Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:02:53 (2700341): wrapper (7.7.26015): starting
03:02:53 (2700341): wrapper: running run_atlas (--nthreads 6)
[2026-01-10 03:02:53] Arguments: --nthreads 6
[2026-01-10 03:02:53] Threads: 6
[2026-01-10 03:02:53] Checking for CVMFS
[2026-01-10 03:02:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 03:02:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 03:02:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 03:02:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 03:02:54] 2.13.3.0 2126625 765 64668 154951 3 99 46950462 52428801 1017 130560 0 1819208 99.997 26152 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 03:02:54] CVMFS is ok
[2026-01-10 03:02:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 03:02:54] Checking for apptainer binary...
[2026-01-10 03:02:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 03:02:54] Running /usr/bin/apptainer --version
[2026-01-10 03:02:54] apptainer version 1.4.4-1.el9
[2026-01-10 03:02:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 03:02:54] testio008
[2026-01-10 03:02:54] apptainer works
[2026-01-10 03:02:54] Set ATHENA_PROC_NUMBER=6
[2026-01-10 03:02:54] Set ATHENA_CORE_NUMBER=6
[2026-01-10 03:02:54] Starting ATLAS job with PandaID=6963375827
[2026-01-10 03:02:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:34:51]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:34:51] 2026-01-10 01:33:46,116 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6963375827/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,116 | INFO     | extracted standard info from prmon json
[2026-01-10 10:34:51] 2026-01-10 01:33:46,116 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:34:51] 2026-01-10 01:33:46,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:34:51] 2026-01-10 01:33:46,120 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:34:51] 2026-01-10 01:33:46,120 | INFO     | sum of square deviations: 26957982662.0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,122 | INFO     | sum of deviations: 415457797465.0002
[2026-01-10 10:34:51] 2026-01-10 01:33:46,122 | INFO     | mean x: 1767995280.0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,122 | INFO     | mean y: 2611818.7787810382
[2026-01-10 10:34:51] 2026-01-10 01:33:46,122 | INFO     | intersect: -27244509531.763035
[2026-01-10 10:34:51] 2026-01-10 01:33:46,122 | INFO     | chi2: 7.522965821060332
[2026-01-10 10:34:51] 2026-01-10 01:33:46,122 | INFO     | sum of square deviations: 26055444809.5
[2026-01-10 10:34:51] 2026-01-10 01:33:46,124 | INFO     | sum of deviations: 545714797297.99994
[2026-01-10 10:34:51] 2026-01-10 01:33:46,124 | INFO     | mean x: 1767995127.5
[2026-01-10 10:34:51] 2026-01-10 01:33:46,124 | INFO     | mean y: 2633822.100456621
[2026-01-10 10:34:51] 2026-01-10 01:33:46,124 | INFO     | intersect: -37026904905.08847
[2026-01-10 10:34:51] 2026-01-10 01:33:46,125 | INFO     | chi2: 4.553264730149668
[2026-01-10 10:34:51] 2026-01-10 01:33:46,125 | INFO     | current chi2=4.553264730149668 (change=39.47513735337024 %)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,125 | INFO     | sum of square deviations: 25173279432.0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,127 | INFO     | sum of deviations: 572302715652.0001
[2026-01-10 10:34:51] 2026-01-10 01:33:46,127 | INFO     | mean x: 1767994975.0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,127 | INFO     | mean y: 2638397.374133949
[2026-01-10 10:34:51] 2026-01-10 01:33:46,127 | INFO     | intersect: -40191899155.22479
[2026-01-10 10:34:51] 2026-01-10 01:33:46,127 | INFO     | chi2: 4.25211653046343
[2026-01-10 10:34:51] 2026-01-10 01:33:46,127 | INFO     | current chi2=4.25211653046343 (change=6.613896128028113 %)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,127 | INFO     | right removable region: 432
[2026-01-10 10:34:51] 2026-01-10 01:33:46,127 | INFO     | sum of square deviations: 26055444809.5
[2026-01-10 10:34:51] 2026-01-10 01:33:46,129 | INFO     | sum of deviations: 284040697191.99994
[2026-01-10 10:34:51] 2026-01-10 01:33:46,129 | INFO     | mean x: 1767995432.5
[2026-01-10 10:34:51] 2026-01-10 01:33:46,129 | INFO     | mean y: 2634005.4337899545
[2026-01-10 10:34:51] 2026-01-10 01:33:46,129 | INFO     | intersect: -19270982658.998363
[2026-01-10 10:34:51] 2026-01-10 01:33:46,130 | INFO     | chi2: 4.747671483259085
[2026-01-10 10:34:51] 2026-01-10 01:33:46,130 | INFO     | current chi2=4.747671483259085 (change=36.89096034481359 %)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,130 | INFO     | sum of square deviations: 25173279432.0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,132 | INFO     | sum of deviations: 194623224321.00006
[2026-01-10 10:34:51] 2026-01-10 01:33:46,132 | INFO     | mean x: 1767995585.0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,132 | INFO     | mean y: 2649433.870669746
[2026-01-10 10:34:51] 2026-01-10 01:33:46,132 | INFO     | intersect: -13666328510.281708
[2026-01-10 10:34:51] 2026-01-10 01:33:46,132 | INFO     | chi2: 3.4452052389704235
[2026-01-10 10:34:51] 2026-01-10 01:33:46,132 | INFO     | current chi2=3.4452052389704235 (change=27.433790414550142 %)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,132 | INFO     | sum of square deviations: 24311253967.0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,134 | INFO     | sum of deviations: 171749273307.5001
[2026-01-10 10:34:51] 2026-01-10 01:33:46,134 | INFO     | mean x: 1767995737.5
[2026-01-10 10:34:51] 2026-01-10 01:33:46,134 | INFO     | mean y: 2653479.3341121497
[2026-01-10 10:34:51] 2026-01-10 01:33:46,134 | INFO     | intersect: -12487528373.83392
[2026-01-10 10:34:51] 2026-01-10 01:33:46,134 | INFO     | chi2: 3.4094093597923347
[2026-01-10 10:34:51] 2026-01-10 01:33:46,134 | INFO     | current chi2=3.4094093597923347 (change=1.039005710695661 %)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,134 | INFO     | left removable region: 30
[2026-01-10 10:34:51] 2026-01-10 01:33:46,135 | INFO     | sum of square deviations: 20144379560.5
[2026-01-10 10:34:51] 2026-01-10 01:33:46,136 | INFO     | sum of deviations: 275059390374.0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,136 | INFO     | mean x: 1767995859.5
[2026-01-10 10:34:51] 2026-01-10 01:33:46,136 | INFO     | mean y: 2691863.7412935323
[2026-01-10 10:34:51] 2026-01-10 01:33:46,136 | INFO     | intersect: -24138228527.3435
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | chi2: 0.07398783499627114
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | current memory leak: 13.65 B/s (using 402 data points, chi2=0.07)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | could have reported an average CPU frequency of 3745 MHz (18 samples)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | ..............................
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | . Timing measurements:
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | . get job = 0 s
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | . initial setup = 3 s
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | . payload setup = 2 s
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | . stage-in = 0 s
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | . payload execution = 26980 s
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | . stage-out = 3 s
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | . log creation = 0 s
[2026-01-10 10:34:51] 2026-01-10 01:33:46,137 | INFO     | ..............................
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | 
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | job summary report
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | --------------------------------------------------
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | PanDA job id: 6963375827
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | task id: 47962010
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | errors: (none)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | pilot state: finished 
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | transexitcode: 0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | exeerrorcode: 0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | exeerrordiag: 
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | exitcode: 0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | exitmsg: OK
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | cpuconsumptiontime: 154178 s
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | nevents: 900
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | neventsw: 0
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | pid: 2716895
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | pgrp: 2716895
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | corecount: 6
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | event service: False
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | sizes: {0: 2284618, 2: 2284880, 10: 2284908, 26987: 2322365, 26990: 2331415, 27033: 2331605}
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | --------------------------------------------------
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | 
[2026-01-10 10:34:51] 2026-01-10 01:33:46,178 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | job 6963375827 has completed (purged errors)
[2026-01-10 10:34:51] 2026-01-10 01:33:46,186 | INFO     | overall cleanup function is called
[2026-01-10 10:34:51] 2026-01-10 01:33:47,196 | INFO     | --- collectZombieJob: --- 10, [2716895]
[2026-01-10 10:34:51] 2026-01-10 01:33:47,196 | INFO     | zombie collector waiting for pid 2716895
[2026-01-10 10:34:51] 2026-01-10 01:33:47,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:34:51] 2026-01-10 01:33:47,196 | INFO     | collected zombie processes
[2026-01-10 10:34:51] 2026-01-10 01:33:47,196 | INFO     | will attempt to kill all subprocesses of pid=2716895
[2026-01-10 10:34:51] 2026-01-10 01:33:47,232 | INFO     | process IDs to be killed: [2716895] (in reverse order)
[2026-01-10 10:34:51] 2026-01-10 01:33:47,250 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:34:51] 2026-01-10 01:33:47,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:34:51] 2026-01-10 01:33:47,252 | INFO     | did not find any defunct processes belonging to 2716895
