Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:16:05 (19200): wrapper (7.7.26015): starting
19:16:05 (19200): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:16:05] Arguments: --nthreads 8
[2026-01-09 19:16:05] Threads: 8
[2026-01-09 19:16:05] Checking for CVMFS
[2026-01-09 19:16:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:16:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:16:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:16:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:16:06] 2.11.2.0 21704 35763 129560 154952 2 56 19628597 25165825 0 130560 0 17461370 99.810 11938646 3038 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 19:16:06] CVMFS is ok
[2026-01-09 19:16:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:16:06] Checking for apptainer binary...
[2026-01-09 19:16:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:16:06] Running /usr/bin/apptainer --version
[2026-01-09 19:16:06] apptainer version 1.3.2-1.el7
[2026-01-09 19:16:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:16:07] cg-vwn497.simple-grid.lan
[2026-01-09 19:16:07] apptainer works
[2026-01-09 19:16:07] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:16:07] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:16:07] Starting ATLAS job with PandaID=6963942649
[2026-01-09 19:16:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:49:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:49:46] 2026-01-09 20:48:39,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,145 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:49:46] 2026-01-09 20:48:41,146 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 21:49:46] 2026-01-09 20:48:41,148 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963942649/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,149 | INFO     | extracted standard info from prmon json
[2026-01-09 21:49:46] 2026-01-09 20:48:41,149 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:49:46] 2026-01-09 20:48:41,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:49:46] 2026-01-09 20:48:41,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:49:46] 2026-01-09 20:48:41,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:49:46] 2026-01-09 20:48:41,155 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:49:46] 2026-01-09 20:48:41,156 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 21:49:46] 2026-01-09 20:48:41,157 | INFO     | sum of deviations: -2280079472.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,157 | INFO     | mean x: 1767987162.5
[2026-01-09 21:49:46] 2026-01-09 20:48:41,157 | INFO     | mean y: 2492127.7866666666
[2026-01-09 21:49:46] 2026-01-09 20:48:41,157 | INFO     | intersect: 3854580067.0775905
[2026-01-09 21:49:46] 2026-01-09 20:48:41,158 | INFO     | chi2: 2.3634447087991215
[2026-01-09 21:49:46] 2026-01-09 20:48:41,158 | INFO     | sum of square deviations: 945282840.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,159 | INFO     | sum of deviations: 7625755789.999998
[2026-01-09 21:49:46] 2026-01-09 20:48:41,159 | INFO     | mean x: 1767987010.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,159 | INFO     | mean y: 2506652.331034483
[2026-01-09 21:49:46] 2026-01-09 20:48:41,159 | INFO     | intersect: -14260142163.077785
[2026-01-09 21:49:46] 2026-01-09 20:48:41,160 | INFO     | chi2: 1.6035580502794553
[2026-01-09 21:49:46] 2026-01-09 20:48:41,160 | INFO     | current chi2=1.6035580502794553 (change=32.15165794615811 %)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,160 | INFO     | sum of square deviations: 850825255.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,161 | INFO     | sum of deviations: 7454204483.5
[2026-01-09 21:49:46] 2026-01-09 20:48:41,161 | INFO     | mean x: 1767986857.5
[2026-01-09 21:49:46] 2026-01-09 20:48:41,161 | INFO     | mean y: 2506375.25
[2026-01-09 21:49:46] 2026-01-09 20:48:41,162 | INFO     | intersect: -15487085033.206224
[2026-01-09 21:49:46] 2026-01-09 20:48:41,162 | INFO     | chi2: 1.6052782979366773
[2026-01-09 21:49:46] 2026-01-09 20:48:41,162 | INFO     | current chi2=1.6052782979366773 (change=-0.1072769181584799 %)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,162 | INFO     | right removable region: 139
[2026-01-09 21:49:46] 2026-01-09 20:48:41,163 | INFO     | sum of square deviations: 945282840.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,163 | INFO     | sum of deviations: -24336609166.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,164 | INFO     | mean x: 1767987315.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,164 | INFO     | mean y: 2524830.4689655174
[2026-01-09 21:49:46] 2026-01-09 20:48:41,164 | INFO     | intersect: 45519923935.69416
[2026-01-09 21:49:46] 2026-01-09 20:48:41,164 | INFO     | chi2: 0.9200560534164643
[2026-01-09 21:49:46] 2026-01-09 20:48:41,164 | INFO     | current chi2=0.9200560534164643 (change=61.07139507046265 %)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,165 | INFO     | sum of square deviations: 850825255.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,166 | INFO     | sum of deviations: -24088987382.5
[2026-01-09 21:49:46] 2026-01-09 20:48:41,166 | INFO     | mean x: 1767987467.5
[2026-01-09 21:49:46] 2026-01-09 20:48:41,166 | INFO     | mean y: 2524342.2071428574
[2026-01-09 21:49:46] 2026-01-09 20:48:41,166 | INFO     | intersect: 50058664009.83564
[2026-01-09 21:49:46] 2026-01-09 20:48:41,166 | INFO     | chi2: 0.9012368781016358
[2026-01-09 21:49:46] 2026-01-09 20:48:41,167 | INFO     | current chi2=0.9012368781016358 (change=2.045437910543267 %)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,167 | INFO     | left removable region: 20
[2026-01-09 21:49:46] 2026-01-09 20:48:41,167 | INFO     | sum of square deviations: 522502820.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,168 | INFO     | sum of deviations: -4715097601.999997
[2026-01-09 21:49:46] 2026-01-09 20:48:41,168 | INFO     | mean x: 1767987437.0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,168 | INFO     | mean y: 2523604.781512605
[2026-01-09 21:49:46] 2026-01-09 20:48:41,168 | INFO     | intersect: 15956951036.512545
[2026-01-09 21:49:46] 2026-01-09 20:48:41,168 | INFO     | chi2: 0.06120011926080766
[2026-01-09 21:49:46] 2026-01-09 20:48:41,169 | INFO     | current memory leak: -9.02 B/s (using 119 data points, chi2=0.06)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,170 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,171 | INFO     | ..............................
