Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:34:49 (1596944): wrapper (7.7.26015): starting
03:34:49 (1596944): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 03:34:49] Arguments: --nthreads 4
[2026-01-10 03:34:49] Threads: 4
[2026-01-10 03:34:49] Checking for CVMFS
[2026-01-10 03:34:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 03:34:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 03:34:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 03:34:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 03:34:50] 2.9.2.0 569242 3518 94244 154964 0 57 21179745 36864001 0 130560 0 2715631 99.990 130774 6756 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 03:34:50] CVMFS is ok
[2026-01-10 03:34:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 03:34:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 03:34:50] Further information can be found at the LHC@home message board.
[2026-01-10 03:34:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 03:34:50] Checking for apptainer binary...
[2026-01-10 03:34:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 03:34:50] Running /usr/bin/apptainer --version
[2026-01-10 03:34:50] apptainer version 1.4.1-1.1
[2026-01-10 03:34:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 03:34:50] thA369a
[2026-01-10 03:34:50] apptainer works
[2026-01-10 03:34:50] Set ATHENA_PROC_NUMBER=4
[2026-01-10 03:34:50] Set ATHENA_CORE_NUMBER=4
[2026-01-10 03:34:50] Starting ATLAS job with PandaID=6963375744
[2026-01-10 03:34:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:12:28]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:12:28] 2026-01-10 09:11:45,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:12:28] 2026-01-10 09:11:45,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:12:28] 2026-01-10 09:11:45,113 | INFO     | all data control threads have been joined
[2026-01-10 10:12:28] 2026-01-10 09:11:45,276 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 10:12:28] 2026-01-10 09:11:45,277 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 10:12:28] 2026-01-10 09:11:45,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:12:28] 2026-01-10 09:11:45,277 | INFO     | will abort loop
[2026-01-10 10:12:28] 2026-01-10 09:11:45,341 | INFO     | all job control threads have been joined
[2026-01-10 10:12:28] 2026-01-10 09:11:45,404 | INFO     | all payload control threads have been joined
[2026-01-10 10:12:28] 2026-01-10 09:11:46,085 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:46,086 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:46,119 | INFO     | [data] control thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:46,280 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:46,347 | INFO     | [job] control thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:46,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:12:28] 2026-01-10 09:11:46,410 | INFO     | [payload] control thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:46,473 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:46,623 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:46,755 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:47,086 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:47,145 | INFO     | [job] validate thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:47,386 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:47,436 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:47,471 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:47,471 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:11:50,377 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:12:28] 2026-01-10 09:12:22,406 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:12:28] 2026-01-10 09:12:23,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489859983168)>', '<ExcThread(monitor, started 140489370097408)>']
[2026-01-10 10:12:28] 2026-01-10 09:12:24,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:12:28] 2026-01-10 09:12:24,290 | INFO     | [monitor] control thread has ended
[2026-01-10 10:12:28] 2026-01-10 09:12:28,308 | INFO     | all workflow threads have been joined
[2026-01-10 10:12:28] 2026-01-10 09:12:28,309 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:12:28] 2026-01-10 09:12:28,309 | INFO     | traces error code: 0
[2026-01-10 10:12:28] 2026-01-10 09:12:28,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:12:28] 2026-01-10 09:12:28,362 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:12:28] 2026-01-10 09:12:28,365 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:12:28] 2026-01-10 09:12:28,367 [wrapper] pilotpid: 1600725
[2026-01-10 10:12:28] 2026-01-10 09:12:28,369 [wrapper] Pilot exit status: 0