[2026-01-10 10:34:51] 2026-01-10 01:33:47,253 | INFO     | did not find any defunct processes belonging to 2716895
[2026-01-10 10:34:51] 2026-01-10 01:33:47,253 | INFO     | ready for new job
[2026-01-10 10:34:51] 2026-01-10 01:33:47,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:34:51] 2026-01-10 01:33:47,255 | INFO     | ***************************************
[2026-01-10 10:34:51] 2026-01-10 01:33:47,255 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:34:51] 2026-01-10 01:33:47,255 | INFO     | ***************************************
[2026-01-10 10:34:51] 2026-01-10 01:33:47,255 | INFO     | 
[2026-01-10 10:34:51] 2026-01-10 01:33:47,255 | INFO     | architecture information:
[2026-01-10 10:34:51] 2026-01-10 01:33:47,256 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:34:51] 2026-01-10 01:33:47,262 | INFO     | cat /etc/os-release:
[2026-01-10 10:34:51] NAME="CentOS Linux"
[2026-01-10 10:34:51] VERSION="7 (Core)"
[2026-01-10 10:34:51] ID="centos"
[2026-01-10 10:34:51] ID_LIKE="rhel fedora"
[2026-01-10 10:34:51] VERSION_ID="7"
[2026-01-10 10:34:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:34:51] ANSI_COLOR="0;31"
[2026-01-10 10:34:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:34:51] HOME_URL="https://www.centos.org/"
[2026-01-10 10:34:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:34:51] 
[2026-01-10 10:34:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:34:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:34:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:34:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:34:51] 
[2026-01-10 10:34:51] 2026-01-10 01:33:47,262 | INFO     | ***************************************
[2026-01-10 10:34:51] 2026-01-10 01:33:47,764 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-10 10:34:51] 2026-01-10 01:33:47,771 | INFO     | sufficient remaining disk space (277768830976 B)
[2026-01-10 10:34:51] 2026-01-10 01:33:47,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:34:51] 2026-01-10 01:33:47,771 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:34:51] 2026-01-10 01:33:47,771 | INFO     | update_server=False
[2026-01-10 10:34:51] 2026-01-10 01:33:47,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:34:51] 2026-01-10 01:33:47,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:34:51] 2026-01-10 01:33:47,771 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 10:34:51] 2026-01-10 01:33:47,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:34:51] 2026-01-10 01:33:47,772 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:34:51] 2026-01-10 01:33:47,772 | INFO     | aborting loop
[2026-01-10 10:34:51] 2026-01-10 01:33:47,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:34:51] 2026-01-10 01:33:47,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:34:51] 2026-01-10 01:33:48,528 | INFO     | all job control threads have been joined
[2026-01-10 10:34:51] 2026-01-10 01:33:48,559 | INFO     | all data control threads have been joined
[2026-01-10 10:34:51] 2026-01-10 01:33:48,607 | INFO     | all payload control threads have been joined
[2026-01-10 10:34:51] 2026-01-10 01:33:48,776 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:48,776 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:48,776 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,010 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,057 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:34:51] 2026-01-10 01:33:49,484 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,533 | INFO     | [job] control thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,546 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,564 | INFO     | [data] control thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,612 | INFO     | [payload] control thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,876 | INFO     | [job] validate thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:49,966 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:50,103 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:50,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:34:51] 2026-01-10 01:33:50,262 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:51,089 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:33:54,119 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:34:51] 2026-01-10 01:34:45,686 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:34:51] 2026-01-10 01:34:46,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555499689792)>', '<ExcThread(monitor, started 140555128391424)>']
[2026-01-10 10:34:51] 2026-01-10 01:34:47,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:34:51] 2026-01-10 01:34:47,053 | INFO     | [monitor] control thread has ended
[2026-01-10 10:34:51] 2026-01-10 01:34:51,754 | INFO     | all workflow threads have been joined
[2026-01-10 10:34:51] 2026-01-10 01:34:51,754 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:34:51] 2026-01-10 01:34:51,754 | INFO     | traces error code: 0
