Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:56:43 (1605656): wrapper (7.7.26015): starting
02:56:43 (1605656): wrapper: running run_atlas (--nthreads 2)
[2026-01-10 02:56:43] Arguments: --nthreads 2
[2026-01-10 02:56:43] Threads: 2
[2026-01-10 02:56:43] Checking for CVMFS
[2026-01-10 02:56:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 02:56:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 02:56:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 02:56:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 02:56:44] 2.9.2.0 1047577 2994 56408 154963 0 57 23543277 36864001 0 130560 0 1415797 99.984 112482 6535 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 02:56:44] CVMFS is ok
[2026-01-10 02:56:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 02:56:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 02:56:44] Further information can be found at the LHC@home message board.
[2026-01-10 02:56:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 02:56:44] Checking for apptainer binary...
[2026-01-10 02:56:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 02:56:44] Running /usr/bin/apptainer --version
[2026-01-10 02:56:44] apptainer version 1.4.2-1.1
[2026-01-10 02:56:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 02:56:44] itA173
[2026-01-10 02:56:44] apptainer works
[2026-01-10 02:56:44] Set ATHENA_PROC_NUMBER=2
[2026-01-10 02:56:44] Set ATHENA_CORE_NUMBER=2
[2026-01-10 02:56:44] Starting ATLAS job with PandaID=6963378610
[2026-01-10 02:56:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:55:00 (1647995): wrapper (7.7.26015): starting
07:55:00 (1647995): wrapper: running run_atlas (--nthreads 2)
[2026-01-10 07:55:00] Arguments: --nthreads 2
[2026-01-10 07:55:00] Threads: 2
[2026-01-10 07:55:00] This job has been restarted, cleaning up previous attempt
[2026-01-10 07:55:00] Checking for CVMFS
[2026-01-10 07:55:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 07:55:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 07:55:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 07:55:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 07:55:00] 2.9.2.0 1648119 0 30016 154970 4 1 23599970 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 07:55:00] CVMFS is ok
[2026-01-10 07:55:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 07:55:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 07:55:00] Further information can be found at the LHC@home message board.
[2026-01-10 07:55:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:55:00] Checking for apptainer binary...
[2026-01-10 07:55:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 07:55:00] Running /usr/bin/apptainer --version
[2026-01-10 07:55:00] apptainer version 1.4.2-1.1
[2026-01-10 07:55:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:55:00] itA173
[2026-01-10 07:55:00] apptainer works
[2026-01-10 07:55:00] Set ATHENA_PROC_NUMBER=2
[2026-01-10 07:55:00] Set ATHENA_CORE_NUMBER=2
[2026-01-10 07:55:00] Starting ATLAS job with PandaID=6963378610
[2026-01-10 07:55:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:02:20]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:02:20] 2026-01-10 20:01:28,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:02:20] 2026-01-10 20:01:30,468 | INFO     | time since job start (47184s) is within the limit (349056.0s)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,413 | INFO     | monitor loop #3601: job 0:6963378610 is in state 'finished'
[2026-01-10 21:02:20] 2026-01-10 20:01:31,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,914 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 21:02:20] 2026-01-10 20:01:31,915 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4579.891874999999
[2026-01-10 21:02:20] 2026-01-10 20:01:31,915 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963378610/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,915 | INFO     | extracted standard info from prmon json
[2026-01-10 21:02:20] 2026-01-10 20:01:31,915 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:02:20] 2026-01-10 20:01:31,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:02:20] 2026-01-10 20:01:31,920 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:02:20] 2026-01-10 20:01:31,920 | INFO     | sum of square deviations: 143224125402.0
[2026-01-10 21:02:20] 2026-01-10 20:01:31,925 | INFO     | sum of deviations: 340894443255.99994
[2026-01-10 21:02:20] 2026-01-10 20:01:31,925 | INFO     | mean x: 1768051681.0
[2026-01-10 21:02:20] 2026-01-10 20:01:31,925 | INFO     | mean y: 2012491.5899094436
