Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:46:42 (32072): wrapper (7.7.26015): starting
10:46:42 (32072): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 10:46:42] Arguments: --nthreads 12
[2026-01-09 10:46:42] Threads: 12
[2026-01-09 10:46:42] Checking for CVMFS
[2026-01-09 10:46:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:46:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:46:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:46:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:46:43] 2.11.2.0 723 181187 96020 154948 2 59 16473316 20275201 1 130560 0 70564369 99.901 10374240 36053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:46:43] CVMFS is ok
[2026-01-09 10:46:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:46:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:46:43] Further information can be found at the LHC@home message board.
[2026-01-09 10:46:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:46:43] Checking for apptainer binary...
[2026-01-09 10:46:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:46:43] Running /usr/bin/apptainer --version
[2026-01-09 10:46:43] apptainer version 1.3.2-1.el7
[2026-01-09 10:46:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:46:44] c-205-1.aglt2.org
[2026-01-09 10:46:44] apptainer works
[2026-01-09 10:46:44] Set ATHENA_PROC_NUMBER=12
[2026-01-09 10:46:44] Set ATHENA_CORE_NUMBER=12
[2026-01-09 10:46:44] Starting ATLAS job with PandaID=6963186833
[2026-01-09 10:46:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:28:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:28:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 12:28:17]  replicas=None
[2026-01-09 12:28:17]  scope=mc23_13p6TeV
[2026-01-09 12:28:17]  status=None
[2026-01-09 12:28:17]  status_code=0
[2026-01-09 12:28:17]  storage_token=
[2026-01-09 12:28:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963186833/log.47898826._036741.job.log.tgz.1
[2026-01-09 12:28:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/e1/log.47898826._036741.job.log.tgz.1
[2026-01-09 12:28:17]  workdir=None
[2026-01-09 12:28:17] ]
[2026-01-09 12:28:17] 2026-01-09 17:27:12,014 | INFO     | transferring file log.47898826._036741.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963186833/log.47898826._036741.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 12:28:17] 2026-01-09 17:27:12,014 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963186833/log.47898826._036741.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._036741.job
[2026-01-09 12:28:17] 2026-01-09 17:27:12,068 | INFO     | adding to output.list: log.47898826._036741.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/e1/log.47898826._036741.job.log.tg
[2026-01-09 12:28:17] 2026-01-09 17:27:12,069 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 12:28:17] 2026-01-09 17:27:12,069 | INFO     | summary of transferred files:
[2026-01-09 12:28:17] 2026-01-09 17:27:12,070 | INFO     |  -- lfn=log.47898826._036741.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 12:28:17] 2026-01-09 17:27:12,070 | INFO     | stage-out finished correctly
[2026-01-09 12:28:17] 2026-01-09 17:27:12,426 | INFO     | time since job start (6011s) is within the limit (349056.0s)
[2026-01-09 12:28:17] 2026-01-09 17:27:13,778 | INFO     | monitor loop #444: job 0:6963186833 is in state 'finished'
[2026-01-09 12:28:17] 2026-01-09 17:27:13,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:28:17] 2026-01-09 17:27:14,431 | INFO     | time since job start (6013s) is within the limit (349056.0s)
[2026-01-09 12:28:17] 2026-01-09 17:27:15,366 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 12:28:17] 2026-01-09 17:27:16,280 | INFO     | monitor loop #445: job 0:6963186833 is in state 'finished'
[2026-01-09 12:28:17] 2026-01-09 17:27:16,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:28:17] 2026-01-09 17:27:16,338 | INFO     | job 6963186833 has state=finished
