Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:03:47 (3513725): wrapper (7.7.26015): starting
17:03:47 (3513725): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:03:47] Arguments: --nthreads 8
[2026-01-09 17:03:47] Threads: 8
[2026-01-09 17:03:47] Checking for CVMFS
[2026-01-09 17:03:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:03:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:03:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:03:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:03:49] 2.13.3.0 9943 21338 179680 154957 2 369 31712577 39288833 8871 16776704 0 10684346 99.579 13155177 38831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:03:49] CVMFS is ok
[2026-01-09 17:03:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:03:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:03:49] Further information can be found at the LHC@home message board.
[2026-01-09 17:03:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:03:49] Checking for apptainer binary...
[2026-01-09 17:03:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:03:49] Running /usr/bin/apptainer --version
[2026-01-09 17:03:49] apptainer version 1.4.5-2.el9
[2026-01-09 17:03:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:03:50] c-210-6.aglt2.org
[2026-01-09 17:03:50] apptainer works
[2026-01-09 17:03:50] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:03:50] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:03:50] Starting ATLAS job with PandaID=6963375891
[2026-01-09 17:03:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 21:25:07]  *** The last 200 lines of the pilot log: ***
[2026-01-11 21:25:07] 2026-01-12 02:24:11,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 21:25:07] 2026-01-12 02:24:11,818 | INFO     | time since job start (188367s) is within the limit (349056.0s)
[2026-01-11 21:25:07] 2026-01-12 02:24:12,513 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 21:25:07] 2026-01-12 02:24:12,571 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.173399999999
[2026-01-11 21:25:07] 2026-01-12 02:24:12,661 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963375891/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 21:25:07] 2026-01-12 02:24:12,662 | INFO     | extracted standard info from prmon json
[2026-01-11 21:25:07] 2026-01-12 02:24:12,662 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 21:25:07] 2026-01-12 02:24:12,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 21:25:07] 2026-01-12 02:24:13,368 | INFO     | fitting pss+swap vs Time
[2026-01-11 21:25:07] 2026-01-12 02:24:13,454 | INFO     | sum of square deviations: 9104174322365.828
[2026-01-11 21:25:07] 2026-01-12 02:24:13,639 | INFO     | monitor loop #10805: job 0:6963375891 is in state 'finished'
[2026-01-11 21:25:07] 2026-01-12 02:24:13,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 21:25:07] 2026-01-12 02:24:13,915 | INFO     | time since job start (188369s) is within the limit (349056.0s)
[2026-01-11 21:25:07] 2026-01-12 02:24:15,931 | INFO     | sum of deviations: 19906795806216.43
[2026-01-11 21:25:07] 2026-01-12 02:24:15,931 | INFO     | mean x: 1768090473.6158834
[2026-01-11 21:25:07] 2026-01-12 02:24:15,932 | INFO     | mean y: 2882633.0965964342
[2026-01-11 21:25:07] 2026-01-12 02:24:15,932 | INFO     | intersect: -3863147912.7729964
[2026-01-11 21:25:07] 2026-01-12 02:24:15,940 | INFO     | chi2: 28.244775045277517
[2026-01-11 21:25:07] 2026-01-12 02:24:15,947 | INFO     | sum of square deviations: 9059981311162.791
[2026-01-11 21:25:07] 2026-01-12 02:24:16,041 | INFO     | time since job start (188372s) is within the limit (349056.0s)
[2026-01-11 21:25:07] 2026-01-12 02:24:16,309 | INFO     | monitor loop #10806: job 0:6963375891 is in state 'finished'
[2026-01-11 21:25:07] 2026-01-12 02:24:16,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 21:25:07] 2026-01-12 02:24:17,641 | INFO     | sum of deviations: 21053994500285.8
[2026-01-11 21:25:07] 2026-01-12 02:24:17,642 | INFO     | mean x: 1768090321.119805
[2026-01-11 21:25:07] 2026-01-12 02:24:17,642 | INFO     | mean y: 2886591.40974026
[2026-01-11 21:25:07] 2026-01-12 02:24:17,642 | INFO     | intersect: -4105881696.1141653
[2026-01-11 21:25:07] 2026-01-12 02:24:17,650 | INFO     | chi2: 24.369005950762247
[2026-01-11 21:25:07] 2026-01-12 02:24:17,650 | INFO     | current chi2=24.369005950762247 (change=13.722074572384646 %)
[2026-01-11 21:25:07] 2026-01-12 02:24:17,650 | INFO     | right removable region: 3079
[2026-01-11 21:25:07] 2026-01-12 02:24:17,658 | INFO     | sum of square deviations: 9059976576521.549
[2026-01-11 21:25:07] 2026-01-12 02:24:18,183 | INFO     | time since job start (188374s) is within the limit (349056.0s)
[2026-01-11 21:25:07] 2026-01-12 02:24:18,183 | INFO     | 188378s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 21:25:07] 2026-01-12 02:24:19,104 | INFO     | monitor loop #10807: job 0:6963375891 is in state 'finished'
[2026-01-11 21:25:07] 2026-01-12 02:24:19,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 21:25:07] 2026-01-12 02:24:19,516 | INFO     | sum of deviations: 18728841881904.63
[2026-01-11 21:25:07] 2026-01-12 02:24:19,517 | INFO     | mean x: 1768090626.1201298
[2026-01-11 21:25:07] 2026-01-12 02:24:19,546 | INFO     | mean y: 2886697.274025974
[2026-01-11 21:25:07] 2026-01-12 02:24:19,546 | INFO     | intersect: -3652121623.0891414
[2026-01-11 21:25:07] 2026-01-12 02:24:19,579 | INFO     | chi2: 24.56558900175384
[2026-01-11 21:25:07] 2026-01-12 02:24:19,579 | INFO     | current chi2=24.56558900175384 (change=13.026076637628709 %)
[2026-01-11 21:25:07] 2026-01-12 02:24:19,579 | INFO     | left removable region: 10
[2026-01-11 21:25:07] 2026-01-12 02:24:19,610 | INFO     | sum of square deviations: 8963251197874.533
[2026-01-11 21:25:07] 2026-01-12 02:24:20,250 | INFO     | time since job start (188376s) is within the limit (349056.0s)
[2026-01-11 21:25:07] 2026-01-12 02:24:21,750 | INFO     | monitor loop #10808: job 0:6963375891 is in state 'finished'
[2026-01-11 21:25:07] 2026-01-12 02:24:21,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 21:25:07] 2026-01-12 02:24:22,346 | INFO     | time since job start (188378s) is within the limit (349056.0s)
[2026-01-11 21:25:07] 2026-01-12 02:24:22,408 | INFO     | sum of deviations: 19067336779817.785
[2026-01-11 21:25:07] 2026-01-12 02:24:22,408 | INFO     | mean x: 1768090595.6285436
[2026-01-11 21:25:07] 2026-01-12 02:24:22,408 | INFO     | mean y: 2894769.0586510263
[2026-01-11 21:25:07] 2026-01-12 02:24:22,409 | INFO     | intersect: -3758327370.076802
[2026-01-11 21:25:07] 2026-01-12 02:24:22,447 | INFO     | chi2: 17.628795936553136
[2026-01-11 21:25:07] 2026-01-12 02:24:22,447 | INFO     | current memory leak: 2.13 B/s (using 3069 data points, chi2=17.63)
[2026-01-11 21:25:07] 2026-01-12 02:24:22,496 | INFO     | could have reported an average CPU frequency of 2600 MHz (106 samples)
[2026-01-11 21:25:07] 2026-01-12 02:24:22,496 | INFO     | ..............................
[2026-01-11 21:25:07] 2026-01-12 02:24:22,496 | INFO     | . Timing measurements:
[2026-01-11 21:25:07] 2026-01-12 02:24:22,496 | INFO     | . get job = 0 s
[2026-01-11 21:25:07] 2026-01-12 02:24:22,497 | INFO     | . initial setup = 4 s
[2026-01-11 21:25:07] 2026-01-12 02:24:22,497 | INFO     | . payload setup = 38 s
[2026-01-11 21:25:07] 2026-01-12 02:24:22,497 | INFO     | . stage-in = 0 s
[2026-01-11 21:25:07] 2026-01-12 02:24:22,497 | INFO     | . payload execution = 188190 s
[2026-01-11 21:25:07] 2026-01-12 02:24:22,497 | INFO     | . stage-out = 22 s
[2026-01-11 21:25:07] 2026-01-12 02:24:22,497 | INFO     | . log creation = 8 s
[2026-01-11 21:25:07] 2026-01-12 02:24:22,497 | INFO     | ..............................
