Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:57:09 (4090090): wrapper (7.7.26015): starting
07:57:09 (4090090): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:57:09] Arguments: --nthreads 8
[2026-01-09 07:57:09] Threads: 8
[2026-01-09 07:57:09] Checking for CVMFS
[2026-01-09 07:57:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:57:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:57:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:57:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:57:10] 2.11.3.0 1904511 56893 155856 154948 2 589 36556984 45568000 12817 130560 0 249852342 99.740 189181430 20438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-09 07:57:10] CVMFS is ok
[2026-01-09 07:57:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:57:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:57:10] Further information can be found at the LHC@home message board.
[2026-01-09 07:57:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:57:10] Checking for apptainer binary...
[2026-01-09 07:57:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:57:10] Running /usr/bin/apptainer --version
[2026-01-09 07:57:10] apptainer version 1.4.1-1.el9
[2026-01-09 07:57:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:57:10] wns0020.triumf.lcg
[2026-01-09 07:57:10] apptainer works
[2026-01-09 07:57:10] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:57:10] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:57:10] Starting ATLAS job with PandaID=6963375750
[2026-01-09 07:57:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:01:43]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | wrong length of table data, x=[1767974273.0, 1767974334.0], y=[1829.0, 717523.0] (must be same and length>=4)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | ..............................
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | . Timing measurements:
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . get job = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . initial setup = 3 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . payload setup = 6 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . stage-in = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . payload execution = 76 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . stage-out = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . log creation = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | ..............................
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963375750/pilotlog.txt
[2026-01-09 08:01:43] 2026-01-09 16:01:10,437 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 08:01:43] - Log from pilotlog.txt -
[2026-01-09 08:01:43] 2026-01-09 16:01:10,422 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963375750/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,422 | INFO     | extracted standard info from prmon json
[2026-01-09 08:01:43] 2026-01-09 16:01:10,422 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | wrong length of table data, x=[1767974273.0, 1767974334.0], y=[1829.0, 717523.0] (must be same and length>=4)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | ..............................
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | . Timing measurements:
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . get job = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . initial setup = 3 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . payload setup = 6 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . stage-in = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . payload execution = 76 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . stage-out = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . log creation = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | ..............................
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963375750/pilotlog.txt
[2026-01-09 08:01:43] 2026-01-09 16:01:10,437 | WARNING  | 
[2026-01-09 08:01:43] [begin log extracts]
[2026-01-09 08:01:43] - Log from pilotlog.txt -
[2026-01-09 08:01:43] 2026-01-09 16:01:10,422 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963375750/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,422 | INFO     | extracted standard info from prmon json
[2026-01-09 08:01:43] 2026-01-09 16:01:10,422 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:01:43] 2026-01-09 16:01:10,423 | WARNING  | wrong length of table data, x=[1767974273.0, 1767974334.0], y=[1829.0, 717523.0] (must be same and length>=4)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | ..............................
[2026-01-09 08:01:43] 2026-01-09 16:01:10,424 | INFO     | . Timing measurements:
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . get job = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . initial setup = 3 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . payload setup = 6 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . stage-in = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . payload execution = 76 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . stage-out = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | . log creation = 0 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | ..............................
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 08:01:43] 2026-01-09 16:01:10,425 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963375750/pilotlog.txt
[2026-01-09 08:01:43] [end log extracts]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,437 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,438 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 08:01:43] 2026-01-09 16:01:10,509 | INFO     | 
[2026-01-09 08:01:43] 2026-01-09 16:01:10,509 | INFO     | job summary report
[2026-01-09 08:01:43] 2026-01-09 16:01:10,509 | INFO     | --------------------------------------------------
[2026-01-09 08:01:43] 2026-01-09 16:01:10,509 | INFO     | PanDA job id: 6963375750
[2026-01-09 08:01:43] 2026-01-09 16:01:10,509 | INFO     | task id: 47962010
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 07:58:58,551 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | pilot state: failed 
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | transexitcode: 65
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | exeerrorcode: 65
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | exitcode: 65
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | cpuconsumptiontime: 49 s
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | nevents: 0
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | neventsw: 0
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | pid: 4100314
[2026-01-09 08:01:43] 2026-01-09 16:01:10,510 | INFO     | pgrp: 4100314
[2026-01-09 08:01:43] 2026-01-09 16:01:10,511 | INFO     | corecount: 8
[2026-01-09 08:01:43] 2026-01-09 16:01:10,511 | INFO     | event service: False
[2026-01-09 08:01:43] 2026-01-09 16:01:10,511 | INFO     | sizes: {0: 2284617, 5: 2284879, 11: 2284935, 86: 2310337, 87: 2314627, 88: 2314655, 210: 2314949}
[2026-01-09 08:01:43] 2026-01-09 16:01:10,511 | INFO     | --------------------------------------------------
[2026-01-09 08:01:43] 2026-01-09 16:01:10,511 | INFO     | 
[2026-01-09 08:01:43] 2026-01-09 16:01:10,511 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 08:01:43] 2026-01-09 16:01:10,535 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | job 6963375750 has completed (purged errors)
[2026-01-09 08:01:43] 2026-01-09 16:01:10,537 | INFO     | overall cleanup function is called
[2026-01-09 08:01:43] 2026-01-09 16:01:11,545 | INFO     | --- collectZombieJob: --- 10, [4100314]
[2026-01-09 08:01:43] 2026-01-09 16:01:11,545 | INFO     | zombie collector waiting for pid 4100314
[2026-01-09 08:01:43] 2026-01-09 16:01:11,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:01:43] 2026-01-09 16:01:11,545 | INFO     | collected zombie processes
[2026-01-09 08:01:43] 2026-01-09 16:01:11,545 | INFO     | will attempt to kill all subprocesses of pid=4100314
[2026-01-09 08:01:43] 2026-01-09 16:01:11,740 | INFO     | process IDs to be killed: [4100314] (in reverse order)
[2026-01-09 08:01:43] 2026-01-09 16:01:11,802 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:01:43] 2026-01-09 16:01:11,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:01:43] 2026-01-09 16:01:11,810 | INFO     | did not find any defunct processes belonging to 4100314
[2026-01-09 08:01:43] 2026-01-09 16:01:11,818 | INFO     | did not find any defunct processes belonging to 4100314
[2026-01-09 08:01:43] 2026-01-09 16:01:11,818 | INFO     | ready for new job
[2026-01-09 08:01:43] 2026-01-09 16:01:11,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:01:43] 2026-01-09 16:01:11,819 | INFO     | ***************************************
[2026-01-09 08:01:43] 2026-01-09 16:01:11,819 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:01:43] 2026-01-09 16:01:11,819 | INFO     | ***************************************
[2026-01-09 08:01:43] 2026-01-09 16:01:11,820 | INFO     | 
[2026-01-09 08:01:43] 2026-01-09 16:01:11,821 | INFO     | architecture information:
[2026-01-09 08:01:43] 2026-01-09 16:01:11,821 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:01:43] 2026-01-09 16:01:11,831 | INFO     | cat /etc/os-release:
[2026-01-09 08:01:43] NAME="CentOS Linux"
[2026-01-09 08:01:43] VERSION="7 (Core)"
[2026-01-09 08:01:43] ID="centos"
[2026-01-09 08:01:43] ID_LIKE="rhel fedora"
[2026-01-09 08:01:43] VERSION_ID="7"
[2026-01-09 08:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:01:43] ANSI_COLOR="0;31"
[2026-01-09 08:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:01:43] HOME_URL="https://www.centos.org/"
[2026-01-09 08:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:01:43] 
[2026-01-09 08:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:01:43] 
[2026-01-09 08:01:43] 2026-01-09 16:01:11,831 | INFO     | ***************************************
[2026-01-09 08:01:43] 2026-01-09 16:01:12,335 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 08:01:43] 2026-01-09 16:01:12,347 | INFO     | sufficient remaining disk space (1215657148416 B)
[2026-01-09 08:01:43] 2026-01-09 16:01:12,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:01:43] 2026-01-09 16:01:12,348 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:01:43] 2026-01-09 16:01:12,348 | INFO     | update_server=False
[2026-01-09 08:01:43] 2026-01-09 16:01:12,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:01:43] 2026-01-09 16:01:12,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:01:43] 2026-01-09 16:01:12,353 | INFO     | aborting loop
[2026-01-09 08:01:43] 2026-01-09 16:01:12,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:01:43] 2026-01-09 16:01:12,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:01:43] 2026-01-09 16:01:12,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:01:43] 2026-01-09 16:01:12,732 | INFO     | all payload control threads have been joined
[2026-01-09 08:01:43] 2026-01-09 16:01:12,833 | INFO     | all job control threads have been joined
[2026-01-09 08:01:43] 2026-01-09 16:01:13,306 | INFO     | all data control threads have been joined
[2026-01-09 08:01:43] 2026-01-09 16:01:13,355 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:13,359 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:13,359 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:13,470 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:13,738 | INFO     | [payload] control thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:13,823 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:13,839 | INFO     | [job] control thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:14,047 | INFO     | [job] validate thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:14,252 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:14,312 | INFO     | [data] control thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:14,320 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:14,353 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:14,360 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:14,546 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:14,711 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:16,367 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:01:43] 2026-01-09 16:01:22,419 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:01:43] 2026-01-09 16:01:23,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314505746240)>', '<ExcThread(monitor, started 140313687484160)>']
