Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:35 (32200): wrapper (7.7.26015): starting
10:57:35 (32200): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 10:57:35] Arguments: --nthreads 12
[2026-01-09 10:57:35] Threads: 12
[2026-01-09 10:57:35] Checking for CVMFS
[2026-01-09 10:57:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:57:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:57:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:57:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:57:36] 2.11.2.0 2979 351265 92316 154948 1 59 12310006 20275201 1 130560 1 147624755 99.956 20300466 16097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:57:36] CVMFS is ok
[2026-01-09 10:57:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:57:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:57:36] Further information can be found at the LHC@home message board.
[2026-01-09 10:57:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:57:36] Checking for apptainer binary...
[2026-01-09 10:57:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:57:36] Running /usr/bin/apptainer --version
[2026-01-09 10:57:36] apptainer version 1.3.2-1.el7
[2026-01-09 10:57:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:57:37] c-205-21.aglt2.org
[2026-01-09 10:57:37] apptainer works
[2026-01-09 10:57:37] Set ATHENA_PROC_NUMBER=12
[2026-01-09 10:57:37] Set ATHENA_CORE_NUMBER=12
[2026-01-09 10:57:37] Starting ATLAS job with PandaID=6963186708
[2026-01-09 10:57:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:39:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:39:19]  lfn=log.47898826._036684.job.log.tgz.1
[2026-01-09 12:39:19]  mtime=0
[2026-01-09 12:39:19]  protocol_id=None
[2026-01-09 12:39:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 12:39:19]  replicas=None
[2026-01-09 12:39:19]  scope=mc23_13p6TeV
[2026-01-09 12:39:19]  status=None
[2026-01-09 12:39:19]  status_code=0
[2026-01-09 12:39:19]  storage_token=
[2026-01-09 12:39:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963186708/log.47898826._036684.job.log.tgz.1
[2026-01-09 12:39:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/0e/log.47898826._036684.job.log.tgz.1
[2026-01-09 12:39:19]  workdir=None
[2026-01-09 12:39:19] ]
[2026-01-09 12:39:19] 2026-01-09 17:38:42,819 | INFO     | transferring file log.47898826._036684.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963186708/log.47898826._036684.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 12:39:19] 2026-01-09 17:38:42,819 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963186708/log.47898826._036684.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._036684.job
[2026-01-09 12:39:19] 2026-01-09 17:38:42,839 | INFO     | adding to output.list: log.47898826._036684.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/0e/log.47898826._036684.job.log.tg
[2026-01-09 12:39:19] 2026-01-09 17:38:42,840 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 12:39:19] 2026-01-09 17:38:42,840 | INFO     | summary of transferred files:
[2026-01-09 12:39:19] 2026-01-09 17:38:42,840 | INFO     |  -- lfn=log.47898826._036684.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 12:39:19] 2026-01-09 17:38:42,840 | INFO     | stage-out finished correctly
[2026-01-09 12:39:19] 2026-01-09 17:38:42,938 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 12:39:19] 2026-01-09 17:38:42,979 | INFO     | monitor loop #446: job 0:6963186708 is in state 'finished'
[2026-01-09 12:39:19] 2026-01-09 17:38:42,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:39:19] 2026-01-09 17:38:43,347 | INFO     | job 6963186708 has state=finished
[2026-01-09 12:39:19] 2026-01-09 17:38:43,348 | INFO     | preparing for final server update for job 6963186708 in state='finished'
