Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:23:07 (966202): wrapper (7.7.26015): starting
05:23:07 (966202): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 05:23:07] Arguments: --nthreads 3
[2026-01-10 05:23:07] Threads: 3
[2026-01-10 05:23:07] Checking for CVMFS
[2026-01-10 05:23:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:23:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:23:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:23:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:23:07] 2.9.2.0 187979 3313 79916 154968 2 56 23574638 36864000 0 130560 0 2011305 99.987 126610 6721 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 05:23:07] CVMFS is ok
[2026-01-10 05:23:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 05:23:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 05:23:07] Further information can be found at the LHC@home message board.
[2026-01-10 05:23:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:23:07] Checking for apptainer binary...
[2026-01-10 05:23:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:23:07] Running /usr/bin/apptainer --version
[2026-01-10 05:23:07] apptainer version 1.4.1-1.1
[2026-01-10 05:23:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:23:07] atlasA223
[2026-01-10 05:23:07] apptainer works
[2026-01-10 05:23:07] Set ATHENA_PROC_NUMBER=3
[2026-01-10 05:23:07] Set ATHENA_CORE_NUMBER=3
[2026-01-10 05:23:07] Starting ATLAS job with PandaID=6963168721
[2026-01-10 05:23:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:19:27]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:19:27] 2026-01-10 06:18:34,586 | INFO     | all job control threads have been joined
[2026-01-10 07:19:27] 2026-01-10 06:18:34,898 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:34,900 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:34,963 | INFO     | all payload control threads have been joined
[2026-01-10 07:19:27] 2026-01-10 06:18:34,982 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,031 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,268 | INFO     | [data] control thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,543 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,592 | INFO     | [job] control thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,658 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,769 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,848 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,902 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:35,968 | INFO     | [payload] control thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:36,189 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:36,297 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:36,358 | INFO     | [job] validate thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:18:37,903 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:19:27] 2026-01-10 06:19:03,495 | INFO     | PID=969926 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 07:19:27] 2026-01-10 06:19:03,495 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:19:27] 2026-01-10 06:19:03,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:19:27] 2026-01-10 06:19:03,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:19:27] 2026-01-10 06:19:20,926 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:19:27] 2026-01-10 06:19:22,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140376877852480)>', '<ExcThread(monitor, started 140376604120832)>']
[2026-01-10 07:19:27] 2026-01-10 06:19:23,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:19:27] 2026-01-10 06:19:23,597 | INFO     | [monitor] control thread has ended
[2026-01-10 07:19:27] 2026-01-10 06:19:27,787 | INFO     | all workflow threads have been joined
[2026-01-10 07:19:27] 2026-01-10 06:19:27,787 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:19:27] 2026-01-10 06:19:27,787 | INFO     | traces error code: 0
[2026-01-10 07:19:27] 2026-01-10 06:19:27,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:19:27] 2026-01-10 06:19:27,837 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:19:27] 2026-01-10 06:19:27,839 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:19:27] 2026-01-10 06:19:27,841 [wrapper] pilotpid: 969926
[2026-01-10 07:19:27] 2026-01-10 06:19:27,844 [wrapper] Pilot exit status: 0
[2026-01-10 07:19:27] 2026-01-10 06:19:27,851 [wrapper] pandaids: 6963168721
[2026-01-10 07:19:27] 2026-01-10 06:19:27,869 [wrapper] cleanup supervisor_pilot  990810 969927
