.1
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc        95 Jan  9 08:13 pilot_heartbeat.json
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc     10322 Jan  9 08:13 heartbeat.json
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc        23 Jan  9 08:14 wrapper_checkpoint.txt
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:14 boinc_mmap_file
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc      5008 Jan  9 08:14 pilotlog.txt
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc     90176 Jan  9 08:14 log.47962010._001460.job.log.1
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc       186 Jan  9 08:14 output.list
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:14 runtime_log
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc    163840 Jan  9 08:14 result.tar.gz
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc      8636 Jan  9 08:14 runtime_log.err
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc       645 Jan  9 08:14 o2HODmJtLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUWmKDmRQmSSm.diag
[2026-01-09 08:14:19] -rw-r--r--. 1 boinc boinc     22287 Jan  9 08:14 stderr.txt
[2026-01-09 08:14:19] No HITS result produced
[2026-01-09 08:14:19]  *** Contents of shared directory: ***
[2026-01-09 08:14:19] total 383472
[2026-01-09 08:14:19] -rw-r--r--. 2 boinc boinc 391896450 Jan  9 08:10 ATLAS.root_0
[2026-01-09 08:14:19] -rw-r--r--. 2 boinc boinc     15847 Jan  9 08:10 start_atlas.sh
[2026-01-09 08:14:19] -rw-r--r--. 2 boinc boinc    592608 Jan  9 08:10 input.tar.gz
[2026-01-09 08:14:19] -rw-------. 1 boinc boinc    163840 Jan  9 08:14 result.tar.gz
08:14:21 (766714): run_atlas exited; CPU time 39.730789
08:14:21 (766714): called boinc_finish(0)

</stderr_txt>
]]>

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