[2026-01-09 12:39:19] 2026-01-09 17:38:43,349 | INFO     | this job has now completed (state=finished)
[2026-01-09 12:39:19] 2026-01-09 17:38:43,349 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 12:39:19] 2026-01-09 17:38:43,349 | INFO     | log transfer has been attempted: DONE
[2026-01-09 12:39:19] 2026-01-09 17:38:43,350 | INFO     | job 6963186708 has finished - writing final server update
[2026-01-09 12:39:19] 2026-01-09 17:38:43,350 | INFO     | total number of processed events: 400 (read)
[2026-01-09 12:39:19] 2026-01-09 17:38:43,351 | INFO     | executing command: lscpu
[2026-01-09 12:39:19] 2026-01-09 17:38:43,375 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 12:39:19] 2026-01-09 17:38:44,134 | INFO     | time since job start (6052s) is within the limit (349056.0s)
[2026-01-09 12:39:19] 2026-01-09 17:38:45,493 | INFO     | monitor loop #447: job 0:6963186708 is in state 'finished'
[2026-01-09 12:39:19] 2026-01-09 17:38:45,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:39:19] 2026-01-09 17:38:46,141 | INFO     | time since job start (6054s) is within the limit (349056.0s)
[2026-01-09 12:39:19] 2026-01-09 17:38:47,995 | INFO     | monitor loop #448: job 0:6963186708 is in state 'finished'
[2026-01-09 12:39:19] 2026-01-09 17:38:47,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:39:19] 2026-01-09 17:38:48,000 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 12:39:19] 2026-01-09 17:38:48,005 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2026-01-09 12:39:19] 2026-01-09 17:38:48,008 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963186708/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:39:19] 2026-01-09 17:38:48,009 | INFO     | extracted standard info from prmon json
[2026-01-09 12:39:19] 2026-01-09 17:38:48,009 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:39:19] 2026-01-09 17:38:48,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:39:19] 2026-01-09 17:38:48,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:39:19] 2026-01-09 17:38:48,010 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:39:19] 2026-01-09 17:38:48,012 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:39:19] 2026-01-09 17:38:48,012 | INFO     | sum of square deviations: 241429643.0
[2026-01-09 12:39:19] 2026-01-09 17:38:48,013 | INFO     | sum of deviations: -3894189004.0000014
[2026-01-09 12:39:19] 2026-01-09 17:38:48,013 | INFO     | mean x: 1767977381.5
[2026-01-09 12:39:19] 2026-01-09 17:38:48,013 | INFO     | mean y: 2714995.2608695654
[2026-01-09 12:39:19] 2026-01-09 17:38:48,013 | INFO     | intersect: 28519669221.788944
[2026-01-09 12:39:19] 2026-01-09 17:38:48,013 | INFO     | chi2: 0.07609369834945295
[2026-01-09 12:39:19] 2026-01-09 17:38:48,014 | INFO     | current memory leak: -16.13 B/s (using 92 data points, chi2=0.08)
[2026-01-09 12:39:19] 2026-01-09 17:38:48,014 | INFO     | could have reported an average CPU frequency of 2134 MHz (7 samples)
[2026-01-09 12:39:19] 2026-01-09 17:38:48,014 | INFO     | ..............................
[2026-01-09 12:39:19] 2026-01-09 17:38:48,014 | INFO     | . Timing measurements:
[2026-01-09 12:39:19] 2026-01-09 17:38:48,014 | INFO     | . get job = 0 s
[2026-01-09 12:39:19] 2026-01-09 17:38:48,014 | INFO     | . initial setup = 2 s
[2026-01-09 12:39:19] 2026-01-09 17:38:48,015 | INFO     | . payload setup = 6 s
[2026-01-09 12:39:19] 2026-01-09 17:38:48,015 | INFO     | . stage-in = 0 s
[2026-01-09 12:39:19] 2026-01-09 17:38:48,015 | INFO     | . payload execution = 6023 s
[2026-01-09 12:39:19] 2026-01-09 17:38:48,015 | INFO     | . stage-out = 0 s
[2026-01-09 12:39:19] 2026-01-09 17:38:48,015 | INFO     | . log creation = 0 s
[2026-01-09 12:39:19] 2026-01-09 17:38:48,015 | INFO     | ..............................