[2026-01-10 21:02:20] 2026-01-10 20:01:31,925 | INFO     | intersect: -4206210052.975291
[2026-01-10 21:02:20] 2026-01-10 20:01:31,925 | INFO     | chi2: 2.9559841618073044
[2026-01-10 21:02:20] 2026-01-10 20:01:31,926 | INFO     | sum of square deviations: 140462808512.0
[2026-01-10 21:02:20] 2026-01-10 20:01:31,930 | INFO     | sum of deviations: 400698359373.5
[2026-01-10 21:02:20] 2026-01-10 20:01:31,930 | INFO     | mean x: 1768051528.5
[2026-01-10 21:02:20] 2026-01-10 20:01:31,931 | INFO     | mean y: 2015781.9231770833
[2026-01-10 21:02:20] 2026-01-10 20:01:31,931 | INFO     | intersect: -5041706141.786146
[2026-01-10 21:02:20] 2026-01-10 20:01:31,931 | INFO     | chi2: 2.166615974194995
[2026-01-10 21:02:20] 2026-01-10 20:01:31,931 | INFO     | current chi2=2.166615974194995 (change=26.704073648679007 %)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,931 | INFO     | sum of square deviations: 137737213222.0
[2026-01-10 21:02:20] 2026-01-10 20:01:31,936 | INFO     | sum of deviations: 395698070758.9997
[2026-01-10 21:02:20] 2026-01-10 20:01:31,936 | INFO     | mean x: 1768051376.0
[2026-01-10 21:02:20] 2026-01-10 20:01:31,936 | INFO     | mean y: 2015502.141546527
[2026-01-10 21:02:20] 2026-01-10 20:01:31,936 | INFO     | intersect: -5077327270.376878
[2026-01-10 21:02:20] 2026-01-10 20:01:31,936 | INFO     | chi2: 2.1664809902333904
[2026-01-10 21:02:20] 2026-01-10 20:01:31,936 | INFO     | current chi2=2.1664809902333904 (change=0.006230174761582791 %)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,937 | INFO     | right removable region: 762
[2026-01-10 21:02:20] 2026-01-10 20:01:31,937 | INFO     | sum of square deviations: 140462808512.0
[2026-01-10 21:02:20] 2026-01-10 20:01:31,942 | INFO     | sum of deviations: 202920045014.99994
[2026-01-10 21:02:20] 2026-01-10 20:01:31,942 | INFO     | mean x: 1768051833.5
[2026-01-10 21:02:20] 2026-01-10 20:01:31,942 | INFO     | mean y: 2020103.2552083333
[2026-01-10 21:02:20] 2026-01-10 20:01:31,942 | INFO     | intersect: -2552201625.922466
[2026-01-10 21:02:20] 2026-01-10 20:01:31,942 | INFO     | chi2: 1.0624977944366567
[2026-01-10 21:02:20] 2026-01-10 20:01:31,942 | INFO     | current chi2=1.0624977944366567 (change=64.0560389949099 %)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,942 | INFO     | sum of square deviations: 137737213222.0
[2026-01-10 21:02:20] 2026-01-10 20:01:31,947 | INFO     | sum of deviations: 174872592287.99994
[2026-01-10 21:02:20] 2026-01-10 20:01:31,947 | INFO     | mean x: 1768051986.0
[2026-01-10 21:02:20] 2026-01-10 20:01:31,947 | INFO     | mean y: 2021667.0969855832
[2026-01-10 21:02:20] 2026-01-10 20:01:31,947 | INFO     | intersect: -2242715443.951101
[2026-01-10 21:02:20] 2026-01-10 20:01:31,948 | INFO     | chi2: 0.8819152376720775
[2026-01-10 21:02:20] 2026-01-10 20:01:31,948 | INFO     | current chi2=0.8819152376720775 (change=16.996040623343156 %)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,948 | INFO     | left removable region: 20
[2026-01-10 21:02:20] 2026-01-10 20:01:31,948 | INFO     | sum of square deviations: 126674544405.5
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | sum of deviations: 203716121336.50012
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | mean x: 1768051955.5
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | mean y: 2026367.5296495957
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | intersect: -2841328533.6957607
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | chi2: 0.07105308938993471
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | current memory leak: 1.61 B/s (using 742 data points, chi2=0.07)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | could have reported an average CPU frequency of 4560 MHz (30 samples)
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | ..............................
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | . Timing measurements:
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | . get job = 0 s
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | . initial setup = 1 s
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | . payload setup = 8 s
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | . stage-in = 0 s
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | . payload execution = 47144 s
[2026-01-10 21:02:20] 2026-01-10 20:01:31,953 | INFO     | . stage-out = 0 s
[2026-01-10 21:02:20] 2026-01-10 20:01:31,954 | INFO     | . log creation = 0 s
[2026-01-10 21:02:20] 2026-01-10 20:01:31,954 | INFO     | ..............................
[2026-01-10 21:02:20] 2026-01-10 20:01:32,347 | INFO     | 
[2026-01-10 21:02:20] 2026-01-10 20:01:32,348 | INFO     | job summary report
[2026-01-10 21:02:20] 2026-01-10 20:01:32,348 | INFO     | --------------------------------------------------
[2026-01-10 21:02:20] 2026-01-10 20:01:32,348 | INFO     | PanDA job id: 6963378610
[2026-01-10 21:02:20] 2026-01-10 20:01:32,348 | INFO     | task id: 47962010
[2026-01-10 21:02:20] 2026-01-10 20:01:32,348 | INFO     | errors: (none)
[2026-01-10 21:02:20] 2026-01-10 20:01:32,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:02:20] 2026-01-10 20:01:32,349 | INFO     | pilot state: finished 
[2026-01-10 21:02:20] 2026-01-10 20:01:32,349 | INFO     | transexitcode: 0
[2026-01-10 21:02:20] 2026-01-10 20:01:32,349 | INFO     | exeerrorcode: 0
[2026-01-10 21:02:20] 2026-01-10 20:01:32,349 | INFO     | exeerrordiag: 
[2026-01-10 21:02:20] 2026-01-10 20:01:32,349 | INFO     | exitcode: 0
[2026-01-10 21:02:20] 2026-01-10 20:01:32,349 | INFO     | exitmsg: OK
[2026-01-10 21:02:20] 2026-01-10 20:01:32,350 | INFO     | cpuconsumptiontime: 93478 s
[2026-01-10 21:02:20] 2026-01-10 20:01:32,350 | INFO     | nevents: 900
[2026-01-10 21:02:20] 2026-01-10 20:01:32,350 | INFO     | neventsw: 0
[2026-01-10 21:02:20] 2026-01-10 20:01:32,350 | INFO     | pid: 1658663
[2026-01-10 21:02:20] 2026-01-10 20:01:32,350 | INFO     | pgrp: 1658663
[2026-01-10 21:02:20] 2026-01-10 20:01:32,350 | INFO     | corecount: 2
[2026-01-10 21:02:20] 2026-01-10 20:01:32,350 | INFO     | event service: False
[2026-01-10 21:02:20] 2026-01-10 20:01:32,351 | INFO     | sizes: {0: 2284625, 2: 2284887, 10: 2284915, 47156: 2332812, 47157: 2332811, 47158: 2341867, 47160: 2342051, 47168: 2342297}
[2026-01-10 21:02:20] 2026-01-10 20:01:32,351 | INFO     | --------------------------------------------------
[2026-01-10 21:02:20] 2026-01-10 20:01:32,351 | INFO     | 
[2026-01-10 21:02:20] 2026-01-10 20:01:32,351 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,364 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:02:20] 2026-01-10 20:01:32,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,365 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:02:20] 2026-01-10 20:01:32,365 | INFO     | job 6963378610 has completed (purged errors)
[2026-01-10 21:02:20] 2026-01-10 20:01:32,365 | INFO     | overall cleanup function is called
[2026-01-10 21:02:20] 2026-01-10 20:01:33,371 | INFO     | --- collectZombieJob: --- 10, [1658663]
[2026-01-10 21:02:20] 2026-01-10 20:01:33,371 | INFO     | zombie collector waiting for pid 1658663
[2026-01-10 21:02:20] 2026-01-10 20:01:33,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:02:20] 2026-01-10 20:01:33,372 | INFO     | collected zombie processes
[2026-01-10 21:02:20] 2026-01-10 20:01:33,372 | INFO     | will attempt to kill all subprocesses of pid=1658663
[2026-01-10 21:02:20] 2026-01-10 20:01:33,411 | INFO     | process IDs to be killed: [1658663] (in reverse order)
[2026-01-10 21:02:20] 2026-01-10 20:01:33,433 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:02:20] 2026-01-10 20:01:33,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:02:20] 2026-01-10 20:01:33,434 | INFO     | did not find any defunct processes belonging to 1658663
[2026-01-10 21:02:20] 2026-01-10 20:01:33,435 | INFO     | did not find any defunct processes belonging to 1658663
[2026-01-10 21:02:20] 2026-01-10 20:01:33,435 | INFO     | ready for new job
[2026-01-10 21:02:20] 2026-01-10 20:01:33,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:02:20] 2026-01-10 20:01:33,436 | INFO     | ***************************************
[2026-01-10 21:02:20] 2026-01-10 20:01:33,436 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:02:20] 2026-01-10 20:01:33,436 | INFO     | ***************************************
[2026-01-10 21:02:20] 2026-01-10 20:01:33,436 | INFO     | 
[2026-01-10 21:02:20] 2026-01-10 20:01:33,436 | INFO     | architecture information:
[2026-01-10 21:02:20] 2026-01-10 20:01:33,436 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:02:20] 2026-01-10 20:01:33,445 | INFO     | cat /etc/os-release:
[2026-01-10 21:02:20] NAME="CentOS Linux"
[2026-01-10 21:02:20] VERSION="7 (Core)"
[2026-01-10 21:02:20] ID="centos"
[2026-01-10 21:02:20] ID_LIKE="rhel fedora"
[2026-01-10 21:02:20] VERSION_ID="7"
[2026-01-10 21:02:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:02:20] ANSI_COLOR="0;31"
[2026-01-10 21:02:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:02:20] HOME_URL="https://www.centos.org/"
