Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:48:39 (15325): wrapper (7.7.26015): starting
10:48:39 (15325): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:48:39] Arguments: --nthreads 8
[2026-01-09 10:48:39] Threads: 8
[2026-01-09 10:48:39] Checking for CVMFS
[2026-01-09 10:48:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:48:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:48:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:48:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:48:40] 2.11.2.0 4329 29903 149164 154948 3 132 6140046 18432000 1739 130560 0 7568337 99.780 2000397 22882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:48:40] CVMFS is ok
[2026-01-09 10:48:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:48:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:48:40] Further information can be found at the LHC@home message board.
[2026-01-09 10:48:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:48:40] Checking for apptainer binary...
[2026-01-09 10:48:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:48:40] Running /usr/bin/apptainer --version
[2026-01-09 10:48:40] apptainer version 1.3.2-1.el7
[2026-01-09 10:48:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:48:41] c-206-17.aglt2.org
[2026-01-09 10:48:41] apptainer works
[2026-01-09 10:48:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:48:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:48:41] Starting ATLAS job with PandaID=6963186889
[2026-01-09 10:48:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:21:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:21:48] 2026-01-09 20:21:15,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,131 | INFO     | time since job start (16343s) is within the limit (349056.0s)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,944 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 15:21:48] 2026-01-09 20:21:15,951 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2550.0416666666665
[2026-01-09 15:21:48] 2026-01-09 20:21:15,955 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963186889/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,956 | INFO     | extracted standard info from prmon json
[2026-01-09 15:21:48] 2026-01-09 20:21:15,956 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:21:48] 2026-01-09 20:21:15,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:21:48] 2026-01-09 20:21:15,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:21:48] 2026-01-09 20:21:15,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:21:48] 2026-01-09 20:21:15,964 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:21:48] 2026-01-09 20:21:15,965 | INFO     | sum of square deviations: 5968658887.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,967 | INFO     | sum of deviations: 382533927.9999962
[2026-01-09 15:21:48] 2026-01-09 20:21:15,968 | INFO     | mean x: 1767981900.5
[2026-01-09 15:21:48] 2026-01-09 20:21:15,968 | INFO     | mean y: 2514292.4925373136
[2026-01-09 15:21:48] 2026-01-09 20:21:15,968 | INFO     | intersect: -110796431.71457104
[2026-01-09 15:21:48] 2026-01-09 20:21:15,969 | INFO     | chi2: 2.242423353647471
[2026-01-09 15:21:48] 2026-01-09 20:21:15,969 | INFO     | sum of square deviations: 5640782972.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,972 | INFO     | sum of deviations: 18253662936.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,972 | INFO     | mean x: 1767981748.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,972 | INFO     | mean y: 2522479.0152091254
[2026-01-09 15:21:48] 2026-01-09 20:21:15,972 | INFO     | intersect: -5718694427.429546
[2026-01-09 15:21:48] 2026-01-09 20:21:15,973 | INFO     | chi2: 1.4702482124744918