[2026-01-09 12:39:19] 2026-01-09 17:38:48,098 | INFO     | 
[2026-01-09 12:39:19] 2026-01-09 17:38:48,099 | INFO     | job summary report
[2026-01-09 12:39:19] 2026-01-09 17:38:48,099 | INFO     | --------------------------------------------------
[2026-01-09 12:39:19] 2026-01-09 17:38:48,099 | INFO     | PanDA job id: 6963186708
[2026-01-09 12:39:19] 2026-01-09 17:38:48,099 | INFO     | task id: 47898826
[2026-01-09 12:39:19] 2026-01-09 17:38:48,099 | INFO     | errors: (none)
[2026-01-09 12:39:19] 2026-01-09 17:38:48,100 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:39:19] 2026-01-09 17:38:48,100 | INFO     | pilot state: finished 
[2026-01-09 12:39:19] 2026-01-09 17:38:48,100 | INFO     | transexitcode: 0
[2026-01-09 12:39:19] 2026-01-09 17:38:48,100 | INFO     | exeerrorcode: 0
[2026-01-09 12:39:19] 2026-01-09 17:38:48,100 | INFO     | exeerrordiag: 
[2026-01-09 12:39:19] 2026-01-09 17:38:48,100 | INFO     | exitcode: 0
[2026-01-09 12:39:19] 2026-01-09 17:38:48,100 | INFO     | exitmsg: OK
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | cpuconsumptiontime: 66387 s
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | nevents: 400
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | neventsw: 0
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | pid: 10038
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | pgrp: 10038
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | corecount: 12
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | event service: False
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | sizes: {0: 2283970, 5: 2284232, 11: 2284288, 6034: 2311040, 6035: 2320094, 6040: 2320232}
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | --------------------------------------------------
[2026-01-09 12:39:19] 2026-01-09 17:38:48,101 | INFO     | 
[2026-01-09 12:39:19] 2026-01-09 17:38:48,102 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 12:39:19] 2026-01-09 17:38:48,123 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,123 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,123 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,123 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,126 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:39:19] 2026-01-09 17:38:48,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,126 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:39:19] 2026-01-09 17:38:48,127 | INFO     | job 6963186708 has completed (purged errors)
[2026-01-09 12:39:19] 2026-01-09 17:38:48,127 | INFO     | overall cleanup function is called
[2026-01-09 12:39:19] 2026-01-09 17:38:49,135 | INFO     | --- collectZombieJob: --- 10, [10038]
[2026-01-09 12:39:19] 2026-01-09 17:38:49,136 | INFO     | zombie collector waiting for pid 10038
[2026-01-09 12:39:19] 2026-01-09 17:38:49,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:39:19] 2026-01-09 17:38:49,136 | INFO     | collected zombie processes
[2026-01-09 12:39:19] 2026-01-09 17:38:49,136 | INFO     | will attempt to kill all subprocesses of pid=10038
[2026-01-09 12:39:19] 2026-01-09 17:38:49,228 | INFO     | process IDs to be killed: [10038] (in reverse order)
[2026-01-09 12:39:19] 2026-01-09 17:38:49,277 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:39:19] 2026-01-09 17:38:49,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:39:19] 2026-01-09 17:38:49,281 | INFO     | did not find any defunct processes belonging to 10038
[2026-01-09 12:39:19] 2026-01-09 17:38:49,283 | INFO     | did not find any defunct processes belonging to 10038
[2026-01-09 12:39:19] 2026-01-09 17:38:49,283 | INFO     | ready for new job
[2026-01-09 12:39:19] 2026-01-09 17:38:49,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:39:19] 2026-01-09 17:38:49,285 | INFO     | ***************************************
[2026-01-09 12:39:19] 2026-01-09 17:38:49,285 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:39:19] 2026-01-09 17:38:49,285 | INFO     | ***************************************
[2026-01-09 12:39:19] 2026-01-09 17:38:49,285 | INFO     | 
[2026-01-09 12:39:19] 2026-01-09 17:38:49,286 | INFO     | architecture information:
[2026-01-09 12:39:19] 2026-01-09 17:38:49,287 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:39:19] 2026-01-09 17:38:49,301 | INFO     | cat /etc/os-release:
[2026-01-09 12:39:19] NAME="CentOS Linux"
[2026-01-09 12:39:19] VERSION="7 (Core)"
[2026-01-09 12:39:19] ID="centos"
[2026-01-09 12:39:19] ID_LIKE="rhel fedora"
[2026-01-09 12:39:19] VERSION_ID="7"
[2026-01-09 12:39:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:39:19] ANSI_COLOR="0;31"
