Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:38:45 (3833533): wrapper (7.7.26015): starting
14:38:45 (3833533): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:38:45] Arguments: --nthreads 8
[2026-01-09 14:38:45] Threads: 8
[2026-01-09 14:38:45] Checking for CVMFS
[2026-01-09 14:38:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:38:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:38:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:38:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:38:47] 2.13.3.0 12130 92144 354568 154955 3 187 36678373 40960000 11571 16776704 0 249469335 99.573 277961095 36826 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:38:47] CVMFS is ok
[2026-01-09 14:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:38:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:38:47] Further information can be found at the LHC@home message board.
[2026-01-09 14:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:38:47] Checking for apptainer binary...
[2026-01-09 14:38:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:38:47] Running /usr/bin/apptainer --version
[2026-01-09 14:38:47] apptainer version 1.4.5-2.el9
[2026-01-09 14:38:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:38:49] c6-5-7-4.aglt2.org
[2026-01-09 14:38:49] apptainer works
[2026-01-09 14:38:49] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:38:49] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:38:49] Starting ATLAS job with PandaID=6964062639
[2026-01-09 14:38:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:05:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:05:16] 2026-01-10 02:04:36,305 | INFO     | executing command: lscpu
[2026-01-09 21:05:16] 2026-01-10 02:04:36,356 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:05:16] 2026-01-10 02:04:36,599 | INFO     | time since job start (23048s) is within the limit (349056.0s)
[2026-01-09 21:05:16] 2026-01-10 02:04:38,364 | INFO     | monitor loop #1414: job 0:6964062639 is in state 'finished'
[2026-01-09 21:05:16] 2026-01-10 02:04:38,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:05:16] 2026-01-10 02:04:38,606 | INFO     | time since job start (23050s) is within the limit (349056.0s)
[2026-01-09 21:05:16] 2026-01-10 02:04:40,614 | INFO     | time since job start (23052s) is within the limit (349056.0s)
[2026-01-09 21:05:16] 2026-01-10 02:04:40,868 | INFO     | monitor loop #1415: job 0:6964062639 is in state 'finished'
[2026-01-09 21:05:16] 2026-01-10 02:04:40,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,652 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:05:16] 2026-01-10 02:04:41,660 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3079.5944464285712
[2026-01-09 21:05:16] 2026-01-10 02:04:41,670 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6964062639/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,670 | INFO     | extracted standard info from prmon json
[2026-01-09 21:05:16] 2026-01-10 02:04:41,670 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:05:16] 2026-01-10 02:04:41,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:05:16] 2026-01-10 02:04:41,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:05:16] 2026-01-10 02:04:41,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:05:16] 2026-01-10 02:04:41,677 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:05:16] 2026-01-10 02:04:41,677 | INFO     | sum of square deviations: 16352525080.59739
[2026-01-09 21:05:16] 2026-01-10 02:04:41,680 | INFO     | sum of deviations: 132202495115.12268
[2026-01-09 21:05:16] 2026-01-10 02:04:41,680 | INFO     | mean x: 1767999228.8693333
[2026-01-09 21:05:16] 2026-01-10 02:04:41,681 | INFO     | mean y: 2520186.4106666665
[2026-01-09 21:05:16] 2026-01-10 02:04:41,681 | INFO     | intersect: -14290924297.919697
[2026-01-09 21:05:16] 2026-01-10 02:04:41,681 | INFO     | chi2: 3.736273796999085
[2026-01-09 21:05:16] 2026-01-10 02:04:41,682 | INFO     | sum of square deviations: 15707158102.52972
[2026-01-09 21:05:16] 2026-01-10 02:04:41,684 | INFO     | sum of deviations: 154183184499.6756
[2026-01-09 21:05:16] 2026-01-10 02:04:41,685 | INFO     | mean x: 1767999076.372973
[2026-01-09 21:05:16] 2026-01-10 02:04:41,685 | INFO     | mean y: 2525318.5675675673
[2026-01-09 21:05:16] 2026-01-10 02:04:41,685 | INFO     | intersect: -17352347282.082397
[2026-01-09 21:05:16] 2026-01-10 02:04:41,685 | INFO     | chi2: 3.042102931521739
[2026-01-09 21:05:16] 2026-01-10 02:04:41,685 | INFO     | current chi2=3.042102931521739 (change=18.579229017822325 %)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,685 | INFO     | right removable region: 369
[2026-01-09 21:05:16] 2026-01-10 02:04:41,686 | INFO     | sum of square deviations: 15707027499.267569
[2026-01-09 21:05:16] 2026-01-10 02:04:41,689 | INFO     | sum of deviations: 33399246465.19993
[2026-01-09 21:05:16] 2026-01-10 02:04:41,689 | INFO     | mean x: 1767999381.381081
[2026-01-09 21:05:16] 2026-01-10 02:04:41,689 | INFO     | mean y: 2543484.8
[2026-01-09 21:05:16] 2026-01-10 02:04:41,689 | INFO     | intersect: -3756910497.936153
[2026-01-09 21:05:16] 2026-01-10 02:04:41,690 | INFO     | chi2: 1.162587159182091
