Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:38:40 (3963487): wrapper (7.7.26015): starting
07:38:40 (3963487): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:38:40] Arguments: --nthreads 8
[2026-01-09 07:38:40] Threads: 8
[2026-01-09 07:38:40] Checking for CVMFS
[2026-01-09 07:38:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:38:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:38:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:38:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:38:40] 2.11.3.0 1904511 56875 146368 154948 0 420 36556984 45568000 12509 130560 0 249527221 99.740 189181427 20438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-09 07:38:40] CVMFS is ok
[2026-01-09 07:38:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:38:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:38:40] Further information can be found at the LHC@home message board.
[2026-01-09 07:38:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:38:40] Checking for apptainer binary...
[2026-01-09 07:38:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:38:40] Running /usr/bin/apptainer --version
[2026-01-09 07:38:40] apptainer version 1.4.1-1.el9
[2026-01-09 07:38:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:38:40] wns0020.triumf.lcg
[2026-01-09 07:38:40] apptainer works
[2026-01-09 07:38:40] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:38:40] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:38:40] Starting ATLAS job with PandaID=6963381476
[2026-01-09 07:38:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:43:08]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:43:08] 2026-01-09 15:42:35,277 | WARNING  | wrong length of table data, x=[1767973161.0, 1767973222.0], y=[1882.0, 256313.0] (must be same and length>=4)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | ..............................
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . Timing measurements:
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . get job = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . initial setup = 3 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . payload setup = 6 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . stage-in = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . payload execution = 71 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . stage-out = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . log creation = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | ..............................
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381476/pilotlog.txt
[2026-01-09 07:43:08] 2026-01-09 15:42:35,288 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 07:43:08] - Log from pilotlog.txt -
[2026-01-09 07:43:08] 2026-01-09 15:42:35,275 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963381476/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | INFO     | extracted standard info from prmon json
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:43:08] 2026-01-09 15:42:35,277 | WARNING  | wrong length of table data, x=[1767973161.0, 1767973222.0], y=[1882.0, 256313.0] (must be same and length>=4)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | ..............................
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . Timing measurements:
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . get job = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . initial setup = 3 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . payload setup = 6 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . stage-in = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . payload execution = 71 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . stage-out = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . log creation = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | ..............................
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381476/pilotlog.txt
[2026-01-09 07:43:08] 2026-01-09 15:42:35,288 | WARNING  | 
[2026-01-09 07:43:08] [begin log extracts]
[2026-01-09 07:43:08] - Log from pilotlog.txt -
[2026-01-09 07:43:08] 2026-01-09 15:42:35,275 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963381476/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | INFO     | extracted standard info from prmon json
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:43:08] 2026-01-09 15:42:35,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:43:08] 2026-01-09 15:42:35,277 | WARNING  | wrong length of table data, x=[1767973161.0, 1767973222.0], y=[1882.0, 256313.0] (must be same and length>=4)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | ..............................
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . Timing measurements:
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . get job = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . initial setup = 3 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . payload setup = 6 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . stage-in = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . payload execution = 71 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . stage-out = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,278 | INFO     | . log creation = 0 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | ..............................
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 07:43:08] 2026-01-09 15:42:35,279 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963381476/pilotlog.txt
[2026-01-09 07:43:08] [end log extracts]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,289 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,289 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 07:43:08] 2026-01-09 15:42:35,358 | INFO     | 
[2026-01-09 07:43:08] 2026-01-09 15:42:35,358 | INFO     | job summary report
[2026-01-09 07:43:08] 2026-01-09 15:42:35,358 | INFO     | --------------------------------------------------
[2026-01-09 07:43:08] 2026-01-09 15:42:35,358 | INFO     | PanDA job id: 6963381476
[2026-01-09 07:43:08] 2026-01-09 15:42:35,358 | INFO     | task id: 47962010
[2026-01-09 07:43:08] 2026-01-09 15:42:35,358 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 07:40:22,010 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | pilot state: failed 
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | transexitcode: 65
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | exeerrorcode: 65
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | exitcode: 65
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | cpuconsumptiontime: 47 s
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | nevents: 0
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | neventsw: 0
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | pid: 3973714
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | pgrp: 3973714
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | corecount: 8
[2026-01-09 07:43:08] 2026-01-09 15:42:35,359 | INFO     | event service: False
[2026-01-09 07:43:08] 2026-01-09 15:42:35,360 | INFO     | sizes: {0: 2284619, 5: 2284881, 11: 2284937, 81: 2310368, 82: 2314658, 85: 2314714, 207: 2315008}
[2026-01-09 07:43:08] 2026-01-09 15:42:35,360 | INFO     | --------------------------------------------------
[2026-01-09 07:43:08] 2026-01-09 15:42:35,360 | INFO     | 
[2026-01-09 07:43:08] 2026-01-09 15:42:35,360 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 07:43:08] 2026-01-09 15:42:35,373 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,375 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,375 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:43:08] 2026-01-09 15:42:35,375 | INFO     | job 6963381476 has completed (purged errors)
[2026-01-09 07:43:08] 2026-01-09 15:42:35,375 | INFO     | overall cleanup function is called
[2026-01-09 07:43:08] 2026-01-09 15:42:36,143 | INFO     | PID=3967130 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:43:08] 2026-01-09 15:42:36,143 | INFO     | .. there are 26 such processes running
[2026-01-09 07:43:08] 2026-01-09 15:42:36,381 | INFO     | --- collectZombieJob: --- 10, [3973714]
[2026-01-09 07:43:08] 2026-01-09 15:42:36,381 | INFO     | zombie collector waiting for pid 3973714
[2026-01-09 07:43:08] 2026-01-09 15:42:36,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:43:08] 2026-01-09 15:42:36,381 | INFO     | collected zombie processes
[2026-01-09 07:43:08] 2026-01-09 15:42:36,381 | INFO     | will attempt to kill all subprocesses of pid=3973714
[2026-01-09 07:43:08] 2026-01-09 15:42:36,574 | INFO     | process IDs to be killed: [3973714] (in reverse order)
[2026-01-09 07:43:08] 2026-01-09 15:42:36,710 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:43:08] 2026-01-09 15:42:36,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:43:08] 2026-01-09 15:42:36,797 | INFO     | did not find any defunct processes belonging to 3973714
[2026-01-09 07:43:08] 2026-01-09 15:42:36,857 | INFO     | did not find any defunct processes belonging to 3973714
[2026-01-09 07:43:08] 2026-01-09 15:42:36,857 | INFO     | ready for new job
[2026-01-09 07:43:08] 2026-01-09 15:42:36,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:43:08] 2026-01-09 15:42:36,859 | INFO     | ***************************************
[2026-01-09 07:43:08] 2026-01-09 15:42:36,859 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:43:08] 2026-01-09 15:42:36,859 | INFO     | ***************************************
[2026-01-09 07:43:08] 2026-01-09 15:42:36,859 | INFO     | 
[2026-01-09 07:43:08] 2026-01-09 15:42:36,881 | INFO     | architecture information:
[2026-01-09 07:43:08] 2026-01-09 15:42:36,893 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:43:08] 2026-01-09 15:42:36,969 | INFO     | cat /etc/os-release:
[2026-01-09 07:43:08] NAME="CentOS Linux"
[2026-01-09 07:43:08] VERSION="7 (Core)"
[2026-01-09 07:43:08] ID="centos"
[2026-01-09 07:43:08] ID_LIKE="rhel fedora"
[2026-01-09 07:43:08] VERSION_ID="7"
[2026-01-09 07:43:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:43:08] ANSI_COLOR="0;31"
[2026-01-09 07:43:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:43:08] HOME_URL="https://www.centos.org/"
[2026-01-09 07:43:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:43:08] 
[2026-01-09 07:43:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:43:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:43:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:43:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:43:08] 
[2026-01-09 07:43:08] 2026-01-09 15:42:36,969 | INFO     | ***************************************
[2026-01-09 07:43:08] 2026-01-09 15:42:37,476 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 07:43:08] 2026-01-09 15:42:37,487 | INFO     | sufficient remaining disk space (1113596100608 B)
[2026-01-09 07:43:08] 2026-01-09 15:42:37,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:43:08] 2026-01-09 15:42:37,488 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:43:08] 2026-01-09 15:42:37,488 | INFO     | update_server=False
[2026-01-09 07:43:08] 2026-01-09 15:42:37,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:43:08] 2026-01-09 15:42:37,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:43:08] 2026-01-09 15:42:37,999 | INFO     | aborting loop
[2026-01-09 07:43:08] 2026-01-09 15:42:38,093 | INFO     | all data control threads have been joined
[2026-01-09 07:43:08] 2026-01-09 15:42:38,494 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:38,707 | INFO     | all job control threads have been joined
[2026-01-09 07:43:08] 2026-01-09 15:42:38,725 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:38,835 | INFO     | [job] validate thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:38,888 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:38,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:43:08] 2026-01-09 15:42:38,951 | INFO     | all payload control threads have been joined
[2026-01-09 07:43:08] 2026-01-09 15:42:38,994 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:39,005 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:39,064 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:39,099 | INFO     | [data] control thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:39,167 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:39,539 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:39,713 | INFO     | [job] control thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:39,751 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:39,955 | INFO     | [payload] control thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:40,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:43:08] 2026-01-09 15:42:40,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:43:08] 2026-01-09 15:42:40,938 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:41,376 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:44,578 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:43:08] 2026-01-09 15:42:51,396 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:43:08] 2026-01-09 15:42:52,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715063408448)>', '<ExcThread(monitor, started 139714531153664)>']
[2026-01-09 07:43:08] 2026-01-09 15:42:57,487 | INFO     | all workflow threads have been joined
[2026-01-09 07:43:08] 2026-01-09 15:42:57,487 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:43:08] 2026-01-09 15:42:57,487 | INFO     | traces error code: 0
[2026-01-09 07:43:08] 2026-01-09 15:42:57,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:43:08] 2026-01-09 15:43:08,691 | INFO     | PID=3967130 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:43:08] 2026-01-09 15:43:08,691 | INFO     | .. there are 26 such processes running
[2026-01-09 07:43:08] 2026-01-09 15:43:08,692 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:43:08] 2026-01-09 15:43:08,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:43:08] 2026-01-09 15:43:08,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:43:08] 2026-01-09 15:43:08,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:43:08] 2026-01-09 15:43:08,692 | INFO     | [monitor] control thread has ended
[2026-01-09 07:43:08] 2026-01-09 15:43:08,788 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:43:08] 2026-01-09 15:43:08,791 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:43:08] 2026-01-09 15:43:08,793 [wrapper] pilotpid: 3967130
[2026-01-09 07:43:08] 2026-01-09 15:43:08,796 [wrapper] Pilot exit status: 0
[2026-01-09 07:43:08] 2026-01-09 15:43:08,804 [wrapper] pandaids: 6963381476
[2026-01-09 07:43:08] 2026-01-09 15:43:08,841 [wrapper] cleanup supervisor_pilot 3967136 3967131
[2026-01-09 07:43:08] 2026-01-09 15:43:08,844 [wrapper] Test setup, not cleaning
[2026-01-09 07:43:08] 2026-01-09 15:43:08,846 [wrapper] apfmon messages muted
[2026-01-09 07:43:08] 2026-01-09 15:43:08,848 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:43:08] 2026-01-09 15:43:08,850 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:43:08]  *** Error codes and diagnostics ***
[2026-01-09 07:43:08]     "exeErrorCode": 65,
[2026-01-09 07:43:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 07:43:08]     "pilotErrorCode": 1305,
[2026-01-09 07:43:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 07:43:08]  *** Listing of results directory ***
[2026-01-09 07:43:08] total 386108
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:13 pilot3.tar.gz
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:13 queuedata.json
[2026-01-09 07:43:08] -rwx------. 1 boinc boinc     36322 Jan  8 23:14 runpilot2-wrapper.sh
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:43:08] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:38 run_atlas
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:38 job.xml
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc      6445 Jan  9 07:38 init_data.xml
[2026-01-09 07:43:08] -rw-r--r--. 2 boinc boinc 391182854 Jan  9 07:38 EVNT.47962006._000032.pool.root.1
[2026-01-09 07:43:08] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:38 start_atlas.sh
[2026-01-09 07:43:08] drwxrwx--x. 2 boinc boinc      4096 Jan  9 07:38 shared
[2026-01-09 07:43:08] -rw-r--r--. 2 boinc boinc    592611 Jan  9 07:38 input.tar.gz
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:38 boinc_lockfile
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc      2892 Jan  9 07:38 pandaJob.out
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc    989377 Jan  9 07:38 agis_schedconf.cvmfs.json
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc   1516240 Jan  9 07:38 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:43:08] drwx------. 5 boinc boinc      4096 Jan  9 07:38 pilot3
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc       523 Jan  9 07:39 boinc_task_state.xml
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc       989 Jan  9 07:40 memory_monitor_summary.json
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc     48222 Jan  9 07:40 log.47962010._001592.job.log.tgz.1
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc     10321 Jan  9 07:42 heartbeat.json
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc      8192 Jan  9 07:43 boinc_mmap_file
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc        23 Jan  9 07:43 wrapper_checkpoint.txt
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc       823 Jan  9 07:43 pilotlog.txt
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc        95 Jan  9 07:43 pilot_heartbeat.json
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc     92905 Jan  9 07:43 log.47962010._001592.job.log.1
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc       186 Jan  9 07:43 output.list
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc       620 Jan  9 07:43 runtime_log
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc    163840 Jan  9 07:43 result.tar.gz
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc      8634 Jan  9 07:43 runtime_log.err
[2026-01-09 07:43:08] -rw-------. 1 boinc boinc       644 Jan  9 07:43 6lVNDmTsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrIhKDmAYJGkm.diag
[2026-01-09 07:43:08] -rw-r--r--. 1 boinc boinc     22458 Jan  9 07:43 stderr.txt
[2026-01-09 07:43:08] No HITS result produced
[2026-01-09 07:43:08]  *** Contents of shared directory: ***
[2026-01-09 07:43:09] total 382776
[2026-01-09 07:43:09] -rw-r--r--. 2 boinc boinc 391182854 Jan  9 07:38 ATLAS.root_0
[2026-01-09 07:43:09] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:38 start_atlas.sh
[2026-01-09 07:43:09] -rw-r--r--. 2 boinc boinc    592611 Jan  9 07:38 input.tar.gz
[2026-01-09 07:43:09] -rw-------. 1 boinc boinc    163840 Jan  9 07:43 result.tar.gz
07:43:10 (3963487): run_atlas exited; CPU time 48.104011
07:43:10 (3963487): called boinc_finish(0)

</stderr_txt>
]]>

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