[2026-01-09 15:21:48] 2026-01-09 20:21:15,973 | INFO     | current chi2=1.4702482124744918 (change=34.434851024762025 %)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,973 | INFO     | sum of square deviations: 5325139844.5
[2026-01-09 15:21:48] 2026-01-09 20:21:15,976 | INFO     | sum of deviations: 17681520329.000004
[2026-01-09 15:21:48] 2026-01-09 20:21:15,976 | INFO     | mean x: 1767981595.5
[2026-01-09 15:21:48] 2026-01-09 20:21:15,976 | INFO     | mean y: 2522202.5581395347
[2026-01-09 15:21:48] 2026-01-09 20:21:15,976 | INFO     | intersect: -5867859315.106266
[2026-01-09 15:21:48] 2026-01-09 20:21:15,977 | INFO     | chi2: 1.4706434844736362
[2026-01-09 15:21:48] 2026-01-09 20:21:15,977 | INFO     | current chi2=1.4706434844736362 (change=-0.026884712104441478 %)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,977 | INFO     | right removable region: 257
[2026-01-09 15:21:48] 2026-01-09 20:21:15,978 | INFO     | sum of square deviations: 5640782972.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,980 | INFO     | sum of deviations: -37616265001.99999
[2026-01-09 15:21:48] 2026-01-09 20:21:15,980 | INFO     | mean x: 1767982053.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,981 | INFO     | mean y: 2531805.174904943
[2026-01-09 15:21:48] 2026-01-09 20:21:15,981 | INFO     | intersect: 11792540701.90932
[2026-01-09 15:21:48] 2026-01-09 20:21:15,981 | INFO     | chi2: 0.9249292026385935
[2026-01-09 15:21:48] 2026-01-09 20:21:15,981 | INFO     | current chi2=0.9249292026385935 (change=58.75314083158622 %)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,982 | INFO     | sum of square deviations: 5325139844.5
[2026-01-09 15:21:48] 2026-01-09 20:21:15,984 | INFO     | sum of deviations: -39530003606.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,984 | INFO     | mean x: 1767982205.5
[2026-01-09 15:21:48] 2026-01-09 20:21:15,985 | INFO     | mean y: 2532714.2868217053
[2026-01-09 15:21:48] 2026-01-09 20:21:15,985 | INFO     | intersect: 13126759495.099363
[2026-01-09 15:21:48] 2026-01-09 20:21:15,985 | INFO     | chi2: 0.9106961125418185
[2026-01-09 15:21:48] 2026-01-09 20:21:15,985 | INFO     | current chi2=0.9106961125418185 (change=1.538830221401974 %)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,986 | INFO     | left removable region: 20
[2026-01-09 15:21:48] 2026-01-09 20:21:15,986 | INFO     | sum of square deviations: 4127772278.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,988 | INFO     | sum of deviations: -6233910005.999999
[2026-01-09 15:21:48] 2026-01-09 20:21:15,988 | INFO     | mean x: 1767982175.0
[2026-01-09 15:21:48] 2026-01-09 20:21:15,988 | INFO     | mean y: 2533211.0084388186
[2026-01-09 15:21:48] 2026-01-09 20:21:15,989 | INFO     | intersect: 2672603415.6812315
[2026-01-09 15:21:48] 2026-01-09 20:21:15,989 | INFO     | chi2: 0.07194459546069847
[2026-01-09 15:21:48] 2026-01-09 20:21:15,989 | INFO     | current memory leak: -1.51 B/s (using 237 data points, chi2=0.07)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,990 | INFO     | could have reported an average CPU frequency of 2591 MHz (12 samples)
[2026-01-09 15:21:48] 2026-01-09 20:21:15,990 | INFO     | ..............................
[2026-01-09 15:21:48] 2026-01-09 20:21:15,990 | INFO     | . Timing measurements:
[2026-01-09 15:21:48] 2026-01-09 20:21:15,990 | INFO     | . get job = 0 s
[2026-01-09 15:21:48] 2026-01-09 20:21:15,990 | INFO     | . initial setup = 2 s
[2026-01-09 15:21:48] 2026-01-09 20:21:15,990 | INFO     | . payload setup = 5 s
[2026-01-09 15:21:48] 2026-01-09 20:21:15,991 | INFO     | . stage-in = 0 s
[2026-01-09 15:21:48] 2026-01-09 20:21:15,991 | INFO     | . payload execution = 16311 s
[2026-01-09 15:21:48] 2026-01-09 20:21:15,991 | INFO     | . stage-out = 2 s
[2026-01-09 15:21:48] 2026-01-09 20:21:15,991 | INFO     | . log creation = 0 s
[2026-01-09 15:21:48] 2026-01-09 20:21:15,991 | INFO     | ..............................