[2026-01-09 21:05:16] 2026-01-10 02:04:41,690 | INFO     | current chi2=1.162587159182091 (change=68.88378040935163 %)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,690 | INFO     | sum of square deviations: 15078852026.695894
[2026-01-09 21:05:16] 2026-01-10 02:04:41,693 | INFO     | sum of deviations: 1660638105.4904099
[2026-01-09 21:05:16] 2026-01-10 02:04:41,693 | INFO     | mean x: 1767999533.879452
[2026-01-09 21:05:16] 2026-01-10 02:04:41,693 | INFO     | mean y: 2551167.8520547943
[2026-01-09 21:05:16] 2026-01-10 02:04:41,693 | INFO     | intersect: -192159105.2676453
[2026-01-09 21:05:16] 2026-01-10 02:04:41,693 | INFO     | chi2: 0.881115297557454
[2026-01-09 21:05:16] 2026-01-10 02:04:41,694 | INFO     | current chi2=0.881115297557454 (change=24.210818036443783 %)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,694 | INFO     | left removable region: 20
[2026-01-09 21:05:16] 2026-01-10 02:04:41,694 | INFO     | sum of square deviations: 13181576584.641787
[2026-01-09 21:05:16] 2026-01-10 02:04:41,696 | INFO     | sum of deviations: 13019148911.931236
[2026-01-09 21:05:16] 2026-01-10 02:04:41,696 | INFO     | mean x: 1767999655.8882523
[2026-01-09 21:05:16] 2026-01-10 02:04:41,696 | INFO     | mean y: 2559809.6905444125
[2026-01-09 21:05:16] 2026-01-10 02:04:41,696 | INFO     | intersect: -1743653979.5667334
[2026-01-09 21:05:16] 2026-01-10 02:04:41,697 | INFO     | chi2: 0.13542267992714835
[2026-01-09 21:05:16] 2026-01-10 02:04:41,697 | INFO     | current memory leak: 0.99 B/s (using 349 data points, chi2=0.14)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | could have reported an average CPU frequency of 3001 MHz (16 samples)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | ..............................
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | . Timing measurements:
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | . get job = 1 s
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | . initial setup = 6 s
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | . payload setup = 65 s
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | . stage-in = 0 s
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | . payload execution = 22879 s
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | . stage-out = 2 s
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | . log creation = 0 s
[2026-01-09 21:05:16] 2026-01-10 02:04:41,698 | INFO     | ..............................
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | 
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | job summary report
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | --------------------------------------------------
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | PanDA job id: 6964062639
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | task id: 47898826
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | errors: (none)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | pilot state: finished 
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | transexitcode: 0
[2026-01-09 21:05:16] 2026-01-10 02:04:41,898 | INFO     | exeerrorcode: 0
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | exeerrordiag: 
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | exitcode: 0
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | exitmsg: OK
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | cpuconsumptiontime: 55723 s
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | nevents: 400
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | neventsw: 0
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | pid: 3849924
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | pgrp: 3849924
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | corecount: 8
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | event service: False
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | sizes: {0: 2283750, 1: 2283778, 2: 2283977, 13: 2283977, 24: 2284033, 35: 2284061, 43: 2284479, 47: 2284507, 22949: 2319129, 22950: 2319128, 22953: 2328182, 22955:
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | --------------------------------------------------
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | 
[2026-01-09 21:05:16] 2026-01-10 02:04:41,899 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 21:05:16] 2026-01-10 02:04:41,975 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,975 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,977 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,977 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:05:16] 2026-01-10 02:04:41,977 | INFO     | job 6964062639 has completed (purged errors)
[2026-01-09 21:05:16] 2026-01-10 02:04:41,977 | INFO     | overall cleanup function is called
[2026-01-09 21:05:16] 2026-01-10 02:04:42,990 | INFO     | --- collectZombieJob: --- 10, [3849924]
[2026-01-09 21:05:16] 2026-01-10 02:04:42,990 | INFO     | zombie collector waiting for pid 3849924
[2026-01-09 21:05:16] 2026-01-10 02:04:42,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:05:16] 2026-01-10 02:04:42,990 | INFO     | collected zombie processes
[2026-01-09 21:05:16] 2026-01-10 02:04:42,990 | INFO     | will attempt to kill all subprocesses of pid=3849924