[2026-01-09 12:28:17] 2026-01-09 17:27:16,338 | INFO     | preparing for final server update for job 6963186833 in state='finished'
[2026-01-09 12:28:17] 2026-01-09 17:27:16,339 | INFO     | this job has now completed (state=finished)
[2026-01-09 12:28:17] 2026-01-09 17:27:16,339 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 12:28:17] 2026-01-09 17:27:16,339 | INFO     | log transfer has been attempted: DONE
[2026-01-09 12:28:17] 2026-01-09 17:27:16,340 | INFO     | job 6963186833 has finished - writing final server update
[2026-01-09 12:28:17] 2026-01-09 17:27:16,340 | INFO     | total number of processed events: 400 (read)
[2026-01-09 12:28:17] 2026-01-09 17:27:16,341 | INFO     | executing command: lscpu
[2026-01-09 12:28:17] 2026-01-09 17:27:16,368 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 12:28:17] 2026-01-09 17:27:16,439 | INFO     | time since job start (6015s) is within the limit (349056.0s)
[2026-01-09 12:28:17] 2026-01-09 17:27:18,445 | INFO     | time since job start (6017s) is within the limit (349056.0s)
[2026-01-09 12:28:17] 2026-01-09 17:27:18,783 | INFO     | monitor loop #446: job 0:6963186833 is in state 'finished'
[2026-01-09 12:28:17] 2026-01-09 17:27:18,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:28:17] 2026-01-09 17:27:20,450 | INFO     | time since job start (6019s) is within the limit (349056.0s)
[2026-01-09 12:28:17] 2026-01-09 17:27:21,073 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 12:28:17] 2026-01-09 17:27:21,077 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-09 12:28:17] 2026-01-09 17:27:21,078 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963186833/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:28:17] 2026-01-09 17:27:21,079 | INFO     | extracted standard info from prmon json
[2026-01-09 12:28:17] 2026-01-09 17:27:21,079 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:28:17] 2026-01-09 17:27:21,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:28:17] 2026-01-09 17:27:21,079 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:28:17] 2026-01-09 17:27:21,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:28:17] 2026-01-09 17:27:21,081 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:28:17] 2026-01-09 17:27:21,081 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 12:28:17] 2026-01-09 17:27:21,082 | INFO     | sum of deviations: -12032925514.0
[2026-01-09 12:28:17] 2026-01-09 17:27:21,082 | INFO     | mean x: 1767976700.0
[2026-01-09 12:28:17] 2026-01-09 17:27:21,082 | INFO     | mean y: 2745483.2527472526
[2026-01-09 12:28:17] 2026-01-09 17:27:21,082 | INFO     | intersect: 91056448471.60992
[2026-01-09 12:28:17] 2026-01-09 17:27:21,082 | INFO     | chi2: 0.07877657142601774
[2026-01-09 12:28:17] 2026-01-09 17:27:21,083 | INFO     | current memory leak: -51.50 B/s (using 91 data points, chi2=0.08)
[2026-01-09 12:28:17] 2026-01-09 17:27:21,083 | INFO     | could have reported an average CPU frequency of 2117 MHz (7 samples)
[2026-01-09 12:28:17] 2026-01-09 17:27:21,083 | INFO     | ..............................
[2026-01-09 12:28:17] 2026-01-09 17:27:21,083 | INFO     | . Timing measurements:
[2026-01-09 12:28:17] 2026-01-09 17:27:21,083 | INFO     | . get job = 0 s
[2026-01-09 12:28:17] 2026-01-09 17:27:21,083 | INFO     | . initial setup = 2 s
[2026-01-09 12:28:17] 2026-01-09 17:27:21,083 | INFO     | . payload setup = 7 s
[2026-01-09 12:28:17] 2026-01-09 17:27:21,084 | INFO     | . stage-in = 0 s
[2026-01-09 12:28:17] 2026-01-09 17:27:21,084 | INFO     | . payload execution = 5982 s
[2026-01-09 12:28:17] 2026-01-09 17:27:21,084 | INFO     | . stage-out = 0 s
[2026-01-09 12:28:17] 2026-01-09 17:27:21,084 | INFO     | . log creation = 0 s
[2026-01-09 12:28:17] 2026-01-09 17:27:21,084 | INFO     | ..............................