[2026-01-10 07:19:27] 2026-01-10 06:19:27,871 [wrapper] Test setup, not cleaning
[2026-01-10 07:19:27] 2026-01-10 06:19:27,873 [wrapper] apfmon messages muted
[2026-01-10 07:19:27] 2026-01-10 06:19:27,876 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:19:27] 2026-01-10 06:19:27,878 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:19:27]  *** Error codes and diagnostics ***
[2026-01-10 07:19:27]     "exeErrorCode": 0,
[2026-01-10 07:19:27]     "exeErrorDiag": "",
[2026-01-10 07:19:27]     "pilotErrorCode": 0,
[2026-01-10 07:19:27]     "pilotErrorDiag": "",
[2026-01-10 07:19:27]  *** Listing of results directory ***
[2026-01-10 07:19:27] total 436776
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 07:19:27] -rwx------ 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:01 queuedata.json
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc       100 Jan 10 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:19:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 05:23 run_atlas
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc       105 Jan 10 05:23 job.xml
[2026-01-10 07:19:27] -rw-r--r-- 2 boinc boinc 223279536 Jan 10 05:23 EVNT.47898824._001388.pool.root.1
[2026-01-10 07:19:27] drwxrwx--x 2 boinc boinc      4096 Jan 10 05:23 shared
[2026-01-10 07:19:27] -rw-r--r-- 2 boinc boinc    592402 Jan 10 05:23 input.tar.gz
[2026-01-10 07:19:27] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:23 start_atlas.sh
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc         0 Jan 10 05:23 boinc_setup_complete
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc      6446 Jan 10 05:23 init_data.xml
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc         0 Jan 10 05:23 boinc_lockfile
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc      2520 Jan 10 05:23 pandaJob.out
[2026-01-10 07:19:27] -rw------- 1 boinc boinc    989374 Jan 10 05:23 agis_schedconf.cvmfs.json
[2026-01-10 07:19:27] -rw------- 1 boinc boinc   1516240 Jan 10 05:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:19:27] drwx------ 5 boinc boinc      4096 Jan 10 05:23 pilot3
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc       529 Jan 10 07:18 boinc_task_state.xml
[2026-01-10 07:19:27] -rw------- 1 boinc boinc 217497280 Jan 10 07:18 HITS.47898826._036248.pool.root.1
[2026-01-10 07:19:27] -rw------- 1 boinc boinc      1014 Jan 10 07:18 memory_monitor_summary.json
[2026-01-10 07:19:27] -rw------- 1 boinc boinc    297215 Jan 10 07:18 log.47898826._036248.job.log.tgz.1
[2026-01-10 07:19:27] -rw------- 1 boinc boinc      7753 Jan 10 07:18 heartbeat.json
[2026-01-10 07:19:27] -rw------- 1 boinc boinc        95 Jan 10 07:19 pilot_heartbeat.json
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc      8192 Jan 10 07:19 boinc_mmap_file
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc        27 Jan 10 07:19 wrapper_checkpoint.txt
[2026-01-10 07:19:27] -rw------- 1 boinc boinc      5273 Jan 10 07:19 pilotlog.txt
[2026-01-10 07:19:27] -rw------- 1 boinc boinc    995428 Jan 10 07:19 log.47898826._036248.job.log.1
[2026-01-10 07:19:27] -rw------- 1 boinc boinc       357 Jan 10 07:19 output.list
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc       620 Jan 10 07:19 runtime_log
[2026-01-10 07:19:27] -rw------- 1 boinc boinc   1310720 Jan 10 07:19 result.tar.gz
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc      8912 Jan 10 07:19 runtime_log.err
[2026-01-10 07:19:27] -rw------- 1 boinc boinc       662 Jan 10 07:19 Xp2NDmB0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTtlKDmcrPA1n.diag
[2026-01-10 07:19:27] -rw-r--r-- 1 boinc boinc      6501 Jan 10 07:19 stderr.txt
[2026-01-10 07:19:27] HITS file was successfully produced:
[2026-01-10 07:19:27] -rw------- 1 boinc boinc 217497280 Jan 10 07:18 shared/HITS.pool.root.1
[2026-01-10 07:19:27]  *** Contents of shared directory: ***
[2026-01-10 07:19:27] total 432332
[2026-01-10 07:19:27] -rw-r--r-- 2 boinc boinc 223279536 Jan 10 05:23 ATLAS.root_0
[2026-01-10 07:19:27] -rw-r--r-- 2 boinc boinc    592402 Jan 10 05:23 input.tar.gz
[2026-01-10 07:19:27] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:23 start_atlas.sh
[2026-01-10 07:19:27] -rw------- 1 boinc boinc 217497280 Jan 10 07:18 HITS.pool.root.1
[2026-01-10 07:19:27] -rw------- 1 boinc boinc   1310720 Jan 10 07:19 result.tar.gz
07:19:29 (966202): run_atlas exited; CPU time 19961.527274
07:19:29 (966202): called boinc_finish(0)

</stderr_txt>
]]>

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