[2026-01-09 21:05:16] 2026-01-10 02:04:44,507 | INFO     | process IDs to be killed: [3849924] (in reverse order)
[2026-01-09 21:05:16] 2026-01-10 02:04:44,623 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:05:16] 2026-01-10 02:04:44,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:05:16] 2026-01-10 02:04:44,636 | INFO     | did not find any defunct processes belonging to 3849924
[2026-01-09 21:05:16] 2026-01-10 02:04:44,647 | INFO     | did not find any defunct processes belonging to 3849924
[2026-01-09 21:05:16] 2026-01-10 02:04:44,647 | INFO     | ready for new job
[2026-01-09 21:05:16] 2026-01-10 02:04:44,648 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:05:16] 2026-01-10 02:04:44,651 | INFO     | ***************************************
[2026-01-09 21:05:16] 2026-01-10 02:04:44,651 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:05:16] 2026-01-10 02:04:44,651 | INFO     | ***************************************
[2026-01-09 21:05:16] 2026-01-10 02:04:44,651 | INFO     | 
[2026-01-09 21:05:16] 2026-01-10 02:04:44,655 | INFO     | architecture information:
[2026-01-09 21:05:16] 2026-01-10 02:04:44,656 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:05:16] 2026-01-10 02:04:44,675 | INFO     | cat /etc/os-release:
[2026-01-09 21:05:16] NAME="CentOS Linux"
[2026-01-09 21:05:16] VERSION="7 (Core)"
[2026-01-09 21:05:16] ID="centos"
[2026-01-09 21:05:16] ID_LIKE="rhel fedora"
[2026-01-09 21:05:16] VERSION_ID="7"
[2026-01-09 21:05:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:05:16] ANSI_COLOR="0;31"
[2026-01-09 21:05:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:05:16] HOME_URL="https://www.centos.org/"
[2026-01-09 21:05:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:05:16] 
[2026-01-09 21:05:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:05:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:05:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:05:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:05:16] 
[2026-01-09 21:05:16] 2026-01-10 02:04:44,675 | INFO     | ***************************************
[2026-01-09 21:05:16] 2026-01-10 02:04:45,180 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 21:05:16] 2026-01-10 02:04:45,228 | INFO     | sufficient remaining disk space (74248617984 B)
[2026-01-09 21:05:16] 2026-01-10 02:04:45,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:05:16] 2026-01-10 02:04:45,229 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:05:16] 2026-01-10 02:04:45,229 | INFO     | update_server=False
[2026-01-09 21:05:16] 2026-01-10 02:04:45,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:05:16] 2026-01-10 02:04:45,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:05:16] 2026-01-10 02:04:45,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:05:16] 2026-01-10 02:04:45,239 | INFO     | aborting loop
[2026-01-09 21:05:16] 2026-01-10 02:04:45,310 | INFO     | all job control threads have been joined
[2026-01-09 21:05:16] 2026-01-10 02:04:45,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:05:16] 2026-01-10 02:04:46,231 | INFO     | all data control threads have been joined
[2026-01-09 21:05:16] 2026-01-10 02:04:46,237 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:46,245 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:46,253 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:46,267 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:46,297 | INFO     | all payload control threads have been joined
[2026-01-09 21:05:16] 2026-01-10 02:04:46,316 | INFO     | [job] control thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:46,324 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:46,521 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:46,701 | INFO     | [job] validate thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:46,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:05:16] 2026-01-10 02:04:47,015 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:47,237 | INFO     | [data] control thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:47,255 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:47,294 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:47,303 | INFO     | [payload] control thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:47,518 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:47,802 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:04:49,239 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:05:16] 2026-01-10 02:05:08,108 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:05:16] 2026-01-10 02:05:08,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673495922496)>', '<ExcThread(monitor, started 139673007552256)>']
[2026-01-09 21:05:16] 2026-01-10 02:05:13,442 | INFO     | all workflow threads have been joined
[2026-01-09 21:05:16] 2026-01-10 02:05:13,442 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:05:16] 2026-01-10 02:05:13,442 | INFO     | traces error code: 0
[2026-01-09 21:05:16] 2026-01-10 02:05:13,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:05:16] 2026-01-10 02:05:14,128 | INFO     | PID=3839794 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:05:16] 2026-01-10 02:05:14,129 | INFO     | .. there are 9 such processes running
[2026-01-09 21:05:16] 2026-01-10 02:05:14,129 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:05:16] 2026-01-10 02:05:14,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:05:16] 2026-01-10 02:05:14,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:05:16] 2026-01-10 02:05:14,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:05:16] 2026-01-10 02:05:14,129 | INFO     | [monitor] control thread has ended
[2026-01-09 21:05:16] 2026-01-10 02:05:14,307 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:05:16] 2026-01-10 02:05:14,338 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:05:16] 2026-01-10 02:05:14,388 [wrapper] pilotpid: 3839794
[2026-01-09 21:05:16] 2026-01-10 02:05:14,440 [wrapper] Pilot exit status: 0
[2026-01-09 21:05:16] 2026-01-10 02:05:14,659 [wrapper] pandaids: 6964062639
[2026-01-09 21:05:16] 2026-01-10 02:05:15,341 [wrapper] cleanup supervisor_pilot  464747 3839795
[2026-01-09 21:05:16] 2026-01-10 02:05:15,371 [wrapper] Test setup, not cleaning
[2026-01-09 21:05:16] 2026-01-10 02:05:15,403 [wrapper] apfmon messages muted
[2026-01-09 21:05:16] 2026-01-10 02:05:15,420 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:05:16] 2026-01-10 02:05:15,457 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:05:16]  *** Error codes and diagnostics ***
[2026-01-09 21:05:16]     "exeErrorCode": 0,
[2026-01-09 21:05:16]     "exeErrorDiag": "",
[2026-01-09 21:05:16]     "pilotErrorCode": 0,
[2026-01-09 21:05:16]     "pilotErrorDiag": "",
[2026-01-09 21:05:16]  *** Listing of results directory ***
[2026-01-09 21:05:16] total 453768
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-09 21:05:16] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:05:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:38 run_atlas
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:38 job.xml
[2026-01-09 21:05:16] -rw-r--r--. 2 boincer umatlas 226913546 Jan  9 14:38 EVNT.47898824._001146.pool.root.1
[2026-01-09 21:05:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:38 start_atlas.sh
[2026-01-09 21:05:16] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:38 shared
[2026-01-09 21:05:16] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 14:38 input.tar.gz
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:38 boinc_lockfile
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 14:38 pandaJob.out
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas        57 Jan  9 14:38 setup.sh.local
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas    989364 Jan  9 14:40 agis_schedconf.cvmfs.json
[2026-01-09 21:05:16] drwx------. 5 boincer umatlas      4096 Jan  9 14:40 pilot3
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas      6843 Jan  9 21:00 init_data.xml
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas 226954482 Jan  9 21:03 HITS.47898826._039918.pool.root.1
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:03 boinc_task_state.xml
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas      1039 Jan  9 21:04 memory_monitor_summary.json
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas        95 Jan  9 21:04 pilot_heartbeat.json
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas    552436 Jan  9 21:04 log.47898826._039918.job.log.tgz.1
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas      7816 Jan  9 21:04 heartbeat.json
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:05 boinc_mmap_file
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:05 wrapper_checkpoint.txt
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas       822 Jan  9 21:05 pilotlog.txt
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas   2888795 Jan  9 21:05 log.47898826._039918.job.log.1
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas       357 Jan  9 21:05 output.list
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:05 runtime_log
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas   3461120 Jan  9 21:05 result.tar.gz
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 21:05 runtime_log.err
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas       656 Jan  9 21:05 qatNDm6sLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrVmKDmuJwmNn.diag
[2026-01-09 21:05:16] -rw-r--r--. 1 boincer umatlas     21499 Jan  9 21:05 stderr.txt
[2026-01-09 21:05:16] HITS file was successfully produced:
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas 226954482 Jan  9 21:03 shared/HITS.pool.root.1
[2026-01-09 21:05:16]  *** Contents of shared directory: ***
[2026-01-09 21:05:16] total 447212
[2026-01-09 21:05:16] -rw-r--r--. 2 boincer umatlas 226913546 Jan  9 14:38 ATLAS.root_0
[2026-01-09 21:05:16] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:38 start_atlas.sh
[2026-01-09 21:05:16] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 14:38 input.tar.gz
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas 226954482 Jan  9 21:03 HITS.pool.root.1
[2026-01-09 21:05:16] -rw-------. 1 boincer umatlas   3461120 Jan  9 21:05 result.tar.gz
21:05:17 (3833533): run_atlas exited; CPU time 56280.372453
21:05:17 (3833533): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN