Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:31:06 (1834516): wrapper (7.7.26015): starting
12:31:06 (1834516): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:31:06] Arguments: --nthreads 8
[2026-01-09 12:31:06] Threads: 8
[2026-01-09 12:31:06] Checking for CVMFS
[2026-01-09 12:31:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:31:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:31:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:31:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:31:08] 2.13.3.0 11771 93667 242876 154951 1 581 24338270 32935936 30731 16776704 0 562329691 99.506 734601311 37728 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 12:31:08] CVMFS is ok
[2026-01-09 12:31:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:31:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:31:08] Further information can be found at the LHC@home message board.
[2026-01-09 12:31:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:31:08] Checking for apptainer binary...
[2026-01-09 12:31:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:31:08] Running /usr/bin/apptainer --version
[2026-01-09 12:31:08] apptainer version 1.4.5-2.el9
[2026-01-09 12:31:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:31:08] c7-2-14.aglt2.org
[2026-01-09 12:31:08] apptainer works
[2026-01-09 12:31:08] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:31:08] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:31:08] Starting ATLAS job with PandaID=6963383835
[2026-01-09 12:31:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:41:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:41:49] 2026-01-10 22:40:42,443 | INFO     | chi2: 13.859186487034929
[2026-01-10 17:41:49] 2026-01-10 22:40:42,445 | INFO     | sum of square deviations: 1561429136997.2349
[2026-01-10 17:41:49] 2026-01-10 22:40:42,494 | INFO     | sum of deviations: 11314255793743.578
[2026-01-10 17:41:49] 2026-01-10 22:40:42,494 | INFO     | mean x: 1768032254.444574
[2026-01-10 17:41:49] 2026-01-10 22:40:42,494 | INFO     | mean y: 2830089.9270711783
[2026-01-10 17:41:49] 2026-01-10 22:40:42,494 | INFO     | intersect: -12808490452.511654
[2026-01-10 17:41:49] 2026-01-10 22:40:42,495 | INFO     | chi2: 12.039551671330019
[2026-01-10 17:41:49] 2026-01-10 22:40:42,495 | INFO     | current chi2=12.039551671330019 (change=13.129448957246897 %)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,495 | INFO     | right removable region: 1713
[2026-01-10 17:41:49] 2026-01-10 22:40:42,496 | INFO     | sum of square deviations: 1561428149407.2344
[2026-01-10 17:41:49] 2026-01-10 22:40:42,512 | INFO     | PID=1839321 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 17:41:49] 2026-01-10 22:40:42,526 | INFO     | sum of deviations: 10241220072073.63
[2026-01-10 17:41:49] 2026-01-10 22:40:42,526 | INFO     | .. there are 24 such processes running
[2026-01-10 17:41:49] 2026-01-10 22:40:42,528 | INFO     | mean x: 1768032559.444574
[2026-01-10 17:41:49] 2026-01-10 22:40:42,528 | INFO     | mean y: 2833167.1330221705
[2026-01-10 17:41:49] 2026-01-10 22:40:42,529 | INFO     | intersect: -11593480465.8301
[2026-01-10 17:41:49] 2026-01-10 22:40:42,529 | INFO     | chi2: 9.663886473149164
[2026-01-10 17:41:49] 2026-01-10 22:40:42,529 | INFO     | current chi2=9.663886473149164 (change=30.270896620161714 %)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,530 | INFO     | sum of square deviations: 1547803055965.2617
[2026-01-10 17:41:49] 2026-01-10 22:40:42,559 | INFO     | sum of deviations: 9661445662089.877
[2026-01-10 17:41:49] 2026-01-10 22:40:42,559 | INFO     | mean x: 1768032711.9473376
[2026-01-10 17:41:49] 2026-01-10 22:40:42,559 | INFO     | mean y: 2839656.5430076066
[2026-01-10 17:41:49] 2026-01-10 22:40:42,559 | INFO     | intersect: -11033287911.136368
[2026-01-10 17:41:49] 2026-01-10 22:40:42,560 | INFO     | chi2: 6.727100088824777
[2026-01-10 17:41:49] 2026-01-10 22:40:42,560 | INFO     | current chi2=6.727100088824777 (change=30.38928895206049 %)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,561 | INFO     | sum of square deviations: 1534257452385.7595
[2026-01-10 17:41:49] 2026-01-10 22:40:42,609 | INFO     | sum of deviations: 9065340002075.045
[2026-01-10 17:41:49] 2026-01-10 22:40:42,609 | INFO     | mean x: 1768032864.4501173
[2026-01-10 17:41:49] 2026-01-10 22:40:42,609 | INFO     | mean y: 2846367.0768779344
[2026-01-10 17:41:49] 2026-01-10 22:40:42,609 | INFO     | intersect: -10443783060.181128
[2026-01-10 17:41:49] 2026-01-10 22:40:42,610 | INFO     | chi2: 3.6320888201065564
[2026-01-10 17:41:49] 2026-01-10 22:40:42,611 | INFO     | current chi2=3.6320888201065564 (change=46.008104946434926 %)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,612 | INFO     | sum of square deviations: 1520791106106.2332
[2026-01-10 17:41:49] 2026-01-10 22:40:42,654 | INFO     | sum of deviations: 8656728132841.183
[2026-01-10 17:41:49] 2026-01-10 22:40:42,654 | INFO     | mean x: 1768033016.9529135
[2026-01-10 17:41:49] 2026-01-10 22:40:42,654 | INFO     | mean y: 2850993.8022366096
[2026-01-10 17:41:49] 2026-01-10 22:40:42,654 | INFO     | intersect: -10061240712.28065
[2026-01-10 17:41:49] 2026-01-10 22:40:42,655 | INFO     | chi2: 2.365275998827283
[2026-01-10 17:41:49] 2026-01-10 22:40:42,655 | INFO     | current chi2=2.365275998827283 (change=34.87835468853177 %)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,656 | INFO     | sum of square deviations: 1507403888204.0918
[2026-01-10 17:41:49] 2026-01-10 22:40:42,685 | INFO     | sum of deviations: 8446249163087.397
[2026-01-10 17:41:49] 2026-01-10 22:40:42,685 | INFO     | mean x: 1768033169.4551358
[2026-01-10 17:41:49] 2026-01-10 22:40:42,685 | INFO     | mean y: 2853389.603896104
[2026-01-10 17:41:49] 2026-01-10 22:40:42,685 | INFO     | intersect: -9903747485.369663
[2026-01-10 17:41:49] 2026-01-10 22:40:42,686 | INFO     | chi2: 2.020744120713326
[2026-01-10 17:41:49] 2026-01-10 22:40:42,686 | INFO     | current chi2=2.020744120713326 (change=14.566244205106626 %)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,686 | INFO     | left removable region: 50
[2026-01-10 17:41:49] 2026-01-10 22:40:42,687 | INFO     | sum of square deviations: 1426154663107.975
[2026-01-10 17:41:49] 2026-01-10 22:40:42,717 | INFO     | sum of deviations: 8363336607429.925
[2026-01-10 17:41:49] 2026-01-10 22:40:42,717 | INFO     | mean x: 1768033748.9651232
[2026-01-10 17:41:49] 2026-01-10 22:40:42,717 | INFO     | mean y: 2863942.9813589896
[2026-01-10 17:41:49] 2026-01-10 22:40:42,718 | INFO     | intersect: -10365339280.971552
[2026-01-10 17:41:49] 2026-01-10 22:40:42,719 | INFO     | chi2: 0.08591512769314835
[2026-01-10 17:41:49] 2026-01-10 22:40:42,719 | INFO     | current memory leak: 5.86 B/s (using 1663 data points, chi2=0.09)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,720 | INFO     | could have reported an average CPU frequency of 3209 MHz (61 samples)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,720 | INFO     | ..............................
[2026-01-10 17:41:49] 2026-01-10 22:40:42,720 | INFO     | . Timing measurements:
[2026-01-10 17:41:49] 2026-01-10 22:40:42,720 | INFO     | . get job = 1 s
[2026-01-10 17:41:49] 2026-01-10 22:40:42,720 | INFO     | . initial setup = 5 s
[2026-01-10 17:41:49] 2026-01-10 22:40:42,720 | INFO     | . payload setup = 33 s
[2026-01-10 17:41:49] 2026-01-10 22:40:42,720 | INFO     | . stage-in = 0 s
[2026-01-10 17:41:49] 2026-01-10 22:40:42,720 | INFO     | . payload execution = 104845 s
[2026-01-10 17:41:49] 2026-01-10 22:40:42,721 | INFO     | . stage-out = 2 s
[2026-01-10 17:41:49] 2026-01-10 22:40:42,721 | INFO     | . log creation = 0 s
[2026-01-10 17:41:49] 2026-01-10 22:40:42,721 | INFO     | ..............................
[2026-01-10 17:41:49] 2026-01-10 22:40:42,973 | INFO     | 
[2026-01-10 17:41:49] 2026-01-10 22:40:42,973 | INFO     | job summary report
[2026-01-10 17:41:49] 2026-01-10 22:40:42,973 | INFO     | --------------------------------------------------
[2026-01-10 17:41:49] 2026-01-10 22:40:42,973 | INFO     | PanDA job id: 6963383835
[2026-01-10 17:41:49] 2026-01-10 22:40:42,973 | INFO     | task id: 47962010
[2026-01-10 17:41:49] 2026-01-10 22:40:42,973 | INFO     | errors: (none)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | pilot state: finished 
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | transexitcode: 0
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | exeerrorcode: 0
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | exeerrordiag: 
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | exitcode: 0
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | exitmsg: OK
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | cpuconsumptiontime: 205840 s
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | nevents: 900
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | neventsw: 0
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | pid: 1852423
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | pgrp: 1852423
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | corecount: 8
[2026-01-10 17:41:49] 2026-01-10 22:40:42,974 | INFO     | event service: False
[2026-01-10 17:41:49] 2026-01-10 22:40:42,975 | INFO     | sizes: {0: 2284397, 1: 2284652, 2: 2284680, 13: 2284680, 16: 2284998, 24: 2285026, 104881: 2359729, 104885: 2368723, 104887: 2368779, 104891: 2369025}
[2026-01-10 17:41:49] 2026-01-10 22:40:42,975 | INFO     | --------------------------------------------------
[2026-01-10 17:41:49] 2026-01-10 22:40:42,975 | INFO     | 
[2026-01-10 17:41:49] 2026-01-10 22:40:42,975 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:41:49] 2026-01-10 22:40:42,998 | INFO     | job 6963383835 has completed (purged errors)
[2026-01-10 17:41:49] 2026-01-10 22:40:42,999 | INFO     | overall cleanup function is called
[2026-01-10 17:41:49] 2026-01-10 22:40:44,014 | INFO     | --- collectZombieJob: --- 10, [1852423]
[2026-01-10 17:41:49] 2026-01-10 22:40:44,014 | INFO     | zombie collector waiting for pid 1852423
[2026-01-10 17:41:49] 2026-01-10 22:40:44,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:41:49] 2026-01-10 22:40:44,015 | INFO     | collected zombie processes
[2026-01-10 17:41:49] 2026-01-10 22:40:44,015 | INFO     | will attempt to kill all subprocesses of pid=1852423
[2026-01-10 17:41:49] 2026-01-10 22:40:44,427 | INFO     | process IDs to be killed: [1852423] (in reverse order)
[2026-01-10 17:41:49] 2026-01-10 22:40:44,538 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:41:49] 2026-01-10 22:40:44,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:41:49] 2026-01-10 22:40:44,559 | INFO     | did not find any defunct processes belonging to 1852423
[2026-01-10 17:41:49] 2026-01-10 22:40:44,577 | INFO     | did not find any defunct processes belonging to 1852423
[2026-01-10 17:41:49] 2026-01-10 22:40:44,578 | INFO     | ready for new job
[2026-01-10 17:41:49] 2026-01-10 22:40:44,578 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:41:49] 2026-01-10 22:40:44,584 | INFO     | ***************************************
[2026-01-10 17:41:49] 2026-01-10 22:40:44,584 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:41:49] 2026-01-10 22:40:44,585 | INFO     | ***************************************
[2026-01-10 17:41:49] 2026-01-10 22:40:44,585 | INFO     | 
[2026-01-10 17:41:49] 2026-01-10 22:40:44,589 | INFO     | architecture information:
[2026-01-10 17:41:49] 2026-01-10 22:40:44,590 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:41:49] 2026-01-10 22:40:44,608 | INFO     | cat /etc/os-release:
[2026-01-10 17:41:49] NAME="CentOS Linux"
[2026-01-10 17:41:49] VERSION="7 (Core)"
[2026-01-10 17:41:49] ID="centos"
[2026-01-10 17:41:49] ID_LIKE="rhel fedora"
[2026-01-10 17:41:49] VERSION_ID="7"
[2026-01-10 17:41:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:41:49] ANSI_COLOR="0;31"
[2026-01-10 17:41:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:41:49] HOME_URL="https://www.centos.org/"
[2026-01-10 17:41:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:41:49] 
[2026-01-10 17:41:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:41:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:41:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:41:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:41:49] 
[2026-01-10 17:41:49] 2026-01-10 22:40:44,608 | INFO     | ***************************************
[2026-01-10 17:41:49] 2026-01-10 22:40:45,114 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 17:41:49] 2026-01-10 22:40:45,134 | INFO     | sufficient remaining disk space (75601281024 B)
[2026-01-10 17:41:49] 2026-01-10 22:40:45,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:41:49] 2026-01-10 22:40:45,135 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:41:49] 2026-01-10 22:40:45,135 | INFO     | update_server=False
[2026-01-10 17:41:49] 2026-01-10 22:40:45,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:41:49] 2026-01-10 22:40:45,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:41:49] 2026-01-10 22:40:45,308 | INFO     | all payload control threads have been joined
[2026-01-10 17:41:49] 2026-01-10 22:40:45,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:41:49] 2026-01-10 22:40:45,341 | INFO     | aborting loop
[2026-01-10 17:41:49] 2026-01-10 22:40:45,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:41:49] 2026-01-10 22:40:46,034 | INFO     | all data control threads have been joined
[2026-01-10 17:41:49] 2026-01-10 22:40:46,135 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:46,184 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:46,296 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:46,300 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:46,313 | INFO     | [payload] control thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:46,316 | INFO     | all job control threads have been joined
[2026-01-10 17:41:49] 2026-01-10 22:40:46,346 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:46,471 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:46,601 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:47,039 | INFO     | [data] control thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:47,175 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:47,298 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:47,322 | INFO     | [job] control thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:47,545 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:47,599 | INFO     | [job] validate thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:47,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:41:49] 2026-01-10 22:40:48,795 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:40:49,141 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:41:49] 2026-01-10 22:41:15,115 | INFO     | PID=1839321 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:41:49] 2026-01-10 22:41:15,116 | INFO     | .. there are 24 such processes running
[2026-01-10 17:41:49] 2026-01-10 22:41:15,116 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:41:49] 2026-01-10 22:41:15,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:41:49] 2026-01-10 22:41:15,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:41:49] 2026-01-10 22:41:42,873 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:41:49] 2026-01-10 22:41:44,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628695344960)>', '<ExcThread(monitor, started 139627969111808)>']
[2026-01-10 17:41:49] 2026-01-10 22:41:45,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:41:49] 2026-01-10 22:41:45,263 | INFO     | [monitor] control thread has ended
[2026-01-10 17:41:49] 2026-01-10 22:41:49,424 | INFO     | all workflow threads have been joined
[2026-01-10 17:41:49] 2026-01-10 22:41:49,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:41:49] 2026-01-10 22:41:49,424 | INFO     | traces error code: 0
[2026-01-10 17:41:49] 2026-01-10 22:41:49,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:41:49] 2026-01-10 22:41:49,576 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:41:49] 2026-01-10 22:41:49,578 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:41:49] 2026-01-10 22:41:49,580 [wrapper] pilotpid: 1839321
[2026-01-10 17:41:49] 2026-01-10 22:41:49,582 [wrapper] Pilot exit status: 0
[2026-01-10 17:41:49] 2026-01-10 22:41:49,591 [wrapper] pandaids: 6963383835
[2026-01-10 17:41:49] 2026-01-10 22:41:49,666 [wrapper] cleanup supervisor_pilot 1573385 1839322
[2026-01-10 17:41:49] 2026-01-10 22:41:49,669 [wrapper] Test setup, not cleaning
[2026-01-10 17:41:49] 2026-01-10 22:41:49,671 [wrapper] apfmon messages muted
[2026-01-10 17:41:49] 2026-01-10 22:41:49,673 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:41:49] 2026-01-10 22:41:49,675 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:41:49]  *** Error codes and diagnostics ***
[2026-01-10 17:41:49]     "exeErrorCode": 0,
[2026-01-10 17:41:49]     "exeErrorDiag": "",
[2026-01-10 17:41:49]     "pilotErrorCode": 0,
[2026-01-10 17:41:49]     "pilotErrorDiag": "",
[2026-01-10 17:41:49]  *** Listing of results directory ***
[2026-01-10 17:41:49] total 1205248
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 17:41:49] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas       100 Jan  9 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:41:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 12:31 run_atlas
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas       105 Jan  9 12:31 job.xml
[2026-01-10 17:41:49] -rw-r--r--. 2 boincer umatlas 393833595 Jan  9 12:31 EVNT.47962006._000128.pool.root.1
[2026-01-10 17:41:49] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:31 start_atlas.sh
[2026-01-10 17:41:49] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 12:31 shared
[2026-01-10 17:41:49] -rw-r--r--. 2 boincer umatlas    592608 Jan  9 12:31 input.tar.gz
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas         0 Jan  9 12:31 boinc_lockfile
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas      2893 Jan  9 12:31 pandaJob.out
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas        57 Jan  9 12:31 setup.sh.local
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas    989356 Jan  9 12:31 agis_schedconf.cvmfs.json
[2026-01-10 17:41:49] drwx------. 5 boincer umatlas      4096 Jan  9 12:31 pilot3
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas       532 Jan 10 17:34 boinc_task_state.xml
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas      6946 Jan 10 17:39 init_data.xml
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas 803153166 Jan 10 17:40 HITS.47962010._001823.pool.root.1
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas        95 Jan 10 17:40 pilot_heartbeat.json
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas      1070 Jan 10 17:40 memory_monitor_summary.json
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas   1516240 Jan 10 17:40 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas   2696367 Jan 10 17:40 log.47962010._001823.job.log.tgz.1
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas      8620 Jan 10 17:40 heartbeat.json
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 17:41 boinc_mmap_file
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas        29 Jan 10 17:41 wrapper_checkpoint.txt
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas      4824 Jan 10 17:41 pilotlog.txt
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas  13937734 Jan 10 17:41 log.47962010._001823.job.log.1
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas       353 Jan 10 17:41 output.list
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas       620 Jan 10 17:41 runtime_log
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas  16650240 Jan 10 17:41 result.tar.gz
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 17:41 runtime_log.err
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas       668 Jan 10 17:41 9KSNDmTsLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnTmKDmV8hNAo.diag
[2026-01-10 17:41:49] -rw-r--r--. 1 boincer umatlas     21180 Jan 10 17:41 stderr.txt
[2026-01-10 17:41:49] HITS file was successfully produced:
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas 803153166 Jan 10 17:40 shared/HITS.pool.root.1
[2026-01-10 17:41:49]  *** Contents of shared directory: ***
[2026-01-10 17:41:49] total 1185800
[2026-01-10 17:41:49] -rw-r--r--. 2 boincer umatlas 393833595 Jan  9 12:31 ATLAS.root_0
[2026-01-10 17:41:49] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 12:31 start_atlas.sh
[2026-01-10 17:41:49] -rw-r--r--. 2 boincer umatlas    592608 Jan  9 12:31 input.tar.gz
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas 803153166 Jan 10 17:40 HITS.pool.root.1
[2026-01-10 17:41:49] -rw-------. 1 boincer umatlas  16650240 Jan 10 17:41 result.tar.gz
17:41:51 (1834516): run_atlas exited; CPU time 207649.091886
17:41:51 (1834516): called boinc_finish(0)

</stderr_txt>
]]>

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