[2026-01-10 10:12:28] 2026-01-10 09:12:28,377 [wrapper] pandaids: 6963375744
[2026-01-10 10:12:28] 2026-01-10 09:12:28,394 [wrapper] cleanup supervisor_pilot 1646179 1600726
[2026-01-10 10:12:28] 2026-01-10 09:12:28,396 [wrapper] Test setup, not cleaning
[2026-01-10 10:12:28] 2026-01-10 09:12:28,398 [wrapper] apfmon messages muted
[2026-01-10 10:12:28] 2026-01-10 09:12:28,401 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:12:28] 2026-01-10 09:12:28,403 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:12:28]  *** Error codes and diagnostics ***
[2026-01-10 10:12:28]     "exeErrorCode": 0,
[2026-01-10 10:12:28]     "exeErrorDiag": "",
[2026-01-10 10:12:28]     "pilotErrorCode": 0,
[2026-01-10 10:12:28]     "pilotErrorDiag": "",
[2026-01-10 10:12:28]  *** Listing of results directory ***
[2026-01-10 10:12:28] total 1198608
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 10:12:28] -rwx------ 1 boinc boinc     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc      5112 Jan  9 08:16 queuedata.json
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc       100 Jan 10 03:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:12:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 03:34 run_atlas
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc       105 Jan 10 03:34 job.xml
[2026-01-10 10:12:28] -rw-r--r-- 2 boinc boinc 392755774 Jan 10 03:34 EVNT.47962006._000073.pool.root.1
[2026-01-10 10:12:28] -rw-r--r-- 2 boinc boinc    592610 Jan 10 03:34 input.tar.gz
[2026-01-10 10:12:28] -rw-r--r-- 2 boinc boinc     15847 Jan 10 03:34 start_atlas.sh
[2026-01-10 10:12:28] drwxrwx--x 2 boinc boinc      4096 Jan 10 03:34 shared
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc         0 Jan 10 03:34 boinc_setup_complete
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc      6443 Jan 10 03:34 init_data.xml
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc         0 Jan 10 03:34 boinc_lockfile
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc      2891 Jan 10 03:34 pandaJob.out
[2026-01-10 10:12:28] -rw------- 1 boinc boinc    989382 Jan 10 03:34 agis_schedconf.cvmfs.json
[2026-01-10 10:12:28] drwx------ 5 boinc boinc      4096 Jan 10 03:34 pilot3
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc       531 Jan 10 10:07 boinc_task_state.xml
[2026-01-10 10:12:28] -rw------- 1 boinc boinc        95 Jan 10 10:10 pilot_heartbeat.json
[2026-01-10 10:12:28] -rw------- 1 boinc boinc 821563553 Jan 10 10:11 HITS.47962010._000941.pool.root.1
[2026-01-10 10:12:28] -rw------- 1 boinc boinc      1018 Jan 10 10:11 memory_monitor_summary.json
[2026-01-10 10:12:28] -rw------- 1 boinc boinc   1516240 Jan 10 10:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:12:28] -rw------- 1 boinc boinc   1211712 Jan 10 10:11 log.47962010._000941.job.log.tgz.1
[2026-01-10 10:12:28] -rw------- 1 boinc boinc      8552 Jan 10 10:11 heartbeat.json
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc      8192 Jan 10 10:12 boinc_mmap_file
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc        28 Jan 10 10:12 wrapper_checkpoint.txt
[2026-01-10 10:12:28] -rw------- 1 boinc boinc      4742 Jan 10 10:12 pilotlog.txt
[2026-01-10 10:12:28] -rw------- 1 boinc boinc   3362056 Jan 10 10:12 log.47962010._000941.job.log.1
[2026-01-10 10:12:28] -rw------- 1 boinc boinc       353 Jan 10 10:12 output.list
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc       620 Jan 10 10:12 runtime_log
[2026-01-10 10:12:28] -rw------- 1 boinc boinc   4597760 Jan 10 10:12 result.tar.gz
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc      8903 Jan 10 10:12 runtime_log.err
[2026-01-10 10:12:28] -rw------- 1 boinc boinc       666 Jan 10 10:12 SibKDm7sLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6VmKDmKwSuan.diag
[2026-01-10 10:12:28] -rw-r--r-- 1 boinc boinc      6857 Jan 10 10:12 stderr.txt
[2026-01-10 10:12:28] HITS file was successfully produced:
[2026-01-10 10:12:28] -rw------- 1 boinc boinc 821563553 Jan 10 10:11 shared/HITS.pool.root.1
[2026-01-10 10:12:28]  *** Contents of shared directory: ***
[2026-01-10 10:12:28] total 1190960
[2026-01-10 10:12:28] -rw-r--r-- 2 boinc boinc 392755774 Jan 10 03:34 ATLAS.root_0
[2026-01-10 10:12:28] -rw-r--r-- 2 boinc boinc    592610 Jan 10 03:34 input.tar.gz
[2026-01-10 10:12:28] -rw-r--r-- 2 boinc boinc     15847 Jan 10 03:34 start_atlas.sh
[2026-01-10 10:12:28] -rw------- 1 boinc boinc 821563553 Jan 10 10:11 HITS.pool.root.1
[2026-01-10 10:12:28] -rw------- 1 boinc boinc   4597760 Jan 10 10:12 result.tar.gz
10:12:30 (1596944): run_atlas exited; CPU time 93253.659172
10:12:30 (1596944): called boinc_finish(0)

</stderr_txt>
]]>

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