[2026-01-10 21:02:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:02:20] 
[2026-01-10 21:02:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:02:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:02:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:02:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:02:20] 
[2026-01-10 21:02:20] 2026-01-10 20:01:33,445 | INFO     | ***************************************
[2026-01-10 21:02:20] 2026-01-10 20:01:33,949 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 21:02:20] 2026-01-10 20:01:33,960 | INFO     | sufficient remaining disk space (235844665344 B)
[2026-01-10 21:02:20] 2026-01-10 20:01:33,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:02:20] 2026-01-10 20:01:33,961 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:02:20] 2026-01-10 20:01:33,961 | INFO     | update_server=False
[2026-01-10 21:02:20] 2026-01-10 20:01:33,961 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:02:20] 2026-01-10 20:01:33,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:02:20] 2026-01-10 20:01:34,090 | INFO     | all data control threads have been joined
[2026-01-10 21:02:20] 2026-01-10 20:01:34,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:02:20] 2026-01-10 20:01:34,344 | INFO     | all payload control threads have been joined
[2026-01-10 21:02:20] 2026-01-10 20:01:34,462 | INFO     | all job control threads have been joined
[2026-01-10 21:02:20] 2026-01-10 20:01:34,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:02:20] 2026-01-10 20:01:34,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:02:20] 2026-01-10 20:01:34,925 | INFO     | aborting loop
[2026-01-10 21:02:20] 2026-01-10 20:01:34,966 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:34,967 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:35,080 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:35,095 | INFO     | [data] control thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:35,168 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:35,350 | INFO     | [payload] control thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:35,468 | INFO     | [job] control thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:35,702 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:35,930 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:36,053 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:36,069 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:36,124 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:36,146 | INFO     | [job] validate thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:36,630 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:38,217 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:01:44,777 | INFO     | job.realtimelogging is not enabled
[2026-01-10 21:02:20] 2026-01-10 20:01:45,782 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:02:20] 2026-01-10 20:02:03,576 | INFO     | PID=1652212 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:02:20] 2026-01-10 20:02:03,576 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:02:20] 2026-01-10 20:02:03,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:02:20] 2026-01-10 20:02:03,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:02:20] 2026-01-10 20:02:13,043 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:02:20] 2026-01-10 20:02:15,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268530136896)>', '<ExcThread(monitor, started 140268019885824)>']
[2026-01-10 21:02:20] 2026-01-10 20:02:15,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:02:20] 2026-01-10 20:02:15,640 | INFO     | [monitor] control thread has ended
[2026-01-10 21:02:20] 2026-01-10 20:02:20,078 | INFO     | all workflow threads have been joined
[2026-01-10 21:02:20] 2026-01-10 20:02:20,079 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:02:20] 2026-01-10 20:02:20,079 | INFO     | traces error code: 0
[2026-01-10 21:02:20] 2026-01-10 20:02:20,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:02:20] 2026-01-10 20:02:20,121 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:02:20] 2026-01-10 20:02:20,124 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:02:20] 2026-01-10 20:02:20,126 [wrapper] pilotpid: 1652212
[2026-01-10 21:02:20] 2026-01-10 20:02:20,128 [wrapper] Pilot exit status: 0
[2026-01-10 21:02:20] 2026-01-10 20:02:20,133 [wrapper] pandaids: 6963378610 6963378610
[2026-01-10 21:02:20] 2026-01-10 20:02:20,146 [wrapper] cleanup supervisor_pilot 1734026 1652213