[2026-01-10 10:34:51] 2026-01-10 01:34:51,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:34:51] 2026-01-10 01:34:51,804 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:34:51] 2026-01-10 01:34:51,805 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:34:51] 2026-01-10 01:34:51,806 [wrapper] pilotpid: 2704199
[2026-01-10 10:34:51] 2026-01-10 01:34:51,806 [wrapper] Pilot exit status: 0
[2026-01-10 10:34:51] 2026-01-10 01:34:51,809 [wrapper] pandaids: 6963375827
[2026-01-10 10:34:51] 2026-01-10 01:34:51,820 [wrapper] cleanup supervisor_pilot 2934352 2704200
[2026-01-10 10:34:51] 2026-01-10 01:34:51,821 [wrapper] Test setup, not cleaning
[2026-01-10 10:34:51] 2026-01-10 01:34:51,822 [wrapper] apfmon messages muted
[2026-01-10 10:34:51] 2026-01-10 01:34:51,823 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:34:51] 2026-01-10 01:34:51,824 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:34:51]  *** Error codes and diagnostics ***
[2026-01-10 10:34:51]     "exeErrorCode": 0,
[2026-01-10 10:34:51]     "exeErrorDiag": "",
[2026-01-10 10:34:51]     "pilotErrorCode": 0,
[2026-01-10 10:34:51]     "pilotErrorDiag": "",
[2026-01-10 10:34:51]  *** Listing of results directory ***
[2026-01-10 10:34:51] total 1175824
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc    579449 Jan  9 16:13 pilot3.tar.gz
[2026-01-10 10:34:51] -rwx------. 1 boinc boinc     36322 Jan  9 16:14 runpilot2-wrapper.sh
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc      5112 Jan  9 16:16 queuedata.json
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc       100 Jan 10 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:34:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 03:02 run_atlas
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc       105 Jan 10 03:02 job.xml
[2026-01-10 10:34:51] -rw-r--r--. 2 boinc boinc 390344352 Jan 10 03:02 EVNT.47962006._000079.pool.root.1
[2026-01-10 10:34:51] -rw-r--r--. 2 boinc boinc     15847 Jan 10 03:02 start_atlas.sh
[2026-01-10 10:34:51] drwxrwx--x. 2 boinc boinc        68 Jan 10 03:02 shared
[2026-01-10 10:34:51] -rw-r--r--. 2 boinc boinc    592608 Jan 10 03:02 input.tar.gz
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc         0 Jan 10 03:02 boinc_lockfile
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc      2890 Jan 10 03:02 pandaJob.out
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc    989356 Jan 10 03:02 agis_schedconf.cvmfs.json
[2026-01-10 10:34:51] drwx------. 5 boinc boinc      4096 Jan 10 03:03 pilot3
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc      9531 Jan 10 03:32 init_data.xml
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc       533 Jan 10 10:23 boinc_task_state.xml
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc 799182380 Jan 10 10:32 HITS.47962010._001000.pool.root.1
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc        95 Jan 10 10:32 pilot_heartbeat.json
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc      1031 Jan 10 10:32 memory_monitor_summary.json
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc   1516240 Jan 10 10:33 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc   1481268 Jan 10 10:33 log.47962010._001000.job.log.tgz.1
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc      8591 Jan 10 10:33 heartbeat.json
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc      8192 Jan 10 10:34 boinc_mmap_file
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc        29 Jan 10 10:34 wrapper_checkpoint.txt
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc      4553 Jan 10 10:34 pilotlog.txt
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc   3824770 Jan 10 10:34 log.47962010._001000.job.log.1
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc       353 Jan 10 10:34 output.list
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc       620 Jan 10 10:34 runtime_log
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc   5324800 Jan 10 10:34 result.tar.gz
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc       650 Jan 10 10:34 V47NDm5sLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNJhKDmPTlQAo.diag
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc      8776 Jan 10 10:34 runtime_log.err
[2026-01-10 10:34:51] -rw-r--r--. 1 boinc boinc     20566 Jan 10 10:34 stderr.txt
[2026-01-10 10:34:51] HITS file was successfully produced:
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc 799182380 Jan 10 10:32 shared/HITS.pool.root.1
[2026-01-10 10:34:51]  *** Contents of shared directory: ***
[2026-01-10 10:34:51] total 1167444
[2026-01-10 10:34:51] -rw-r--r--. 2 boinc boinc 390344352 Jan 10 03:02 ATLAS.root_0
[2026-01-10 10:34:51] -rw-r--r--. 2 boinc boinc     15847 Jan 10 03:02 start_atlas.sh
[2026-01-10 10:34:51] -rw-r--r--. 2 boinc boinc    592608 Jan 10 03:02 input.tar.gz
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc 799182380 Jan 10 10:32 HITS.pool.root.1
[2026-01-10 10:34:51] -rw-------. 1 boinc boinc   5324800 Jan 10 10:34 result.tar.gz
10:34:53 (2700341): run_atlas exited; CPU time 154284.229598
10:34:53 (2700341): called boinc_finish(0)

</stderr_txt>
]]>

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