[2026-01-09 12:28:17] 2026-01-09 17:27:21,164 | INFO     | 
[2026-01-09 12:28:17] 2026-01-09 17:27:21,164 | INFO     | job summary report
[2026-01-09 12:28:17] 2026-01-09 17:27:21,164 | INFO     | --------------------------------------------------
[2026-01-09 12:28:17] 2026-01-09 17:27:21,164 | INFO     | PanDA job id: 6963186833
[2026-01-09 12:28:17] 2026-01-09 17:27:21,165 | INFO     | task id: 47898826
[2026-01-09 12:28:17] 2026-01-09 17:27:21,165 | INFO     | errors: (none)
[2026-01-09 12:28:17] 2026-01-09 17:27:21,165 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:28:17] 2026-01-09 17:27:21,165 | INFO     | pilot state: finished 
[2026-01-09 12:28:17] 2026-01-09 17:27:21,165 | INFO     | transexitcode: 0
[2026-01-09 12:28:17] 2026-01-09 17:27:21,165 | INFO     | exeerrorcode: 0
[2026-01-09 12:28:17] 2026-01-09 17:27:21,166 | INFO     | exeerrordiag: 
[2026-01-09 12:28:17] 2026-01-09 17:27:21,166 | INFO     | exitcode: 0
[2026-01-09 12:28:17] 2026-01-09 17:27:21,166 | INFO     | exitmsg: OK
[2026-01-09 12:28:17] 2026-01-09 17:27:21,166 | INFO     | cpuconsumptiontime: 66132 s
[2026-01-09 12:28:17] 2026-01-09 17:27:21,166 | INFO     | nevents: 400
[2026-01-09 12:28:17] 2026-01-09 17:27:21,166 | INFO     | neventsw: 0
[2026-01-09 12:28:17] 2026-01-09 17:27:21,167 | INFO     | pid: 10352
[2026-01-09 12:28:17] 2026-01-09 17:27:21,167 | INFO     | pgrp: 10352
[2026-01-09 12:28:17] 2026-01-09 17:27:21,167 | INFO     | corecount: 12
[2026-01-09 12:28:17] 2026-01-09 17:27:21,167 | INFO     | event service: False
[2026-01-09 12:28:17] 2026-01-09 17:27:21,167 | INFO     | sizes: {0: 2283970, 5: 2284232, 11: 2284288, 5993: 2311011, 5994: 2320009, 5998: 2320065, 6003: 2320387}
[2026-01-09 12:28:17] 2026-01-09 17:27:21,167 | INFO     | --------------------------------------------------
[2026-01-09 12:28:17] 2026-01-09 17:27:21,167 | INFO     | 
[2026-01-09 12:28:17] 2026-01-09 17:27:21,168 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 12:28:17] 2026-01-09 17:27:21,190 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,190 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,191 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,191 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,193 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:28:17] 2026-01-09 17:27:21,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,194 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:28:17] 2026-01-09 17:27:21,194 | INFO     | job 6963186833 has completed (purged errors)
[2026-01-09 12:28:17] 2026-01-09 17:27:21,194 | INFO     | overall cleanup function is called
[2026-01-09 12:28:17] 2026-01-09 17:27:22,200 | INFO     | --- collectZombieJob: --- 10, [10352]
[2026-01-09 12:28:17] 2026-01-09 17:27:22,200 | INFO     | zombie collector waiting for pid 10352
[2026-01-09 12:28:17] 2026-01-09 17:27:22,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:28:17] 2026-01-09 17:27:22,200 | INFO     | collected zombie processes
[2026-01-09 12:28:17] 2026-01-09 17:27:22,200 | INFO     | will attempt to kill all subprocesses of pid=10352
[2026-01-09 12:28:17] 2026-01-09 17:27:22,295 | INFO     | process IDs to be killed: [10352] (in reverse order)
[2026-01-09 12:28:17] 2026-01-09 17:27:22,348 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:28:17] 2026-01-09 17:27:22,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:28:17] 2026-01-09 17:27:22,352 | INFO     | did not find any defunct processes belonging to 10352
[2026-01-09 12:28:17] 2026-01-09 17:27:22,356 | INFO     | did not find any defunct processes belonging to 10352
[2026-01-09 12:28:17] 2026-01-09 17:27:22,356 | INFO     | ready for new job
[2026-01-09 12:28:17] 2026-01-09 17:27:22,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:28:17] 2026-01-09 17:27:22,357 | INFO     | ***************************************
[2026-01-09 12:28:17] 2026-01-09 17:27:22,358 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:28:17] 2026-01-09 17:27:22,358 | INFO     | ***************************************
[2026-01-09 12:28:17] 2026-01-09 17:27:22,358 | INFO     | 
[2026-01-09 12:28:17] 2026-01-09 17:27:22,358 | INFO     | architecture information:
[2026-01-09 12:28:17] 2026-01-09 17:27:22,359 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:28:17] 2026-01-09 17:27:22,372 | INFO     | cat /etc/os-release:
[2026-01-09 12:28:17] NAME="CentOS Linux"
[2026-01-09 12:28:17] VERSION="7 (Core)"
[2026-01-09 12:28:17] ID="centos"
[2026-01-09 12:28:17] ID_LIKE="rhel fedora"
[2026-01-09 12:28:17] VERSION_ID="7"
[2026-01-09 12:28:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:28:17] ANSI_COLOR="0;31"
[2026-01-09 12:28:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:28:17] HOME_URL="https://www.centos.org/"
[2026-01-09 12:28:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:28:17] 
[2026-01-09 12:28:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:28:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:28:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:28:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:28:17] 
[2026-01-09 12:28:17] 2026-01-09 17:27:22,373 | INFO     | ***************************************
[2026-01-09 12:28:17] 2026-01-09 17:27:22,875 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 12:28:17] 2026-01-09 17:27:22,892 | INFO     | sufficient remaining disk space (29440868352 B)
[2026-01-09 12:28:17] 2026-01-09 17:27:22,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:28:17] 2026-01-09 17:27:22,893 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:28:17] 2026-01-09 17:27:22,893 | INFO     | update_server=False
[2026-01-09 12:28:17] 2026-01-09 17:27:22,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:28:17] 2026-01-09 17:27:22,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:28:17] 2026-01-09 17:27:22,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:28:17] 2026-01-09 17:27:22,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:28:17] 2026-01-09 17:27:22,894 | INFO     | aborting loop
[2026-01-09 12:28:17] 2026-01-09 17:27:23,205 | INFO     | all job control threads have been joined
[2026-01-09 12:28:17] 2026-01-09 17:27:23,614 | INFO     | all data control threads have been joined
[2026-01-09 12:28:17] 2026-01-09 17:27:23,895 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:23,898 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:23,899 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:24,023 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:24,073 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:24,211 | INFO     | [job] control thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:24,326 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:24,334 | INFO     | all payload control threads have been joined
[2026-01-09 12:28:17] 2026-01-09 17:27:24,582 | INFO     | [job] validate thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:24,619 | INFO     | [data] control thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:24,898 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:24,906 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:25,030 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:25,134 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:25,335 | INFO     | [payload] control thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:25,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:28:17] 2026-01-09 17:27:29,955 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:33,581 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:28:17] 2026-01-09 17:27:34,587 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:28:17] 2026-01-09 17:27:53,654 | INFO     | PID=3905 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 12:28:17] 2026-01-09 17:27:53,654 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:28:17] 2026-01-09 17:27:53,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:28:17] 2026-01-09 17:27:53,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:28:17] 2026-01-09 17:28:10,580 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:28:17] 2026-01-09 17:28:11,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435266529088)>', '<ExcThread(monitor, started 140434542155520)>']
[2026-01-09 12:28:17] 2026-01-09 17:28:12,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:28:17] 2026-01-09 17:28:12,741 | INFO     | [monitor] control thread has ended
[2026-01-09 12:28:17] 2026-01-09 17:28:16,926 | INFO     | all workflow threads have been joined
[2026-01-09 12:28:17] 2026-01-09 17:28:16,926 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:28:17] 2026-01-09 17:28:16,926 | INFO     | traces error code: 0
[2026-01-09 12:28:17] 2026-01-09 17:28:16,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:28:17] 2026-01-09 17:28:17,010 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:28:17] 2026-01-09 17:28:17,014 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:28:17] 2026-01-09 17:28:17,019 [wrapper] pilotpid: 3905
[2026-01-09 12:28:17] 2026-01-09 17:28:17,022 [wrapper] Pilot exit status: 0
[2026-01-09 12:28:17] 2026-01-09 17:28:17,038 [wrapper] pandaids: 6963186833
[2026-01-09 12:28:17] 2026-01-09 17:28:17,086 [wrapper] cleanup supervisor_pilot 17932 3906