[2026-01-09 15:21:48] 2026-01-09 20:21:16,128 | INFO     | 
[2026-01-09 15:21:48] 2026-01-09 20:21:16,129 | INFO     | job summary report
[2026-01-09 15:21:48] 2026-01-09 20:21:16,129 | INFO     | --------------------------------------------------
[2026-01-09 15:21:48] 2026-01-09 20:21:16,129 | INFO     | PanDA job id: 6963186889
[2026-01-09 15:21:48] 2026-01-09 20:21:16,129 | INFO     | task id: 47898826
[2026-01-09 15:21:48] 2026-01-09 20:21:16,129 | INFO     | errors: (none)
[2026-01-09 15:21:48] 2026-01-09 20:21:16,129 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:21:48] 2026-01-09 20:21:16,130 | INFO     | pilot state: finished 
[2026-01-09 15:21:48] 2026-01-09 20:21:16,130 | INFO     | transexitcode: 0
[2026-01-09 15:21:48] 2026-01-09 20:21:16,130 | INFO     | exeerrorcode: 0
[2026-01-09 15:21:48] 2026-01-09 20:21:16,130 | INFO     | exeerrordiag: 
[2026-01-09 15:21:48] 2026-01-09 20:21:16,130 | INFO     | exitcode: 0
[2026-01-09 15:21:48] 2026-01-09 20:21:16,130 | INFO     | exitmsg: OK
[2026-01-09 15:21:48] 2026-01-09 20:21:16,130 | INFO     | cpuconsumptiontime: 123078 s
[2026-01-09 15:21:48] 2026-01-09 20:21:16,131 | INFO     | nevents: 400
[2026-01-09 15:21:48] 2026-01-09 20:21:16,131 | INFO     | neventsw: 0
[2026-01-09 15:21:48] 2026-01-09 20:21:16,131 | INFO     | pid: 25777
[2026-01-09 15:21:48] 2026-01-09 20:21:16,131 | INFO     | pgrp: 25777
[2026-01-09 15:21:48] 2026-01-09 20:21:16,131 | INFO     | corecount: 8
[2026-01-09 15:21:48] 2026-01-09 20:21:16,131 | INFO     | event service: False
[2026-01-09 15:21:48] 2026-01-09 20:21:16,131 | INFO     | sizes: {0: 2283799, 1: 2283998, 4: 2284260, 12: 2284288, 16320: 2315605, 16323: 2324787, 16329: 2324925}
[2026-01-09 15:21:48] 2026-01-09 20:21:16,132 | INFO     | --------------------------------------------------
[2026-01-09 15:21:48] 2026-01-09 20:21:16,132 | INFO     | 
[2026-01-09 15:21:48] 2026-01-09 20:21:16,132 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 15:21:48] 2026-01-09 20:21:16,149 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,149 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,150 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,150 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,152 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:21:48] 2026-01-09 20:21:16,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,152 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:21:48] 2026-01-09 20:21:16,153 | INFO     | job 6963186889 has completed (purged errors)
[2026-01-09 15:21:48] 2026-01-09 20:21:16,153 | INFO     | overall cleanup function is called
[2026-01-09 15:21:48] 2026-01-09 20:21:17,162 | INFO     | --- collectZombieJob: --- 10, [25777]
[2026-01-09 15:21:48] 2026-01-09 20:21:17,162 | INFO     | zombie collector waiting for pid 25777
[2026-01-09 15:21:48] 2026-01-09 20:21:17,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:21:48] 2026-01-09 20:21:17,162 | INFO     | collected zombie processes
[2026-01-09 15:21:48] 2026-01-09 20:21:17,163 | INFO     | will attempt to kill all subprocesses of pid=25777
[2026-01-09 15:21:48] 2026-01-09 20:21:17,333 | INFO     | process IDs to be killed: [25777] (in reverse order)
[2026-01-09 15:21:48] 2026-01-09 20:21:17,392 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:21:48] 2026-01-09 20:21:17,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:21:48] 2026-01-09 20:21:17,398 | INFO     | did not find any defunct processes belonging to 25777
[2026-01-09 15:21:48] 2026-01-09 20:21:17,403 | INFO     | did not find any defunct processes belonging to 25777
[2026-01-09 15:21:48] 2026-01-09 20:21:17,403 | INFO     | ready for new job
[2026-01-09 15:21:48] 2026-01-09 20:21:17,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:21:48] 2026-01-09 20:21:17,405 | INFO     | ***************************************
[2026-01-09 15:21:48] 2026-01-09 20:21:17,405 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:21:48] 2026-01-09 20:21:17,406 | INFO     | ***************************************
[2026-01-09 15:21:48] 2026-01-09 20:21:17,406 | INFO     | 
[2026-01-09 15:21:48] 2026-01-09 20:21:17,407 | INFO     | architecture information:
[2026-01-09 15:21:48] 2026-01-09 20:21:17,407 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:21:48] 2026-01-09 20:21:17,422 | INFO     | cat /etc/os-release:
[2026-01-09 15:21:48] NAME="CentOS Linux"
[2026-01-09 15:21:48] VERSION="7 (Core)"
[2026-01-09 15:21:48] ID="centos"
[2026-01-09 15:21:48] ID_LIKE="rhel fedora"
[2026-01-09 15:21:48] VERSION_ID="7"
[2026-01-09 15:21:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:21:48] ANSI_COLOR="0;31"
[2026-01-09 15:21:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:21:48] HOME_URL="https://www.centos.org/"
[2026-01-09 15:21:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:21:48] 
[2026-01-09 15:21:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:21:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:21:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:21:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:21:48] 
[2026-01-09 15:21:48] 2026-01-09 20:21:17,423 | INFO     | ***************************************
[2026-01-09 15:21:48] 2026-01-09 20:21:17,926 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 15:21:48] 2026-01-09 20:21:17,940 | INFO     | sufficient remaining disk space (27252490240 B)
[2026-01-09 15:21:48] 2026-01-09 20:21:17,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:21:48] 2026-01-09 20:21:17,940 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:21:48] 2026-01-09 20:21:17,940 | INFO     | update_server=False
[2026-01-09 15:21:48] 2026-01-09 20:21:17,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:21:48] 2026-01-09 20:21:17,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:21:48] 2026-01-09 20:21:17,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:21:48] 2026-01-09 20:21:17,983 | INFO     | all payload control threads have been joined
[2026-01-09 15:21:48] 2026-01-09 20:21:18,468 | INFO     | all job control threads have been joined
[2026-01-09 15:21:48] 2026-01-09 20:21:18,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:21:48] 2026-01-09 20:21:18,513 | INFO     | aborting loop
[2026-01-09 15:21:48] 2026-01-09 20:21:18,533 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:21:48] 2026-01-09 20:21:18,945 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:18,946 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:18,964 | INFO     | all data control threads have been joined
[2026-01-09 15:21:48] 2026-01-09 20:21:18,982 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:18,988 | INFO     | [payload] control thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,123 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,137 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,473 | INFO     | [job] control thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,519 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,585 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,790 | INFO     | [job] validate thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,839 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,901 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,946 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:19,969 | INFO     | [data] control thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:20,389 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:21,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:21:48] 2026-01-09 20:21:25,330 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:21:48] 2026-01-09 20:21:27,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381833598784)>', '<ExcThread(monitor, started 140381249324800)>']
[2026-01-09 15:21:48] 2026-01-09 20:21:32,430 | INFO     | all workflow threads have been joined
[2026-01-09 15:21:48] 2026-01-09 20:21:32,430 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:21:48] 2026-01-09 20:21:32,430 | INFO     | traces error code: 0
[2026-01-09 15:21:48] 2026-01-09 20:21:32,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:21:48] 2026-01-09 20:21:48,419 | INFO     | PID=18995 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 15:21:48] 2026-01-09 20:21:48,420 | INFO     | .. there are 3 such processes running
[2026-01-09 15:21:48] 2026-01-09 20:21:48,420 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:21:48] 2026-01-09 20:21:48,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:21:48] 2026-01-09 20:21:48,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:21:48] 2026-01-09 20:21:48,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:21:48] 2026-01-09 20:21:48,421 | INFO     | [monitor] control thread has ended
[2026-01-09 15:21:48] 2026-01-09 20:21:48,550 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:21:48] 2026-01-09 20:21:48,552 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:21:48] 2026-01-09 20:21:48,555 [wrapper] pilotpid: 18995
[2026-01-09 15:21:48] 2026-01-09 20:21:48,557 [wrapper] Pilot exit status: 0
[2026-01-09 15:21:48] 2026-01-09 20:21:48,565 [wrapper] pandaids: 6963186889
[2026-01-09 15:21:48] 2026-01-09 20:21:48,591 [wrapper] cleanup supervisor_pilot 21645 18996