[2026-01-09 21:49:46] 2026-01-09 20:48:41,171 | INFO     | . Timing measurements:
[2026-01-09 21:49:46] 2026-01-09 20:48:41,171 | INFO     | . get job = 0 s
[2026-01-09 21:49:46] 2026-01-09 20:48:41,171 | INFO     | . initial setup = 1 s
[2026-01-09 21:49:46] 2026-01-09 20:48:41,171 | INFO     | . payload setup = 7 s
[2026-01-09 21:49:46] 2026-01-09 20:48:41,171 | INFO     | . stage-in = 0 s
[2026-01-09 21:49:46] 2026-01-09 20:48:41,171 | INFO     | . payload execution = 9100 s
[2026-01-09 21:49:46] 2026-01-09 20:48:41,172 | INFO     | . stage-out = 0 s
[2026-01-09 21:49:46] 2026-01-09 20:48:41,172 | INFO     | . log creation = 0 s
[2026-01-09 21:49:46] 2026-01-09 20:48:41,172 | INFO     | ..............................
[2026-01-09 21:49:46] 2026-01-09 20:48:41,439 | INFO     | 
[2026-01-09 21:49:46] 2026-01-09 20:48:41,439 | INFO     | job summary report
[2026-01-09 21:49:46] 2026-01-09 20:48:41,439 | INFO     | --------------------------------------------------
[2026-01-09 21:49:46] 2026-01-09 20:48:41,439 | INFO     | PanDA job id: 6963942649
[2026-01-09 21:49:46] 2026-01-09 20:48:41,440 | INFO     | task id: 47898826
[2026-01-09 21:49:46] 2026-01-09 20:48:41,440 | INFO     | errors: (none)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,440 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:49:46] 2026-01-09 20:48:41,440 | INFO     | pilot state: finished 
[2026-01-09 21:49:46] 2026-01-09 20:48:41,440 | INFO     | transexitcode: 0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,440 | INFO     | exeerrorcode: 0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,440 | INFO     | exeerrordiag: 
[2026-01-09 21:49:46] 2026-01-09 20:48:41,440 | INFO     | exitcode: 0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | exitmsg: OK
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | cpuconsumptiontime: 68410 s
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | nevents: 400
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | neventsw: 0
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | pid: 29368
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | pgrp: 29368
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | corecount: 8
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | event service: False
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | sizes: {0: 2283922, 1: 2283922, 6: 2284212, 11: 2284240, 9111: 2312092, 9113: 2321276, 9120: 2321414}
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | --------------------------------------------------
[2026-01-09 21:49:46] 2026-01-09 20:48:41,441 | INFO     | 
[2026-01-09 21:49:46] 2026-01-09 20:48:41,442 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-09 21:49:46] 2026-01-09 20:48:41,468 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,468 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,468 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,469 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,470 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:49:46] 2026-01-09 20:48:41,471 | INFO     | job 6963942649 has completed (purged errors)
[2026-01-09 21:49:46] 2026-01-09 20:48:41,471 | INFO     | overall cleanup function is called
[2026-01-09 21:49:46] 2026-01-09 20:48:42,479 | INFO     | --- collectZombieJob: --- 10, [29368]
[2026-01-09 21:49:46] 2026-01-09 20:48:42,479 | INFO     | zombie collector waiting for pid 29368
[2026-01-09 21:49:46] 2026-01-09 20:48:42,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:49:46] 2026-01-09 20:48:42,479 | INFO     | collected zombie processes
[2026-01-09 21:49:46] 2026-01-09 20:48:42,480 | INFO     | will attempt to kill all subprocesses of pid=29368
[2026-01-09 21:49:46] 2026-01-09 20:48:42,539 | INFO     | process IDs to be killed: [29368] (in reverse order)
[2026-01-09 21:49:46] 2026-01-09 20:48:42,587 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:49:46] 2026-01-09 20:48:42,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:49:46] 2026-01-09 20:48:42,589 | INFO     | did not find any defunct processes belonging to 29368
[2026-01-09 21:49:46] 2026-01-09 20:48:42,590 | INFO     | did not find any defunct processes belonging to 29368
[2026-01-09 21:49:46] 2026-01-09 20:48:42,591 | INFO     | ready for new job
[2026-01-09 21:49:46] 2026-01-09 20:48:42,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:49:46] 2026-01-09 20:48:42,592 | INFO     | ***************************************
[2026-01-09 21:49:46] 2026-01-09 20:48:42,593 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:49:46] 2026-01-09 20:48:42,593 | INFO     | ***************************************
[2026-01-09 21:49:46] 2026-01-09 20:48:42,593 | INFO     | 
[2026-01-09 21:49:46] 2026-01-09 20:48:42,593 | INFO     | pilot is running in a VM
[2026-01-09 21:49:46] 2026-01-09 20:48:42,594 | INFO     | architecture information:
[2026-01-09 21:49:46] 2026-01-09 20:48:42,594 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:49:46] 2026-01-09 20:48:42,612 | INFO     | cat /etc/os-release:
[2026-01-09 21:49:46] NAME="CentOS Linux"
[2026-01-09 21:49:46] VERSION="7 (Core)"
[2026-01-09 21:49:46] ID="centos"
[2026-01-09 21:49:46] ID_LIKE="rhel fedora"
[2026-01-09 21:49:46] VERSION_ID="7"
[2026-01-09 21:49:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:49:46] ANSI_COLOR="0;31"
[2026-01-09 21:49:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:49:46] HOME_URL="https://www.centos.org/"
[2026-01-09 21:49:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:49:46] 
[2026-01-09 21:49:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:49:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:49:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:49:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:49:46] 
[2026-01-09 21:49:46] 2026-01-09 20:48:42,613 | INFO     | ***************************************
[2026-01-09 21:49:46] 2026-01-09 20:48:43,116 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-09 21:49:46] 2026-01-09 20:48:43,139 | INFO     | sufficient remaining disk space (498765660160 B)
[2026-01-09 21:49:46] 2026-01-09 20:48:43,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:49:46] 2026-01-09 20:48:43,140 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:49:46] 2026-01-09 20:48:43,140 | INFO     | update_server=False
[2026-01-09 21:49:46] 2026-01-09 20:48:43,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:49:46] 2026-01-09 20:48:43,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:49:46] 2026-01-09 20:48:43,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:49:46] 2026-01-09 20:48:43,252 | INFO     | all data control threads have been joined
[2026-01-09 21:49:46] 2026-01-09 20:48:43,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:49:46] 2026-01-09 20:48:43,442 | INFO     | aborting loop
[2026-01-09 21:49:46] 2026-01-09 20:48:44,085 | INFO     | all job control threads have been joined
[2026-01-09 21:49:46] 2026-01-09 20:48:44,145 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:44,147 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:44,257 | INFO     | [data] control thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:44,448 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:44,516 | INFO     | all payload control threads have been joined
[2026-01-09 21:49:46] 2026-01-09 20:48:44,720 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:44,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:49:46] 2026-01-09 20:48:44,980 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:45,084 | INFO     | [job] validate thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:45,091 | INFO     | [job] control thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:45,146 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:45,424 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:45,457 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:45,522 | INFO     | [payload] control thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:45,529 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:45,540 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:48,938 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:48:53,662 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:49:46] 2026-01-09 20:48:54,668 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:49:46] 2026-01-09 20:49:12,562 | INFO     | PID=22939 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 21:49:46] 2026-01-09 20:49:12,563 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:49:46] 2026-01-09 20:49:12,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:49:46] 2026-01-09 20:49:12,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:49:46] 2026-01-09 20:49:38,929 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:49:46] 2026-01-09 20:49:40,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802350659392)>', '<ExcThread(monitor, started 139801764284160)>']
[2026-01-09 21:49:46] 2026-01-09 20:49:41,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:49:46] 2026-01-09 20:49:41,709 | INFO     | [monitor] control thread has ended
[2026-01-09 21:49:46] 2026-01-09 20:49:45,926 | INFO     | all workflow threads have been joined
[2026-01-09 21:49:46] 2026-01-09 20:49:45,927 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:49:46] 2026-01-09 20:49:45,927 | INFO     | traces error code: 0
[2026-01-09 21:49:46] 2026-01-09 20:49:45,927 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:49:46] 2026-01-09 20:49:46,060 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:49:46] 2026-01-09 20:49:46,066 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:49:46] 2026-01-09 20:49:46,070 [wrapper] pilotpid: 22939
[2026-01-09 21:49:46] 2026-01-09 20:49:46,075 [wrapper] Pilot exit status: 0
[2026-01-09 21:49:46] 2026-01-09 20:49:46,092 [wrapper] pandaids: 6963942649
[2026-01-09 21:49:46] 2026-01-09 20:49:46,132 [wrapper] cleanup supervisor_pilot 13470 22940
[2026-01-09 21:49:46] 2026-01-09 20:49:46,137 [wrapper] Test setup, not cleaning
[2026-01-09 21:49:46] 2026-01-09 20:49:46,141 [wrapper] apfmon messages muted
[2026-01-09 21:49:46] 2026-01-09 20:49:46,144 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:49:46] 2026-01-09 20:49:46,148 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:49:46]  *** Error codes and diagnostics ***
[2026-01-09 21:49:46]     "exeErrorCode": 0,
[2026-01-09 21:49:46]     "exeErrorDiag": "",
[2026-01-09 21:49:46]     "pilotErrorCode": 0,
[2026-01-09 21:49:46]     "pilotErrorDiag": "",
[2026-01-09 21:49:46]  *** Listing of results directory ***
[2026-01-09 21:49:46] total 440884
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-09 21:49:46] -rwx------. 1 boinc boinc     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:16 queuedata.json
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc       100 Jan  9 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:49:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 19:16 run_atlas
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc       105 Jan  9 19:16 job.xml
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc      6390 Jan  9 19:16 init_data.xml
[2026-01-09 21:49:46] -rw-r--r--. 2 boinc boinc 222544241 Jan  9 19:16 EVNT.47898824._001169.pool.root.1
[2026-01-09 21:49:46] -rw-r--r--. 2 boinc boinc     15847 Jan  9 19:16 start_atlas.sh
[2026-01-09 21:49:46] drwxrwx--x. 2 boinc boinc        68 Jan  9 19:16 shared
[2026-01-09 21:49:46] -rw-r--r--. 2 boinc boinc    592402 Jan  9 19:16 input.tar.gz
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc         0 Jan  9 19:16 boinc_lockfile
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc      2520 Jan  9 19:16 pandaJob.out
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc    989372 Jan  9 19:16 agis_schedconf.cvmfs.json
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc   1516240 Jan  9 19:16 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:49:46] drwx------. 5 boinc boinc      4096 Jan  9 19:16 pilot3
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc 221787684 Jan  9 21:47 HITS.47898826._039879.pool.root.1
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc       530 Jan  9 21:48 boinc_task_state.xml
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc      1015 Jan  9 21:48 memory_monitor_summary.json
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc    387091 Jan  9 21:48 log.47898826._039879.job.log.tgz.1
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc      7765 Jan  9 21:48 heartbeat.json
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc        95 Jan  9 21:49 pilot_heartbeat.json
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc        27 Jan  9 21:49 wrapper_checkpoint.txt
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc      8192 Jan  9 21:49 boinc_mmap_file
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc      4882 Jan  9 21:49 pilotlog.txt
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc   1227990 Jan  9 21:49 log.47898826._039879.job.log.1
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc       357 Jan  9 21:49 output.list
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc       620 Jan  9 21:49 runtime_log
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc   1638400 Jan  9 21:49 result.tar.gz
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc      8832 Jan  9 21:49 runtime_log.err
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc       652 Jan  9 21:49 oZEMDm6sLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKVmKDmodyYUn.diag
[2026-01-09 21:49:46] -rw-r--r--. 1 boinc boinc     20707 Jan  9 21:49 stderr.txt
[2026-01-09 21:49:46] HITS file was successfully produced:
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc 221787684 Jan  9 21:47 shared/HITS.pool.root.1
[2026-01-09 21:49:46]  *** Contents of shared directory: ***
[2026-01-09 21:49:46] total 436120
[2026-01-09 21:49:46] -rw-r--r--. 2 boinc boinc 222544241 Jan  9 19:16 ATLAS.root_0
[2026-01-09 21:49:46] -rw-r--r--. 2 boinc boinc     15847 Jan  9 19:16 start_atlas.sh
[2026-01-09 21:49:46] -rw-r--r--. 2 boinc boinc    592402 Jan  9 19:16 input.tar.gz
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc 221787684 Jan  9 21:47 HITS.pool.root.1
[2026-01-09 21:49:46] -rw-------. 1 boinc boinc   1638400 Jan  9 21:49 result.tar.gz
21:49:47 (19200): run_atlas exited; CPU time 68465.860877
21:49:47 (19200): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN