Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:20:47 (615307): wrapper (7.7.26015): starting
22:20:47 (615307): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 22:20:47] Arguments: --nthreads 12
[2026-01-10 22:20:47] Threads: 12
[2026-01-10 22:20:47] Checking for CVMFS
[2026-01-10 22:20:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 22:20:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 22:20:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 22:20:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 22:20:49] 2.13.3.0 40677 2428 59736 154994 2 97 3153001 4096001 10749 130560 0 13498775 99.961 304914 269 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-10 22:20:49] CVMFS is ok
[2026-01-10 22:20:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 22:20:49] Checking for apptainer binary...
[2026-01-10 22:20:49] apptainer is not installed, using version from CVMFS
[2026-01-10 22:20:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 22:20:51] epyc7v12
[2026-01-10 22:20:51] apptainer works
[2026-01-10 22:20:51] Set ATHENA_PROC_NUMBER=12
[2026-01-10 22:20:51] Set ATHENA_CORE_NUMBER=12
[2026-01-10 22:20:51] Starting ATLAS job with PandaID=6964046999
[2026-01-10 22:20:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:16:53]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:16:53] 2026-01-11 01:15:54,237 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 01:16:53] 2026-01-11 01:15:54,278 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2498.9134531249997
[2026-01-11 01:16:53] 2026-01-11 01:15:54,305 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6964046999/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,306 | INFO     | extracted standard info from prmon json
[2026-01-11 01:16:53] 2026-01-11 01:15:54,306 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 01:16:53] 2026-01-11 01:15:54,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 01:16:53] 2026-01-11 01:15:54,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 01:16:53] 2026-01-11 01:15:54,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 01:16:53] 2026-01-11 01:15:54,310 | INFO     | fitting pss+swap vs Time
[2026-01-11 01:16:53] 2026-01-11 01:15:54,311 | INFO     | sum of square deviations: 1523372126.4470532
[2026-01-11 01:16:53] 2026-01-11 01:15:54,312 | INFO     | sum of deviations: 6563591648.799996
[2026-01-11 01:16:53] 2026-01-11 01:15:54,312 | INFO     | mean x: 1768088916.517647
[2026-01-11 01:16:53] 2026-01-11 01:15:54,312 | INFO     | mean y: 2690294.9
[2026-01-11 01:16:53] 2026-01-11 01:15:54,312 | INFO     | intersect: -7615286590.2733755
[2026-01-11 01:16:53] 2026-01-11 01:15:54,313 | INFO     | chi2: 2.399108376715293
[2026-01-11 01:16:53] 2026-01-11 01:15:54,313 | INFO     | sum of square deviations: 1392868268.9454548
[2026-01-11 01:16:53] 2026-01-11 01:15:54,314 | INFO     | sum of deviations: 6639799629.072742
[2026-01-11 01:16:53] 2026-01-11 01:15:54,314 | INFO     | mean x: 1768088764.0181818
[2026-01-11 01:16:53] 2026-01-11 01:15:54,314 | INFO     | mean y: 2690383.309090909
[2026-01-11 01:16:53] 2026-01-11 01:15:54,314 | INFO     | intersect: -8425784427.437956
[2026-01-11 01:16:53] 2026-01-11 01:15:54,315 | INFO     | chi2: 2.401036957493338
[2026-01-11 01:16:53] 2026-01-11 01:15:54,315 | INFO     | current chi2=2.401036957493338 (change=-0.08038739711647323 %)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,315 | INFO     | right removable region: 164
[2026-01-11 01:16:53] 2026-01-11 01:15:54,315 | INFO     | sum of square deviations: 1392866438.9454548
[2026-01-11 01:16:53] 2026-01-11 01:15:54,316 | INFO     | sum of deviations: -30913472481.65453
[2026-01-11 01:16:53] 2026-01-11 01:15:54,316 | INFO     | mean x: 1768089069.0181818
[2026-01-11 01:16:53] 2026-01-11 01:15:54,317 | INFO     | mean y: 2733726.884848485
[2026-01-11 01:16:53] 2026-01-11 01:15:54,317 | INFO     | intersect: 39243949719.991394
[2026-01-11 01:16:53] 2026-01-11 01:15:54,317 | INFO     | chi2: 0.36796629502874234
[2026-01-11 01:16:53] 2026-01-11 01:15:54,317 | INFO     | current chi2=0.36796629502874234 (change=84.66237296321985 %)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,317 | INFO     | sum of square deviations: 1270035313.9437492
[2026-01-11 01:16:53] 2026-01-11 01:15:54,318 | INFO     | sum of deviations: -39725803314.406235
[2026-01-11 01:16:53] 2026-01-11 01:15:54,319 | INFO     | mean x: 1768089221.51875
[2026-01-11 01:16:53] 2026-01-11 01:15:54,319 | INFO     | mean y: 2744612.96875
[2026-01-11 01:16:53] 2026-01-11 01:15:54,319 | INFO     | intersect: 55307320702.4856
[2026-01-11 01:16:53] 2026-01-11 01:15:54,319 | INFO     | chi2: 0.21030988549250107
[2026-01-11 01:16:53] 2026-01-11 01:15:54,319 | INFO     | current chi2=0.21030988549250107 (change=42.84533982220478 %)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,319 | INFO     | sum of square deviations: 1154646188.9419298
[2026-01-11 01:16:53] 2026-01-11 01:15:54,320 | INFO     | sum of deviations: -34925654672.98065
[2026-01-11 01:16:53] 2026-01-11 01:15:54,321 | INFO     | mean x: 1768089374.0193548
[2026-01-11 01:16:53] 2026-01-11 01:15:54,321 | INFO     | mean y: 2738251.993548387
[2026-01-11 01:16:53] 2026-01-11 01:15:54,321 | INFO     | intersect: 53483778157.86567
[2026-01-11 01:16:53] 2026-01-11 01:15:54,321 | INFO     | chi2: 0.20823658776299578
[2026-01-11 01:16:53] 2026-01-11 01:15:54,321 | INFO     | current chi2=0.20823658776299578 (change=0.985829897938496 %)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,321 | INFO     | left removable region: 30
[2026-01-11 01:16:53] 2026-01-11 01:15:54,322 | INFO     | sum of square deviations: 746041195.4701473
[2026-01-11 01:16:53] 2026-01-11 01:15:54,322 | INFO     | sum of deviations: -15359462848.029852
[2026-01-11 01:16:53] 2026-01-11 01:15:54,322 | INFO     | mean x: 1768089648.5149255
[2026-01-11 01:16:53] 2026-01-11 01:15:54,323 | INFO     | mean y: 2710459.0149253733
[2026-01-11 01:16:53] 2026-01-11 01:15:54,323 | INFO     | intersect: 36404061260.07513
[2026-01-11 01:16:53] 2026-01-11 01:15:54,323 | INFO     | chi2: 0.15304260430733063
[2026-01-11 01:16:53] 2026-01-11 01:15:54,323 | INFO     | current memory leak: -20.59 B/s (using 134 data points, chi2=0.15)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,324 | INFO     | could have reported an average CPU frequency of 2503 MHz (9 samples)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,324 | INFO     | ..............................
[2026-01-11 01:16:53] 2026-01-11 01:15:54,324 | INFO     | . Timing measurements:
[2026-01-11 01:16:53] 2026-01-11 01:15:54,324 | INFO     | . get job = 0 s
[2026-01-11 01:16:53] 2026-01-11 01:15:54,324 | INFO     | . initial setup = 2 s
[2026-01-11 01:16:53] 2026-01-11 01:15:54,324 | INFO     | . payload setup = 19 s
[2026-01-11 01:16:53] 2026-01-11 01:15:54,324 | INFO     | . stage-in = 0 s
[2026-01-11 01:16:53] 2026-01-11 01:15:54,325 | INFO     | . payload execution = 10383 s
[2026-01-11 01:16:53] 2026-01-11 01:15:54,325 | INFO     | . stage-out = 1 s
[2026-01-11 01:16:53] 2026-01-11 01:15:54,325 | INFO     | . log creation = 0 s
[2026-01-11 01:16:53] 2026-01-11 01:15:54,325 | INFO     | ..............................