[2026-01-09 08:01:43] 2026-01-09 16:01:28,965 | INFO     | all workflow threads have been joined
[2026-01-09 08:01:43] 2026-01-09 16:01:28,965 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:01:43] 2026-01-09 16:01:28,965 | INFO     | traces error code: 0
[2026-01-09 08:01:43] 2026-01-09 16:01:28,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:01:43] 2026-01-09 16:01:43,011 | INFO     | PID=4093743 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:01:43] 2026-01-09 16:01:43,011 | INFO     | .. there are 26 such processes running
[2026-01-09 08:01:43] 2026-01-09 16:01:43,012 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:01:43] 2026-01-09 16:01:43,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:01:43] 2026-01-09 16:01:43,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:01:43] 2026-01-09 16:01:43,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:01:43] 2026-01-09 16:01:43,012 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 08:01:43] 2026-01-09 16:01:43,012 | INFO     | [monitor] control thread has ended
[2026-01-09 08:01:43] 2026-01-09 16:01:43,147 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:01:43] 2026-01-09 16:01:43,148 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:01:43] 2026-01-09 16:01:43,150 [wrapper] pilotpid: 4093743
[2026-01-09 08:01:43] 2026-01-09 16:01:43,152 [wrapper] Pilot exit status: 0
[2026-01-09 08:01:43] 2026-01-09 16:01:43,160 [wrapper] pandaids: 6963375750
[2026-01-09 08:01:43] 2026-01-09 16:01:43,197 [wrapper] cleanup supervisor_pilot 4093749 4093744
[2026-01-09 08:01:43] 2026-01-09 16:01:43,200 [wrapper] Test setup, not cleaning
[2026-01-09 08:01:43] 2026-01-09 16:01:43,202 [wrapper] apfmon messages muted
[2026-01-09 08:01:43] 2026-01-09 16:01:43,203 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:01:43] 2026-01-09 16:01:43,206 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:01:43]  *** Error codes and diagnostics ***
[2026-01-09 08:01:43]     "exeErrorCode": 65,
[2026-01-09 08:01:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 08:01:43]     "pilotErrorCode": 1305,
[2026-01-09 08:01:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 08:01:43]  *** Listing of results directory ***
[2026-01-09 08:01:43] total 388088
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:13 pilot3.tar.gz
[2026-01-09 08:01:43] -rwx------. 1 boinc boinc     36322 Jan  8 23:14 runpilot2-wrapper.sh
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:16 queuedata.json
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:01:43] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:57 run_atlas
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:57 job.xml
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc      6445 Jan  9 07:57 init_data.xml
[2026-01-09 08:01:43] -rw-r--r--. 2 boinc boinc 393209342 Jan  9 07:57 EVNT.47962006._000074.pool.root.1
[2026-01-09 08:01:43] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:57 start_atlas.sh
[2026-01-09 08:01:43] drwxrwx--x. 2 boinc boinc      4096 Jan  9 07:57 shared
[2026-01-09 08:01:43] -rw-r--r--. 2 boinc boinc    592609 Jan  9 07:57 input.tar.gz
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:57 boinc_lockfile
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc      2891 Jan  9 07:57 pandaJob.out
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc    989377 Jan  9 07:57 agis_schedconf.cvmfs.json
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc   1516240 Jan  9 07:57 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:01:43] drwx------. 5 boinc boinc      4096 Jan  9 07:57 pilot3
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc       523 Jan  9 07:58 boinc_task_state.xml
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc       982 Jan  9 07:59 memory_monitor_summary.json
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc     48310 Jan  9 07:59 log.47962010._000947.job.log.tgz.1
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc     10318 Jan  9 08:01 heartbeat.json
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc       893 Jan  9 08:01 pilotlog.txt
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc        95 Jan  9 08:01 pilot_heartbeat.json
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:01 boinc_mmap_file
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc        23 Jan  9 08:01 wrapper_checkpoint.txt
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc     93223 Jan  9 08:01 log.47962010._000947.job.log.1
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc       186 Jan  9 08:01 output.list
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:01 runtime_log
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc    163840 Jan  9 08:01 result.tar.gz
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc      8634 Jan  9 08:01 runtime_log.err
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc       645 Jan  9 08:01 2EuKDm7sLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9VmKDmFwXk4m.diag
[2026-01-09 08:01:43] -rw-r--r--. 1 boinc boinc     22330 Jan  9 08:01 stderr.txt
[2026-01-09 08:01:43] No HITS result produced
[2026-01-09 08:01:43]  *** Contents of shared directory: ***
[2026-01-09 08:01:43] total 384756
[2026-01-09 08:01:43] -rw-r--r--. 2 boinc boinc 393209342 Jan  9 07:57 ATLAS.root_0
[2026-01-09 08:01:43] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:57 start_atlas.sh
[2026-01-09 08:01:43] -rw-r--r--. 2 boinc boinc    592609 Jan  9 07:57 input.tar.gz
[2026-01-09 08:01:43] -rw-------. 1 boinc boinc    163840 Jan  9 08:01 result.tar.gz
08:01:45 (4090090): run_atlas exited; CPU time 49.882543
08:01:45 (4090090): called boinc_finish(0)

</stderr_txt>
]]>

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