Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:58:44 (2576890): wrapper (7.7.26015): starting
01:58:44 (2576890): wrapper: running run_atlas (--nthreads 6)
[2026-01-10 01:58:44] Arguments: --nthreads 6
[2026-01-10 01:58:44] Threads: 6
[2026-01-10 01:58:44] Checking for CVMFS
[2026-01-10 01:58:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:58:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:58:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:58:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:58:45] 2.13.3.0 2288015 675 58900 154950 2 57 12012815 20971521 929 130560 0 901659 99.994 27370 17 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 01:58:45] CVMFS is ok
[2026-01-10 01:58:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:58:45] Checking for apptainer binary...
[2026-01-10 01:58:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 01:58:45] Running /usr/bin/apptainer --version
[2026-01-10 01:58:45] apptainer version 1.4.4-1.el9
[2026-01-10 01:58:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:58:45] testio006
[2026-01-10 01:58:45] apptainer works
[2026-01-10 01:58:45] Set ATHENA_PROC_NUMBER=6
[2026-01-10 01:58:45] Set ATHENA_CORE_NUMBER=6
[2026-01-10 01:58:45] Starting ATLAS job with PandaID=6963378505
[2026-01-10 01:58:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:38:01]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:38:01] 2026-01-10 02:36:58,122 | INFO     | extracted standard info from prmon json
[2026-01-10 11:38:01] 2026-01-10 02:36:58,122 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:38:01] 2026-01-10 02:36:58,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:38:01] 2026-01-10 02:36:58,127 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:38:01] 2026-01-10 02:36:58,128 | INFO     | sum of square deviations: 56822728662.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,132 | INFO     | sum of deviations: 584051115907.5001
[2026-01-10 11:38:01] 2026-01-10 02:36:58,132 | INFO     | mean x: 1767995258.5
[2026-01-10 11:38:01] 2026-01-10 02:36:58,132 | INFO     | mean y: 2667631.9876760566
[2026-01-10 11:38:01] 2026-01-10 02:36:58,132 | INFO     | intersect: -18169631163.945396
[2026-01-10 11:38:01] 2026-01-10 02:36:58,132 | INFO     | chi2: 8.238377273301262
[2026-01-10 11:38:01] 2026-01-10 02:36:58,133 | INFO     | sum of square deviations: 55335296122.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,137 | INFO     | sum of deviations: 755919994354.9995
[2026-01-10 11:38:01] 2026-01-10 02:36:58,137 | INFO     | mean x: 1767995106.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,137 | INFO     | mean y: 2685248.8792184726
[2026-01-10 11:38:01] 2026-01-10 02:36:58,137 | INFO     | intersect: -24149401108.454666
[2026-01-10 11:38:01] 2026-01-10 02:36:58,138 | INFO     | chi2: 5.240086121961274
[2026-01-10 11:38:01] 2026-01-10 02:36:58,138 | INFO     | current chi2=5.240086121961274 (change=36.394195748436765 %)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,138 | INFO     | sum of square deviations: 53874050119.5
[2026-01-10 11:38:01] 2026-01-10 02:36:58,142 | INFO     | sum of deviations: 808267432031.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,142 | INFO     | mean x: 1767994953.5
[2026-01-10 11:38:01] 2026-01-10 02:36:58,142 | INFO     | mean y: 2690677.1039426522
[2026-01-10 11:38:01] 2026-01-10 02:36:58,142 | INFO     | intersect: -26522375430.594788
[2026-01-10 11:38:01] 2026-01-10 02:36:58,143 | INFO     | chi2: 4.428194721385339
[2026-01-10 11:38:01] 2026-01-10 02:36:58,143 | INFO     | current chi2=4.428194721385339 (change=15.493856048916566 %)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,143 | INFO     | right removable region: 557
[2026-01-10 11:38:01] 2026-01-10 02:36:58,143 | INFO     | sum of square deviations: 55335296122.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,147 | INFO     | sum of deviations: 414980659125.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,147 | INFO     | mean x: 1767995411.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,147 | INFO     | mean y: 2684953.740674956
[2026-01-10 11:38:01] 2026-01-10 02:36:58,148 | INFO     | intersect: -13256192334.440313
[2026-01-10 11:38:01] 2026-01-10 02:36:58,148 | INFO     | chi2: 5.545720956765748
[2026-01-10 11:38:01] 2026-01-10 02:36:58,148 | INFO     | current chi2=5.545720956765748 (change=32.68430453242062 %)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,148 | INFO     | sum of square deviations: 53874050119.5
[2026-01-10 11:38:01] 2026-01-10 02:36:58,152 | INFO     | sum of deviations: 284041035467.5001
[2026-01-10 11:38:01] 2026-01-10 02:36:58,152 | INFO     | mean x: 1767995563.5
[2026-01-10 11:38:01] 2026-01-10 02:36:58,153 | INFO     | mean y: 2698612.0448028673
[2026-01-10 11:38:01] 2026-01-10 02:36:58,153 | INFO     | intersect: -9318733310.087934
[2026-01-10 11:38:01] 2026-01-10 02:36:58,153 | INFO     | chi2: 4.053024492442189
[2026-01-10 11:38:01] 2026-01-10 02:36:58,153 | INFO     | current chi2=4.053024492442189 (change=26.916184134769306 %)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,153 | INFO     | sum of square deviations: 52438758092.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,157 | INFO     | sum of deviations: 260412786270.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,157 | INFO     | mean x: 1767995716.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,157 | INFO     | mean y: 2701119.200723327
[2026-01-10 11:38:01] 2026-01-10 02:36:58,157 | INFO     | intersect: -8777230123.8167
[2026-01-10 11:38:01] 2026-01-10 02:36:58,157 | INFO     | chi2: 4.031361865439722
[2026-01-10 11:38:01] 2026-01-10 02:36:58,158 | INFO     | current chi2=4.031361865439722 (change=0.5344805352857337 %)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,158 | INFO     | left removable region: 30
[2026-01-10 11:38:01] 2026-01-10 02:36:58,158 | INFO     | sum of square deviations: 45384620248.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,161 | INFO     | sum of deviations: 402568223880.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,161 | INFO     | mean x: 1767995838.0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,161 | INFO     | mean y: 2734387.8975332067
[2026-01-10 11:38:01] 2026-01-10 02:36:58,161 | INFO     | intersect: -15679647450.744312
[2026-01-10 11:38:01] 2026-01-10 02:36:58,161 | INFO     | chi2: 0.10100620552452039
[2026-01-10 11:38:01] 2026-01-10 02:36:58,161 | INFO     | current memory leak: 8.87 B/s (using 527 data points, chi2=0.10)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,161 | INFO     | could have reported an average CPU frequency of 3938 MHz (22 samples)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | ..............................
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | . Timing measurements:
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | . get job = 0 s
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | . initial setup = 5 s
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | . payload setup = 6 s
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | . stage-in = 0 s
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | . payload execution = 34609 s
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | . stage-out = 4 s
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | . log creation = 0 s
[2026-01-10 11:38:01] 2026-01-10 02:36:58,162 | INFO     | ..............................
[2026-01-10 11:38:01] 2026-01-10 02:36:58,218 | INFO     | 
[2026-01-10 11:38:01] 2026-01-10 02:36:58,218 | INFO     | job summary report
[2026-01-10 11:38:01] 2026-01-10 02:36:58,218 | INFO     | --------------------------------------------------
[2026-01-10 11:38:01] 2026-01-10 02:36:58,218 | INFO     | PanDA job id: 6963378505
[2026-01-10 11:38:01] 2026-01-10 02:36:58,218 | INFO     | task id: 47962010
[2026-01-10 11:38:01] 2026-01-10 02:36:58,218 | INFO     | errors: (none)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,218 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | pilot state: finished 
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | transexitcode: 0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | exeerrorcode: 0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | exeerrordiag: 
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | exitcode: 0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | exitmsg: OK
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | cpuconsumptiontime: 199232 s
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | nevents: 900
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | neventsw: 0
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | pid: 2587366
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | pgrp: 2587366
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | corecount: 6
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | event service: False
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | sizes: {0: 2284451, 1: 2284650, 5: 2284912, 11: 2284968, 34619: 2325781, 34624: 2334987, 34665: 2335177}
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | --------------------------------------------------
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | 
[2026-01-10 11:38:01] 2026-01-10 02:36:58,219 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-10 11:38:01] 2026-01-10 02:36:58,232 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,234 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,234 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:38:01] 2026-01-10 02:36:58,234 | INFO     | job 6963378505 has completed (purged errors)
[2026-01-10 11:38:01] 2026-01-10 02:36:58,234 | INFO     | overall cleanup function is called
[2026-01-10 11:38:01] 2026-01-10 02:36:59,249 | INFO     | --- collectZombieJob: --- 10, [2587366]
[2026-01-10 11:38:01] 2026-01-10 02:36:59,249 | INFO     | zombie collector waiting for pid 2587366
[2026-01-10 11:38:01] 2026-01-10 02:36:59,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:38:01] 2026-01-10 02:36:59,250 | INFO     | collected zombie processes
[2026-01-10 11:38:01] 2026-01-10 02:36:59,250 | INFO     | will attempt to kill all subprocesses of pid=2587366
[2026-01-10 11:38:01] 2026-01-10 02:36:59,332 | INFO     | process IDs to be killed: [2587366] (in reverse order)
[2026-01-10 11:38:01] 2026-01-10 02:36:59,375 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:38:01] 2026-01-10 02:36:59,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:38:01] 2026-01-10 02:36:59,378 | INFO     | did not find any defunct processes belonging to 2587366
[2026-01-10 11:38:01] 2026-01-10 02:36:59,381 | INFO     | did not find any defunct processes belonging to 2587366
[2026-01-10 11:38:01] 2026-01-10 02:36:59,381 | INFO     | ready for new job
[2026-01-10 11:38:01] 2026-01-10 02:36:59,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:38:01] 2026-01-10 02:36:59,383 | INFO     | ***************************************
[2026-01-10 11:38:01] 2026-01-10 02:36:59,383 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:38:01] 2026-01-10 02:36:59,383 | INFO     | ***************************************
[2026-01-10 11:38:01] 2026-01-10 02:36:59,383 | INFO     | 
[2026-01-10 11:38:01] 2026-01-10 02:36:59,384 | INFO     | architecture information:
[2026-01-10 11:38:01] 2026-01-10 02:36:59,385 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:38:01] 2026-01-10 02:36:59,396 | INFO     | cat /etc/os-release:
[2026-01-10 11:38:01] NAME="CentOS Linux"
[2026-01-10 11:38:01] VERSION="7 (Core)"
[2026-01-10 11:38:01] ID="centos"
[2026-01-10 11:38:01] ID_LIKE="rhel fedora"
[2026-01-10 11:38:01] VERSION_ID="7"
[2026-01-10 11:38:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:38:01] ANSI_COLOR="0;31"
[2026-01-10 11:38:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:38:01] HOME_URL="https://www.centos.org/"
[2026-01-10 11:38:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:38:01] 
[2026-01-10 11:38:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:38:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:38:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:38:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:38:01] 
[2026-01-10 11:38:01] 2026-01-10 02:36:59,396 | INFO     | ***************************************
[2026-01-10 11:38:01] 2026-01-10 02:36:59,899 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-10 11:38:01] 2026-01-10 02:36:59,911 | INFO     | sufficient remaining disk space (91449458688 B)
[2026-01-10 11:38:01] 2026-01-10 02:36:59,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:38:01] 2026-01-10 02:36:59,912 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:38:01] 2026-01-10 02:36:59,912 | INFO     | update_server=False
[2026-01-10 11:38:01] 2026-01-10 02:36:59,912 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:38:01] 2026-01-10 02:36:59,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:38:01] 2026-01-10 02:36:59,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:38:01] 2026-01-10 02:36:59,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:38:01] 2026-01-10 02:36:59,912 | INFO     | aborting loop
[2026-01-10 11:38:01] 2026-01-10 02:37:00,097 | INFO     | all data control threads have been joined
[2026-01-10 11:38:01] 2026-01-10 02:37:00,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:38:01] 2026-01-10 02:37:00,917 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:00,917 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:00,917 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:01,013 | INFO     | all job control threads have been joined
[2026-01-10 11:38:01] 2026-01-10 02:37:01,073 | INFO     | [job] validate thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:01,102 | INFO     | [data] control thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:01,375 | INFO     | all payload control threads have been joined
[2026-01-10 11:38:01] 2026-01-10 02:37:01,635 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:01,788 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:01,824 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:01,931 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:02,018 | INFO     | [job] control thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:02,071 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:02,117 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:02,223 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:02,380 | INFO     | [payload] control thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:02,684 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:03,917 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:38:01] 2026-01-10 02:37:30,159 | INFO     | PID=2580667 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:38:01] 2026-01-10 02:37:30,159 | INFO     | .. there are 2 such processes running
[2026-01-10 11:38:01] 2026-01-10 02:37:30,159 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:38:01] 2026-01-10 02:37:30,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:38:01] 2026-01-10 02:37:30,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:38:01] 2026-01-10 02:37:55,334 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:38:01] 2026-01-10 02:37:56,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155651131200)>', '<ExcThread(monitor, started 140155293779712)>']
[2026-01-10 11:38:01] 2026-01-10 02:37:57,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:38:01] 2026-01-10 02:37:57,293 | INFO     | [monitor] control thread has ended
[2026-01-10 11:38:01] 2026-01-10 02:38:01,364 | INFO     | all workflow threads have been joined
[2026-01-10 11:38:01] 2026-01-10 02:38:01,364 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:38:01] 2026-01-10 02:38:01,364 | INFO     | traces error code: 0
[2026-01-10 11:38:01] 2026-01-10 02:38:01,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:38:01] 2026-01-10 02:38:01,456 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:38:01] 2026-01-10 02:38:01,458 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:38:01] 2026-01-10 02:38:01,461 [wrapper] pilotpid: 2580667
[2026-01-10 11:38:01] 2026-01-10 02:38:01,463 [wrapper] Pilot exit status: 0
[2026-01-10 11:38:01] 2026-01-10 02:38:01,471 [wrapper] pandaids: 6963378505
[2026-01-10 11:38:01] 2026-01-10 02:38:01,496 [wrapper] cleanup supervisor_pilot 2757474 2580668
[2026-01-10 11:38:01] 2026-01-10 02:38:01,498 [wrapper] Test setup, not cleaning
[2026-01-10 11:38:01] 2026-01-10 02:38:01,500 [wrapper] apfmon messages muted
[2026-01-10 11:38:01] 2026-01-10 02:38:01,503 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:38:01] 2026-01-10 02:38:01,505 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:38:01]  *** Error codes and diagnostics ***
[2026-01-10 11:38:01]     "exeErrorCode": 0,
[2026-01-10 11:38:01]     "exeErrorDiag": "",
[2026-01-10 11:38:01]     "pilotErrorCode": 0,
[2026-01-10 11:38:01]     "pilotErrorDiag": "",
[2026-01-10 11:38:01]  *** Listing of results directory ***
[2026-01-10 11:38:01] total 1172340
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc    579449 Jan  9 16:13 pilot3.tar.gz
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc      5112 Jan  9 16:13 queuedata.json
[2026-01-10 11:38:01] -rwx------. 1 boinc boinc     36322 Jan  9 16:14 runpilot2-wrapper.sh
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc       100 Jan 10 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:38:01] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 01:58 run_atlas
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc       105 Jan 10 01:58 job.xml
[2026-01-10 11:38:01] -rw-r--r--. 2 boinc boinc 393083970 Jan 10 01:58 EVNT.47962006._000087.pool.root.1
[2026-01-10 11:38:01] -rw-r--r--. 2 boinc boinc    592613 Jan 10 01:58 input.tar.gz
[2026-01-10 11:38:01] -rw-r--r--. 2 boinc boinc     15847 Jan 10 01:58 start_atlas.sh
[2026-01-10 11:38:01] drwxrwx--x. 2 boinc boinc        68 Jan 10 01:58 shared
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc         0 Jan 10 01:58 boinc_lockfile
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc      2892 Jan 10 01:58 pandaJob.out
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc    989356 Jan 10 01:58 agis_schedconf.cvmfs.json
[2026-01-10 11:38:01] drwx------. 5 boinc boinc      4096 Jan 10 01:58 pilot3
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc      9363 Jan 10 03:08 init_data.xml
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc       533 Jan 10 11:27 boinc_task_state.xml
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc 790542683 Jan 10 11:35 HITS.47962010._001098.pool.root.1
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc      1034 Jan 10 11:36 memory_monitor_summary.json
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc   1516240 Jan 10 11:36 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc   1592599 Jan 10 11:36 log.47962010._001098.job.log.tgz.1
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc      8566 Jan 10 11:36 heartbeat.json
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc        95 Jan 10 11:37 pilot_heartbeat.json
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc      8192 Jan 10 11:37 boinc_mmap_file
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc        29 Jan 10 11:37 wrapper_checkpoint.txt
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc      4823 Jan 10 11:38 pilotlog.txt
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc   4879101 Jan 10 11:38 log.47962010._001098.job.log.1
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc       353 Jan 10 11:38 output.list
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc       620 Jan 10 11:38 runtime_log
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc   6492160 Jan 10 11:38 result.tar.gz
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc       651 Jan 10 11:38 YT4NDmGsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPHhKDma9oqjm.diag
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc      8776 Jan 10 11:38 runtime_log.err
[2026-01-10 11:38:01] -rw-r--r--. 1 boinc boinc     20578 Jan 10 11:38 stderr.txt
[2026-01-10 11:38:01] HITS file was successfully produced:
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc 790542683 Jan 10 11:35 shared/HITS.pool.root.1
[2026-01-10 11:38:01]  *** Contents of shared directory: ***
[2026-01-10 11:38:01] total 1162824
[2026-01-10 11:38:01] -rw-r--r--. 2 boinc boinc 393083970 Jan 10 01:58 ATLAS.root_0
[2026-01-10 11:38:01] -rw-r--r--. 2 boinc boinc    592613 Jan 10 01:58 input.tar.gz
[2026-01-10 11:38:01] -rw-r--r--. 2 boinc boinc     15847 Jan 10 01:58 start_atlas.sh
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc 790542683 Jan 10 11:35 HITS.pool.root.1
[2026-01-10 11:38:01] -rw-------. 1 boinc boinc   6492160 Jan 10 11:38 result.tar.gz
11:38:02 (2576890): run_atlas exited; CPU time 199211.928678
11:38:02 (2576890): called boinc_finish(0)

</stderr_txt>
]]>

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