[2026-01-11 01:16:53] 2026-01-11 01:15:54,550 | INFO     | 
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | job summary report
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | --------------------------------------------------
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | PanDA job id: 6964046999
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | task id: 47898826
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | errors: (none)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | pilot state: finished 
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | transexitcode: 0
[2026-01-11 01:16:53] 2026-01-11 01:15:54,551 | INFO     | exeerrorcode: 0
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | exeerrordiag: 
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | exitcode: 0
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | exitmsg: OK
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | cpuconsumptiontime: 61327 s
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | nevents: 400
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | neventsw: 0
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | pid: 629115
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | pgrp: 629115
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | corecount: 12
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | event service: False
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | sizes: {0: 2283771, 1: 2283970, 12: 2283970, 15: 2284260, 23: 2284288, 10407: 2313523, 10411: 2322623, 10427: 2322825}
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | --------------------------------------------------
[2026-01-11 01:16:53] 2026-01-11 01:15:54,552 | INFO     | 
[2026-01-11 01:16:53] 2026-01-11 01:15:54,553 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-11 01:16:53] 2026-01-11 01:15:54,619 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,619 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,619 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,619 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,621 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,621 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 01:16:53] 2026-01-11 01:15:54,623 | INFO     | job 6964046999 has completed (purged errors)
[2026-01-11 01:16:53] 2026-01-11 01:15:54,623 | INFO     | overall cleanup function is called
[2026-01-11 01:16:53] 2026-01-11 01:15:55,644 | INFO     | --- collectZombieJob: --- 10, [629115]
[2026-01-11 01:16:53] 2026-01-11 01:15:55,644 | INFO     | zombie collector waiting for pid 629115
[2026-01-11 01:16:53] 2026-01-11 01:15:55,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 01:16:53] 2026-01-11 01:15:55,644 | INFO     | collected zombie processes
[2026-01-11 01:16:53] 2026-01-11 01:15:55,645 | INFO     | will attempt to kill all subprocesses of pid=629115
[2026-01-11 01:16:53] 2026-01-11 01:15:56,685 | INFO     | process IDs to be killed: [629115] (in reverse order)
[2026-01-11 01:16:53] 2026-01-11 01:15:57,290 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 01:16:53] 2026-01-11 01:15:57,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 01:16:53] 2026-01-11 01:15:57,331 | INFO     | did not find any defunct processes belonging to 629115
[2026-01-11 01:16:53] 2026-01-11 01:15:57,365 | INFO     | did not find any defunct processes belonging to 629115
[2026-01-11 01:16:53] 2026-01-11 01:15:57,365 | INFO     | ready for new job
[2026-01-11 01:16:53] 2026-01-11 01:15:57,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 01:16:53] 2026-01-11 01:15:57,371 | INFO     | ***************************************
[2026-01-11 01:16:53] 2026-01-11 01:15:57,373 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 01:16:53] 2026-01-11 01:15:57,373 | INFO     | ***************************************
[2026-01-11 01:16:53] 2026-01-11 01:15:57,373 | INFO     | 
[2026-01-11 01:16:53] 2026-01-11 01:15:57,389 | INFO     | architecture information:
[2026-01-11 01:16:53] 2026-01-11 01:15:57,409 | INFO     | executing command: cat /etc/os-release
[2026-01-11 01:16:53] 2026-01-11 01:15:57,470 | INFO     | cat /etc/os-release:
[2026-01-11 01:16:53] NAME="CentOS Linux"
[2026-01-11 01:16:53] VERSION="7 (Core)"
[2026-01-11 01:16:53] ID="centos"
[2026-01-11 01:16:53] ID_LIKE="rhel fedora"
[2026-01-11 01:16:53] VERSION_ID="7"
[2026-01-11 01:16:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:16:53] ANSI_COLOR="0;31"
[2026-01-11 01:16:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:16:53] HOME_URL="https://www.centos.org/"
[2026-01-11 01:16:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:16:53] 
[2026-01-11 01:16:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:16:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:16:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:16:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:16:53] 
[2026-01-11 01:16:53] 2026-01-11 01:15:57,471 | INFO     | ***************************************
[2026-01-11 01:16:53] 2026-01-11 01:15:57,973 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-11 01:16:53] 2026-01-11 01:15:58,027 | INFO     | sufficient remaining disk space (364770230272 B)
[2026-01-11 01:16:53] 2026-01-11 01:15:58,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:16:53] 2026-01-11 01:15:58,028 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:16:53] 2026-01-11 01:15:58,028 | INFO     | update_server=False
[2026-01-11 01:16:53] 2026-01-11 01:15:58,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:16:53] 2026-01-11 01:15:58,204 | INFO     | all payload control threads have been joined
[2026-01-11 01:16:53] 2026-01-11 01:15:58,243 | INFO     | all job control threads have been joined
[2026-01-11 01:16:53] 2026-01-11 01:15:58,270 | INFO     | all data control threads have been joined
[2026-01-11 01:16:53] 2026-01-11 01:15:58,351 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 01:16:53] 2026-01-11 01:15:58,351 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 01:16:53] 2026-01-11 01:15:58,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:16:53] 2026-01-11 01:15:58,352 | INFO     | will abort loop
[2026-01-11 01:16:53] 2026-01-11 01:15:58,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:16:53] 2026-01-11 01:15:59,039 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:16:53] 2026-01-11 01:15:59,209 | INFO     | [payload] control thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,254 | INFO     | [job] control thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,275 | INFO     | [data] control thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,325 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,327 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,343 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,356 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:16:53] 2026-01-11 01:15:59,853 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:15:59,952 | INFO     | [job] validate thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:16:00,288 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:16:00,352 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:16:00,458 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:16:00,570 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:16:01,176 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:16:02,365 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:16:53] 2026-01-11 01:16:26,930 | INFO     | PID=619518 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 01:16:53] 2026-01-11 01:16:26,931 | INFO     | .. there are 12 such processes running
[2026-01-11 01:16:53] 2026-01-11 01:16:26,931 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:16:53] 2026-01-11 01:16:26,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:16:53] 2026-01-11 01:16:26,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:16:53] 2026-01-11 01:16:45,112 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:16:53] 2026-01-11 01:16:46,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132717950437184)>', '<ExcThread(monitor, started 132717417056000)>']
[2026-01-11 01:16:53] 2026-01-11 01:16:47,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:16:53] 2026-01-11 01:16:47,073 | INFO     | [monitor] control thread has ended
[2026-01-11 01:16:53] 2026-01-11 01:16:51,904 | INFO     | all workflow threads have been joined
[2026-01-11 01:16:53] 2026-01-11 01:16:51,904 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:16:53] 2026-01-11 01:16:51,905 | INFO     | traces error code: 0
[2026-01-11 01:16:53] 2026-01-11 01:16:51,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:16:53] 2026-01-11 01:16:52,635 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:16:53] 2026-01-11 01:16:52,642 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:16:53] 2026-01-11 01:16:52,651 [wrapper] pilotpid: 619518
[2026-01-11 01:16:53] 2026-01-11 01:16:52,660 [wrapper] Pilot exit status: 0
[2026-01-11 01:16:53] 2026-01-11 01:16:52,691 [wrapper] pandaids: 6964046999
[2026-01-11 01:16:53] 2026-01-11 01:16:52,930 [wrapper] cleanup supervisor_pilot  849505 619519
[2026-01-11 01:16:53] 2026-01-11 01:16:52,940 [wrapper] Test setup, not cleaning
[2026-01-11 01:16:53] 2026-01-11 01:16:52,947 [wrapper] apfmon messages muted
[2026-01-11 01:16:53] 2026-01-11 01:16:52,956 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:16:53] 2026-01-11 01:16:52,964 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:16:53]  *** Error codes and diagnostics ***
[2026-01-11 01:16:53]     "exeErrorCode": 0,
[2026-01-11 01:16:53]     "exeErrorDiag": "",
[2026-01-11 01:16:53]     "pilotErrorCode": 0,
[2026-01-11 01:16:53]     "pilotErrorDiag": "",
[2026-01-11 01:16:53]  *** Listing of results directory ***
[2026-01-11 01:16:53] total 438952
[2026-01-11 01:16:53] -rw-r--r-- 1 boinc boinc    579449 Jan  9 07:13 pilot3.tar.gz
[2026-01-11 01:16:53] -rwx------ 1 boinc boinc     36322 Jan  9 07:14 runpilot2-wrapper.sh
[2026-01-11 01:16:53] -rw-r--r-- 1 boinc boinc      5112 Jan  9 07:16 queuedata.json
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc       100 Jan 10 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:16:53] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 22:20 run_atlas
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc       105 Jan 10 22:20 job.xml
[2026-01-11 01:16:53] -rw-r--r-- 2 boinc boinc 223225200 Jan 10 22:20 EVNT.47898824._000727.pool.root.1
[2026-01-11 01:16:53] -rw-r--r-- 2 boinc boinc     15847 Jan 10 22:20 start_atlas.sh
[2026-01-11 01:16:53] drwxrwx--x 2 boinc boinc      4096 Jan 10 22:20 shared
[2026-01-11 01:16:53] -rw-r--r-- 2 boinc boinc    592403 Jan 10 22:20 input.tar.gz
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc      7052 Jan 10 22:20 init_data.xml
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc         0 Jan 10 22:20 boinc_setup_complete
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc         0 Jan 10 22:20 boinc_lockfile
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc      2519 Jan 10 22:20 pandaJob.out
[2026-01-11 01:16:53] -rw------- 1 boinc boinc    989548 Jan 10 22:21 agis_schedconf.cvmfs.json
[2026-01-11 01:16:53] -rw------- 1 boinc boinc   1516240 Jan 10 22:21 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:16:53] drwx------ 5 boinc boinc      4096 Jan 10 22:21 pilot3
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc       531 Jan 11 01:14 boinc_task_state.xml
[2026-01-11 01:16:53] -rw------- 1 boinc boinc 218520161 Jan 11 01:14 HITS.47898826._039910.pool.root.1
[2026-01-11 01:16:53] -rw------- 1 boinc boinc      1032 Jan 11 01:15 memory_monitor_summary.json
[2026-01-11 01:16:53] -rw------- 1 boinc boinc    483082 Jan 11 01:15 log.47898826._039910.job.log.tgz.1
[2026-01-11 01:16:53] -rw------- 1 boinc boinc        95 Jan 11 01:15 pilot_heartbeat.json
[2026-01-11 01:16:53] -rw------- 1 boinc boinc      7737 Jan 11 01:15 heartbeat.json
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc        28 Jan 11 01:16 wrapper_checkpoint.txt
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc      8192 Jan 11 01:16 boinc_mmap_file
[2026-01-11 01:16:53] -rw------- 1 boinc boinc      5033 Jan 11 01:16 pilotlog.txt
[2026-01-11 01:16:53] -rw------- 1 boinc boinc   1429295 Jan 11 01:16 log.47898826._039910.job.log.1
[2026-01-11 01:16:53] -rw------- 1 boinc boinc       357 Jan 11 01:16 output.list
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc       620 Jan 11 01:16 runtime_log
[2026-01-11 01:16:53] -rw------- 1 boinc boinc   1935360 Jan 11 01:16 result.tar.gz
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc      9168 Jan 11 01:16 runtime_log.err
[2026-01-11 01:16:53] -rw------- 1 boinc boinc       655 Jan 11 01:16 TO4MDm6sLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjVmKDmbwUlJm.diag
[2026-01-11 01:16:53] -rw-rw-r-- 1 boinc boinc     20944 Jan 11 01:16 stderr.txt
[2026-01-11 01:16:53] HITS file was successfully produced:
[2026-01-11 01:16:53] -rw------- 1 boinc boinc 218520161 Jan 11 01:14 shared/HITS.pool.root.1
[2026-01-11 01:16:53]  *** Contents of shared directory: ***
[2026-01-11 01:16:53] total 433892
[2026-01-11 01:16:53] -rw-r--r-- 2 boinc boinc 223225200 Jan 10 22:20 ATLAS.root_0
[2026-01-11 01:16:53] -rw-r--r-- 2 boinc boinc     15847 Jan 10 22:20 start_atlas.sh
[2026-01-11 01:16:53] -rw-r--r-- 2 boinc boinc    592403 Jan 10 22:20 input.tar.gz
[2026-01-11 01:16:53] -rw------- 1 boinc boinc 218520161 Jan 11 01:14 HITS.pool.root.1
[2026-01-11 01:16:53] -rw------- 1 boinc boinc   1935360 Jan 11 01:16 result.tar.gz
01:16:54 (615307): run_atlas exited; CPU time 61863.317529
01:16:54 (615307): called boinc_finish(0)

</stderr_txt>
]]>

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