[2026-01-10 21:02:20] 2026-01-10 20:02:20,148 [wrapper] Test setup, not cleaning
[2026-01-10 21:02:20] 2026-01-10 20:02:20,150 [wrapper] apfmon messages muted
[2026-01-10 21:02:20] 2026-01-10 20:02:20,152 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:02:20] 2026-01-10 20:02:20,154 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:02:20]  *** Error codes and diagnostics ***
[2026-01-10 21:02:20]     "exeErrorCode": 0,
[2026-01-10 21:02:20]     "exeErrorDiag": "",
[2026-01-10 21:02:20]     "pilotErrorCode": 0,
[2026-01-10 21:02:20]     "pilotErrorDiag": "",
[2026-01-10 21:02:20]  *** Listing of results directory ***
[2026-01-10 21:02:20] total 1571348
[2026-01-10 21:02:20] drwx------ 5 boinc boinc      4096 Dec  3 15:30 pilot3
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-10 21:02:20] -rwx------ 1 boinc boinc     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc       100 Jan 10 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:02:20] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 02:56 run_atlas
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc       105 Jan 10 02:56 job.xml
[2026-01-10 21:02:20] -rw-r--r-- 3 boinc boinc 392461642 Jan 10 02:56 EVNT.47962006._000093.pool.root.1
[2026-01-10 21:02:20] -rw-r--r-- 3 boinc boinc 392461642 Jan 10 02:56 ATLAS.root_0
[2026-01-10 21:02:20] -rw-r--r-- 2 boinc boinc    592616 Jan 10 02:56 input.tar.gz
[2026-01-10 21:02:20] -rw-r--r-- 2 boinc boinc     15847 Jan 10 02:56 start_atlas.sh
[2026-01-10 21:02:20] drwxrwx--x 2 boinc boinc      4096 Jan 10 02:56 shared
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc         0 Jan 10 02:56 boinc_setup_complete
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc         0 Jan 10 02:56 boinc_lockfile
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc      6288 Jan 10 07:55 init_data.xml
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc      2892 Jan 10 07:55 pandaJob.out
[2026-01-10 21:02:20] -rw------- 1 boinc boinc    989374 Jan 10 07:55 agis_schedconf.cvmfs.json
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc       533 Jan 10 20:57 boinc_task_state.xml
[2026-01-10 21:02:20] -rw------- 1 boinc boinc 804502955 Jan 10 21:01 HITS.47962010._001156.pool.root.1
[2026-01-10 21:02:20] -rw------- 1 boinc boinc      1037 Jan 10 21:01 memory_monitor_summary.json
[2026-01-10 21:02:20] -rw------- 1 boinc boinc   1516240 Jan 10 21:01 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:02:20] -rw------- 1 boinc boinc   1234788 Jan 10 21:01 log.47962010._001156.job.log.tgz.1
[2026-01-10 21:02:20] -rw------- 1 boinc boinc      8545 Jan 10 21:01 heartbeat.json
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc      8192 Jan 10 21:02 boinc_mmap_file
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc        29 Jan 10 21:02 wrapper_checkpoint.txt
[2026-01-10 21:02:20] -rw------- 1 boinc boinc        96 Jan 10 21:02 pilot_heartbeat.json
[2026-01-10 21:02:20] -rw------- 1 boinc boinc      4824 Jan 10 21:02 pilotlog.txt
[2026-01-10 21:02:20] -rw------- 1 boinc boinc   6622066 Jan 10 21:02 log.47962010._001156.job.log.1
[2026-01-10 21:02:20] -rw------- 1 boinc boinc       353 Jan 10 21:02 output.list
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc       620 Jan 10 21:02 runtime_log
[2026-01-10 21:02:20] -rw------- 1 boinc boinc   7874560 Jan 10 21:02 result.tar.gz
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc      8983 Jan 10 21:02 runtime_log.err
[2026-01-10 21:02:20] -rw------- 1 boinc boinc       790 Jan 10 21:02 DZGKDmHsLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQSmKDmZ7vnDo.diag
[2026-01-10 21:02:20] -rw-r--r-- 1 boinc boinc     23295 Jan 10 21:02 stderr.txt
[2026-01-10 21:02:20] HITS file was successfully produced:
[2026-01-10 21:02:20] -rw------- 1 boinc boinc 804502955 Jan 10 21:01 shared/HITS.pool.root.1
[2026-01-10 21:02:20]  *** Contents of shared directory: ***
[2026-01-10 21:02:20] total 1177208
[2026-01-10 21:02:20] -rw-r--r-- 3 boinc boinc 392461642 Jan 10 02:56 ATLAS.root_0
[2026-01-10 21:02:20] -rw-r--r-- 2 boinc boinc    592616 Jan 10 02:56 input.tar.gz
[2026-01-10 21:02:20] -rw-r--r-- 2 boinc boinc     15847 Jan 10 02:56 start_atlas.sh
[2026-01-10 21:02:20] -rw------- 1 boinc boinc 804502955 Jan 10 21:01 HITS.pool.root.1
[2026-01-10 21:02:20] -rw------- 1 boinc boinc   7874560 Jan 10 21:02 result.tar.gz
21:02:21 (1647995): run_atlas exited; CPU time 93636.727684
21:02:21 (1647995): called boinc_finish(0)

</stderr_txt>
]]>

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