[2026-01-09 12:28:17] 2026-01-09 17:28:17,090 [wrapper] Test setup, not cleaning
[2026-01-09 12:28:17] 2026-01-09 17:28:17,094 [wrapper] apfmon messages muted
[2026-01-09 12:28:17] 2026-01-09 17:28:17,098 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:28:17] 2026-01-09 17:28:17,101 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:28:17]  *** Error codes and diagnostics ***
[2026-01-09 12:28:17]     "exeErrorCode": 0,
[2026-01-09 12:28:17]     "exeErrorDiag": "",
[2026-01-09 12:28:17]     "pilotErrorCode": 0,
[2026-01-09 12:28:17]     "pilotErrorDiag": "",
[2026-01-09 12:28:17]  *** Listing of results directory ***
[2026-01-09 12:28:17] total 435576
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 12:28:17] -rwx------ 1 boincer umatlas     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:01 queuedata.json
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas       100 Jan  9 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:28:17] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 10:46 run_atlas
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas       105 Jan  9 10:46 job.xml
[2026-01-09 12:28:17] -rw-r--r-- 2 boincer umatlas 223557319 Jan  9 10:46 EVNT.47898824._001408.pool.root.1
[2026-01-09 12:28:17] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:46 start_atlas.sh
[2026-01-09 12:28:17] drwxrwx--x 2 boincer umatlas      4096 Jan  9 10:46 shared
[2026-01-09 12:28:17] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 10:46 input.tar.gz
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas         0 Jan  9 10:46 boinc_lockfile
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 10:46 pandaJob.out
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas        57 Jan  9 10:46 setup.sh.local
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas    989377 Jan  9 10:46 agis_schedconf.cvmfs.json
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas   1516240 Jan  9 10:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:28:17] drwx------ 5 boincer umatlas      4096 Jan  9 10:47 pilot3
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 12:22 init_data.xml
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas 216017908 Jan  9 12:26 HITS.47898826._036741.pool.root.1
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas       529 Jan  9 12:27 boinc_task_state.xml
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas      1047 Jan  9 12:27 memory_monitor_summary.json
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas    413825 Jan  9 12:27 log.47898826._036741.job.log.tgz.1
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas      7851 Jan  9 12:27 heartbeat.json
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas        95 Jan  9 12:27 pilot_heartbeat.json
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 12:28 boinc_mmap_file
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas        27 Jan  9 12:28 wrapper_checkpoint.txt
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas      4817 Jan  9 12:28 pilotlog.txt
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas    854088 Jan  9 12:28 log.47898826._036741.job.log.1
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas       357 Jan  9 12:28 output.list
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas       620 Jan  9 12:28 runtime_log
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas   1290240 Jan  9 12:28 result.tar.gz
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas       659 Jan  9 12:28 yGPMDmO0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGggKDmUituom.diag
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas      9339 Jan  9 12:28 runtime_log.err
[2026-01-09 12:28:17] -rw-r--r-- 1 boincer umatlas     21900 Jan  9 12:28 stderr.txt
[2026-01-09 12:28:17] HITS file was successfully produced:
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas 216017908 Jan  9 12:26 shared/HITS.pool.root.1
[2026-01-09 12:28:17]  *** Contents of shared directory: ***
[2026-01-09 12:28:17] total 431136
[2026-01-09 12:28:17] -rw-r--r-- 2 boincer umatlas 223557319 Jan  9 10:46 ATLAS.root_0
[2026-01-09 12:28:17] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:46 start_atlas.sh
[2026-01-09 12:28:17] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 10:46 input.tar.gz
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas 216017908 Jan  9 12:26 HITS.pool.root.1
[2026-01-09 12:28:17] -rw------- 1 boincer umatlas   1290240 Jan  9 12:28 result.tar.gz
12:28:18 (32072): run_atlas exited; CPU time 66100.986475
12:28:18 (32072): called boinc_finish(0)

</stderr_txt>
]]>

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