[2026-01-09 15:21:48] 2026-01-09 20:21:48,594 [wrapper] Test setup, not cleaning
[2026-01-09 15:21:48] 2026-01-09 20:21:48,596 [wrapper] apfmon messages muted
[2026-01-09 15:21:48] 2026-01-09 20:21:48,598 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:21:48] 2026-01-09 20:21:48,600 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:21:48]  *** Error codes and diagnostics ***
[2026-01-09 15:21:48]     "exeErrorCode": 0,
[2026-01-09 15:21:48]     "exeErrorDiag": "",
[2026-01-09 15:21:48]     "pilotErrorCode": 0,
[2026-01-09 15:21:48]     "pilotErrorDiag": "",
[2026-01-09 15:21:48]  *** Listing of results directory ***
[2026-01-09 15:21:48] total 444372
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 15:21:48] -rwx------ 1 boincer umatlas     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:01 queuedata.json
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas       100 Jan  9 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:21:48] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 10:48 run_atlas
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas       105 Jan  9 10:48 job.xml
[2026-01-09 15:21:48] -rw-r--r-- 2 boincer umatlas 225680012 Jan  9 10:48 EVNT.47898824._001410.pool.root.1
[2026-01-09 15:21:48] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:48 start_atlas.sh
[2026-01-09 15:21:48] drwxrwx--x 2 boincer umatlas      4096 Jan  9 10:48 shared
[2026-01-09 15:21:48] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 10:48 input.tar.gz
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas         0 Jan  9 10:48 boinc_lockfile
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 10:48 pandaJob.out
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas        57 Jan  9 10:48 setup.sh.local
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas    989377 Jan  9 10:48 agis_schedconf.cvmfs.json
[2026-01-09 15:21:48] drwx------ 5 boincer umatlas      4096 Jan  9 10:48 pilot3
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 15:18 init_data.xml
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas 219892024 Jan  9 15:20 HITS.47898826._036797.pool.root.1
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas       531 Jan  9 15:20 boinc_task_state.xml
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas      1054 Jan  9 15:21 memory_monitor_summary.json
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas   1516240 Jan  9 15:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas    507413 Jan  9 15:21 log.47898826._036797.job.log.tgz.1
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas      7861 Jan  9 15:21 heartbeat.json
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 15:21 boinc_mmap_file
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas        29 Jan  9 15:21 wrapper_checkpoint.txt
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas        95 Jan  9 15:21 pilot_heartbeat.json
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas       820 Jan  9 15:21 pilotlog.txt
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas   2272873 Jan  9 15:21 log.47898826._036797.job.log.1
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas       357 Jan  9 15:21 output.list
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas       620 Jan  9 15:21 runtime_log
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas   2795520 Jan  9 15:21 result.tar.gz
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 15:21 runtime_log.err
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas       663 Jan  9 15:21 L34MDmO0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjggKDmuyeQYm.diag
[2026-01-09 15:21:48] -rw-r--r-- 1 boincer umatlas     21084 Jan  9 15:21 stderr.txt
[2026-01-09 15:21:48] HITS file was successfully produced:
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas 219892024 Jan  9 15:20 shared/HITS.pool.root.1
[2026-01-09 15:21:48]  *** Contents of shared directory: ***
[2026-01-09 15:21:48] total 438464
[2026-01-09 15:21:48] -rw-r--r-- 2 boincer umatlas 225680012 Jan  9 10:48 ATLAS.root_0
[2026-01-09 15:21:48] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:48 start_atlas.sh
[2026-01-09 15:21:48] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 10:48 input.tar.gz
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas 219892024 Jan  9 15:20 HITS.pool.root.1
[2026-01-09 15:21:48] -rw------- 1 boincer umatlas   2795520 Jan  9 15:21 result.tar.gz
15:21:49 (15325): run_atlas exited; CPU time 123389.043008
15:21:49 (15325): called boinc_finish(0)

</stderr_txt>
]]>

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