[2026-01-11 21:25:07] 2026-01-12 02:24:24,132 | INFO     | 
[2026-01-11 21:25:07] 2026-01-12 02:24:24,136 | INFO     | job summary report
[2026-01-11 21:25:07] 2026-01-12 02:24:24,136 | INFO     | --------------------------------------------------
[2026-01-11 21:25:07] 2026-01-12 02:24:24,136 | INFO     | PanDA job id: 6963375891
[2026-01-11 21:25:07] 2026-01-12 02:24:24,136 | INFO     | task id: 47962010
[2026-01-11 21:25:07] 2026-01-12 02:24:24,137 | INFO     | errors: (none)
[2026-01-11 21:25:07] 2026-01-12 02:24:24,137 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 21:25:07] 2026-01-12 02:24:24,137 | INFO     | pilot state: finished 
[2026-01-11 21:25:07] 2026-01-12 02:24:24,137 | INFO     | transexitcode: 0
[2026-01-11 21:25:07] 2026-01-12 02:24:24,137 | INFO     | exeerrorcode: 0
[2026-01-11 21:25:07] 2026-01-12 02:24:24,137 | INFO     | exeerrordiag: 
[2026-01-11 21:25:07] 2026-01-12 02:24:24,137 | INFO     | exitcode: 0
[2026-01-11 21:25:07] 2026-01-12 02:24:24,137 | INFO     | exitmsg: OK
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | cpuconsumptiontime: 315328 s
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | nevents: 900
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | neventsw: 0
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | pid: 3526191
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | pgrp: 3526191
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | corecount: 8
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | event service: False
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | sizes: {0: 2284451, 1: 2284650, 12: 2284650, 23: 2284678, 25: 2284968, 34: 2284996, 188235: 2394991, 188236: 2394990, 188260: 2404040, 188262: 2404096, 188323: 240
[2026-01-11 21:25:07] 2026-01-12 02:24:24,138 | INFO     | --------------------------------------------------
[2026-01-11 21:25:07] 2026-01-12 02:24:24,139 | INFO     | 
[2026-01-11 21:25:07] 2026-01-12 02:24:24,139 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 21:25:07] 2026-01-12 02:24:24,342 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,342 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,342 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,342 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,344 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 21:25:07] 2026-01-12 02:24:24,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,344 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 21:25:07] 2026-01-12 02:24:24,344 | INFO     | job 6963375891 has completed (purged errors)
[2026-01-11 21:25:07] 2026-01-12 02:24:24,345 | INFO     | overall cleanup function is called
[2026-01-11 21:25:07] 2026-01-12 02:24:25,475 | INFO     | --- collectZombieJob: --- 10, [3526191]
[2026-01-11 21:25:07] 2026-01-12 02:24:25,475 | INFO     | zombie collector waiting for pid 3526191
[2026-01-11 21:25:07] 2026-01-12 02:24:25,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 21:25:07] 2026-01-12 02:24:25,476 | INFO     | collected zombie processes
[2026-01-11 21:25:07] 2026-01-12 02:24:25,476 | INFO     | will attempt to kill all subprocesses of pid=3526191
[2026-01-11 21:25:07] 2026-01-12 02:24:28,827 | INFO     | process IDs to be killed: [3526191] (in reverse order)
[2026-01-11 21:25:07] 2026-01-12 02:24:30,592 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 21:25:07] 2026-01-12 02:24:30,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 21:25:07] 2026-01-12 02:24:30,715 | INFO     | did not find any defunct processes belonging to 3526191
[2026-01-11 21:25:07] 2026-01-12 02:24:30,843 | INFO     | did not find any defunct processes belonging to 3526191
[2026-01-11 21:25:07] 2026-01-12 02:24:30,843 | INFO     | ready for new job
[2026-01-11 21:25:07] 2026-01-12 02:24:30,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 21:25:07] 2026-01-12 02:24:30,999 | INFO     | ***************************************
[2026-01-11 21:25:07] 2026-01-12 02:24:30,999 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 21:25:07] 2026-01-12 02:24:30,999 | INFO     | ***************************************
[2026-01-11 21:25:07] 2026-01-12 02:24:30,999 | INFO     | 
[2026-01-11 21:25:07] 2026-01-12 02:24:31,001 | INFO     | architecture information:
[2026-01-11 21:25:07] 2026-01-12 02:24:31,086 | INFO     | executing command: cat /etc/os-release
[2026-01-11 21:25:07] 2026-01-12 02:24:31,229 | INFO     | cat /etc/os-release:
[2026-01-11 21:25:07] NAME="CentOS Linux"
[2026-01-11 21:25:07] VERSION="7 (Core)"
[2026-01-11 21:25:07] ID="centos"
[2026-01-11 21:25:07] ID_LIKE="rhel fedora"
[2026-01-11 21:25:07] VERSION_ID="7"
[2026-01-11 21:25:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 21:25:07] ANSI_COLOR="0;31"
[2026-01-11 21:25:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 21:25:07] HOME_URL="https://www.centos.org/"
[2026-01-11 21:25:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 21:25:07] 
[2026-01-11 21:25:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 21:25:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 21:25:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 21:25:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 21:25:07] 
[2026-01-11 21:25:07] 2026-01-12 02:24:31,230 | INFO     | ***************************************
[2026-01-11 21:25:07] 2026-01-12 02:24:31,733 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 21:25:07] 2026-01-12 02:24:32,006 | INFO     | sufficient remaining disk space (51546947584 B)
[2026-01-11 21:25:07] 2026-01-12 02:24:32,007 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 21:25:07] 2026-01-12 02:24:32,007 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 21:25:07] 2026-01-12 02:24:32,007 | INFO     | update_server=False
[2026-01-11 21:25:07] 2026-01-12 02:24:32,007 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 21:25:07] 2026-01-12 02:24:32,085 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 21:25:07] 2026-01-12 02:24:32,085 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 21:25:07] 2026-01-12 02:24:32,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 21:25:07] 2026-01-12 02:24:32,086 | INFO     | will abort loop
[2026-01-11 21:25:07] 2026-01-12 02:24:32,313 | INFO     | all job control threads have been joined
[2026-01-11 21:25:07] 2026-01-12 02:24:32,418 | INFO     | all payload control threads have been joined
[2026-01-11 21:25:07] 2026-01-12 02:24:32,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 21:25:07] 2026-01-12 02:24:32,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 21:25:07] 2026-01-12 02:24:32,908 | INFO     | all data control threads have been joined
[2026-01-11 21:25:07] 2026-01-12 02:24:33,013 | INFO     | [job] retrieve thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,092 | INFO     | [job] job monitor thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 21:25:07] 2026-01-12 02:24:33,319 | INFO     | [job] control thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,426 | INFO     | [payload] control thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,455 | INFO     | [payload] failed_post thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,496 | INFO     | [payload] validate_post thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,664 | INFO     | [job] validate thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,915 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,920 | INFO     | [data] copytool_in thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:33,924 | INFO     | [data] control thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:34,195 | INFO     | [job] queue monitor thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:34,266 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:34,467 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:34,585 | INFO     | [data] copytool_out thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:36,528 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 21:25:07] 2026-01-12 02:24:39,391 | INFO     | [monitor] cgroup control has ended
[2026-01-11 21:25:07] 2026-01-12 02:24:40,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110870525760)>', '<ExcThread(monitor, started 140110423127808)>']
[2026-01-11 21:25:07] 2026-01-12 02:24:45,085 | INFO     | all workflow threads have been joined
[2026-01-11 21:25:07] 2026-01-12 02:24:45,085 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 21:25:07] 2026-01-12 02:24:45,086 | INFO     | traces error code: 0
[2026-01-11 21:25:07] 2026-01-12 02:24:45,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 21:25:07] 2026-01-12 02:25:02,487 | INFO     | PID=3517543 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 21:25:07] 2026-01-12 02:25:02,594 | INFO     | .. there are 13 such processes running
[2026-01-11 21:25:07] 2026-01-12 02:25:02,601 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 21:25:07] 2026-01-12 02:25:02,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 21:25:07] 2026-01-12 02:25:02,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 21:25:07] 2026-01-12 02:25:02,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 21:25:07] 2026-01-12 02:25:02,602 | INFO     | [monitor] control thread has ended
[2026-01-11 21:25:07] 2026-01-12 02:25:04,527 [wrapper] ==== pilot stdout END ====
[2026-01-11 21:25:07] 2026-01-12 02:25:04,551 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 21:25:07] 2026-01-12 02:25:04,600 [wrapper] pilotpid: 3517543
[2026-01-11 21:25:07] 2026-01-12 02:25:04,650 [wrapper] Pilot exit status: 0
[2026-01-11 21:25:07] 2026-01-12 02:25:04,892 [wrapper] pandaids: 6963375891
[2026-01-11 21:25:07] 2026-01-12 02:25:06,076 [wrapper] cleanup supervisor_pilot 1818664 3517544
[2026-01-11 21:25:07] 2026-01-12 02:25:06,124 [wrapper] Test setup, not cleaning
[2026-01-11 21:25:07] 2026-01-12 02:25:06,151 [wrapper] apfmon messages muted
[2026-01-11 21:25:07] 2026-01-12 02:25:06,184 [wrapper] ==== wrapper stdout END ====
[2026-01-11 21:25:07] 2026-01-12 02:25:06,203 [wrapper] ==== wrapper stderr END ====
[2026-01-11 21:25:07]  *** Error codes and diagnostics ***
[2026-01-11 21:25:07]     "exeErrorCode": 0,
[2026-01-11 21:25:07]     "exeErrorDiag": "",
[2026-01-11 21:25:07]     "pilotErrorCode": 0,
[2026-01-11 21:25:07]     "pilotErrorDiag": "",
[2026-01-11 21:25:07]  *** Listing of results directory ***
[2026-01-11 21:25:07] total 1209876
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-11 21:25:07] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:16 queuedata.json
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 21:25:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:03 run_atlas
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:03 job.xml
[2026-01-11 21:25:07] -rw-r--r--. 2 boincer umatlas 393450499 Jan  9 17:03 EVNT.47962006._000083.pool.root.1
[2026-01-11 21:25:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:03 start_atlas.sh
[2026-01-11 21:25:07] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:03 shared
[2026-01-11 21:25:07] -rw-r--r--. 2 boincer umatlas    592605 Jan  9 17:03 input.tar.gz
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:03 boinc_lockfile
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 17:03 pandaJob.out
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas        57 Jan  9 17:03 setup.sh.local
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas    989398 Jan  9 17:04 agis_schedconf.cvmfs.json
[2026-01-11 21:25:07] drwx------. 5 boincer umatlas      4096 Jan  9 17:04 pilot3
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas       534 Jan 11 20:25 boinc_task_state.xml
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas 788048163 Jan 11 21:19 HITS.47962010._001052.pool.root.1
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas      1067 Jan 11 21:22 memory_monitor_summary.json
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas      6662 Jan 11 21:22 init_data.xml
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas   1516240 Jan 11 21:23 agis_ddmendpoints.agis.ALL.json
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas   3592152 Jan 11 21:23 log.47962010._001052.job.log.tgz.1
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas      8644 Jan 11 21:24 heartbeat.json
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas        95 Jan 11 21:25 pilot_heartbeat.json
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas       823 Jan 11 21:25 pilotlog.txt
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 21:25 boinc_mmap_file
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas        30 Jan 11 21:25 wrapper_checkpoint.txt
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas  23155533 Jan 11 21:25 log.47962010._001052.job.log.1
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas       353 Jan 11 21:25 output.list
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas       620 Jan 11 21:25 runtime_log
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas  26767360 Jan 11 21:25 result.tar.gz
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas      9339 Jan 11 21:25 runtime_log.err
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas       666 Jan 11 21:25 LB6KDm6sLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfJhKDmRRhowm.diag
[2026-01-11 21:25:07] -rw-r--r--. 1 boincer umatlas     21671 Jan 11 21:25 stderr.txt
[2026-01-11 21:25:07] HITS file was successfully produced:
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas 788048163 Jan 11 21:19 shared/HITS.pool.root.1
[2026-01-11 21:25:07]  *** Contents of shared directory: ***
[2026-01-11 21:25:07] total 1180556
[2026-01-11 21:25:07] -rw-r--r--. 2 boincer umatlas 393450499 Jan  9 17:03 ATLAS.root_0
[2026-01-11 21:25:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:03 start_atlas.sh
[2026-01-11 21:25:07] -rw-r--r--. 2 boincer umatlas    592605 Jan  9 17:03 input.tar.gz
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas 788048163 Jan 11 21:19 HITS.pool.root.1
[2026-01-11 21:25:07] -rw-------. 1 boincer umatlas  26767360 Jan 11 21:25 result.tar.gz
21:25:09 (3513725): run_atlas exited; CPU time 319171.954848
21:25:09 (3513725): called boinc_finish(0)

</stderr_txt>
]]>

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