[2026-01-09 12:39:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:39:19] HOME_URL="https://www.centos.org/"
[2026-01-09 12:39:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:39:19] 
[2026-01-09 12:39:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:39:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:39:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:39:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:39:19] 
[2026-01-09 12:39:19] 2026-01-09 17:38:49,301 | INFO     | ***************************************
[2026-01-09 12:39:19] 2026-01-09 17:38:49,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 12:39:19] 2026-01-09 17:38:49,820 | INFO     | sufficient remaining disk space (29315039232 B)
[2026-01-09 12:39:19] 2026-01-09 17:38:49,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:39:19] 2026-01-09 17:38:49,820 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:39:19] 2026-01-09 17:38:49,820 | INFO     | update_server=False
[2026-01-09 12:39:19] 2026-01-09 17:38:49,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:39:19] 2026-01-09 17:38:49,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:39:19] 2026-01-09 17:38:49,821 | INFO     | aborting loop
[2026-01-09 12:39:19] 2026-01-09 17:38:49,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:39:19] 2026-01-09 17:38:49,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:39:19] 2026-01-09 17:38:49,950 | INFO     | all data control threads have been joined
[2026-01-09 12:39:19] 2026-01-09 17:38:50,538 | INFO     | all job control threads have been joined
[2026-01-09 12:39:19] 2026-01-09 17:38:50,812 | INFO     | all payload control threads have been joined
[2026-01-09 12:39:19] 2026-01-09 17:38:50,824 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:50,826 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:50,827 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:50,860 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:50,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:39:19] 2026-01-09 17:38:50,956 | INFO     | [data] control thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:51,270 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:51,542 | INFO     | [job] control thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:51,770 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:51,817 | INFO     | [payload] control thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:51,907 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:51,926 | INFO     | [job] validate thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:52,061 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:52,062 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:52,954 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:38:53,828 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:39:00,092 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:39:19] 2026-01-09 17:39:01,098 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:39:19] 2026-01-09 17:39:01,427 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:39:19] 2026-01-09 17:39:02,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140184187451200)>', '<ExcThread(monitor, started 140183085242112)>']
[2026-01-09 12:39:19] 2026-01-09 17:39:07,776 | INFO     | all workflow threads have been joined
[2026-01-09 12:39:19] 2026-01-09 17:39:07,777 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:39:19] 2026-01-09 17:39:07,777 | INFO     | traces error code: 0
[2026-01-09 12:39:19] 2026-01-09 17:39:07,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:39:19] 2026-01-09 17:39:19,343 | INFO     | PID=3615 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 12:39:19] 2026-01-09 17:39:19,343 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:39:19] 2026-01-09 17:39:19,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:39:19] 2026-01-09 17:39:19,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:39:19] 2026-01-09 17:39:19,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:39:19] 2026-01-09 17:39:19,344 | INFO     | [monitor] control thread has ended
[2026-01-09 12:39:19] 2026-01-09 17:39:19,433 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:39:19] 2026-01-09 17:39:19,436 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:39:19] 2026-01-09 17:39:19,440 [wrapper] pilotpid: 3615
[2026-01-09 12:39:19] 2026-01-09 17:39:19,444 [wrapper] Pilot exit status: 0
[2026-01-09 12:39:19] 2026-01-09 17:39:19,458 [wrapper] pandaids: 6963186708
[2026-01-09 12:39:19] 2026-01-09 17:39:19,497 [wrapper] cleanup supervisor_pilot  9825 3616
[2026-01-09 12:39:19] 2026-01-09 17:39:19,501 [wrapper] Test setup, not cleaning
[2026-01-09 12:39:19] 2026-01-09 17:39:19,504 [wrapper] apfmon messages muted
[2026-01-09 12:39:19] 2026-01-09 17:39:19,508 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:39:19] 2026-01-09 17:39:19,512 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:39:19]  *** Error codes and diagnostics ***
[2026-01-09 12:39:19]     "exeErrorCode": 0,
[2026-01-09 12:39:19]     "exeErrorDiag": "",
[2026-01-09 12:39:19]     "pilotErrorCode": 0,
[2026-01-09 12:39:19]     "pilotErrorDiag": "",
[2026-01-09 12:39:19]  *** Listing of results directory ***
[2026-01-09 12:39:19] total 439360
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 12:39:19] -rwx------ 1 boincer umatlas     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:01 queuedata.json
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas       100 Jan  9 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:39:19] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 10:57 run_atlas
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas       105 Jan  9 10:57 job.xml
[2026-01-09 12:39:19] -rw-r--r-- 2 boincer umatlas 223607282 Jan  9 10:57 EVNT.47898824._001406.pool.root.1
[2026-01-09 12:39:19] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:57 start_atlas.sh
[2026-01-09 12:39:19] drwxrwx--x 2 boincer umatlas      4096 Jan  9 10:57 shared
[2026-01-09 12:39:19] -rw-r--r-- 2 boincer umatlas    592396 Jan  9 10:57 input.tar.gz
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas         0 Jan  9 10:57 boinc_lockfile
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 10:57 pandaJob.out
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas        57 Jan  9 10:57 setup.sh.local
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas    989377 Jan  9 10:57 agis_schedconf.cvmfs.json
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas   1516240 Jan  9 10:57 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:39:19] drwx------ 5 boincer umatlas      4096 Jan  9 10:57 pilot3
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas 219862589 Jan  9 12:38 HITS.47898826._036684.pool.root.1
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas       529 Jan  9 12:38 boinc_task_state.xml
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas      1046 Jan  9 12:38 memory_monitor_summary.json
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas    404763 Jan  9 12:38 log.47898826._036684.job.log.tgz.1
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 12:38 init_data.xml
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas      7844 Jan  9 12:38 heartbeat.json
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas        27 Jan  9 12:38 wrapper_checkpoint.txt
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 12:38 boinc_mmap_file
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas        95 Jan  9 12:39 pilot_heartbeat.json
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas       744 Jan  9 12:39 pilotlog.txt
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas    859471 Jan  9 12:39 log.47898826._036684.job.log.1
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas       357 Jan  9 12:39 output.list
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas       620 Jan  9 12:39 runtime_log
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas   1280000 Jan  9 12:39 result.tar.gz
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 12:39 runtime_log.err
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas       659 Jan  9 12:39 3BqLDmO0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsfgKDmOWbOen.diag
[2026-01-09 12:39:19] -rw-r--r-- 1 boincer umatlas     21667 Jan  9 12:39 stderr.txt
[2026-01-09 12:39:19] HITS file was successfully produced:
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas 219862589 Jan  9 12:38 shared/HITS.pool.root.1
[2026-01-09 12:39:19]  *** Contents of shared directory: ***
[2026-01-09 12:39:19] total 434932
[2026-01-09 12:39:19] -rw-r--r-- 2 boincer umatlas 223607282 Jan  9 10:57 ATLAS.root_0
[2026-01-09 12:39:19] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:57 start_atlas.sh
[2026-01-09 12:39:19] -rw-r--r-- 2 boincer umatlas    592396 Jan  9 10:57 input.tar.gz
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas 219862589 Jan  9 12:38 HITS.pool.root.1
[2026-01-09 12:39:19] -rw------- 1 boincer umatlas   1280000 Jan  9 12:39 result.tar.gz
12:39:21 (32200): run_atlas exited; CPU time 66372.734020
12:39:21 (32200): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN