Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:56:25 (5157): wrapper (7.7.26015): starting
18:56:25 (5157): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:56:25] Arguments: --nthreads 8
[2026-01-09 18:56:25] Threads: 8
[2026-01-09 18:56:25] Checking for CVMFS
[2026-01-09 18:56:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:56:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:56:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:56:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:56:25] 2.11.2.0 22482 35726 96052 154951 2 57 20662296 25165824 0 130560 0 15788112 99.834 9775445 3878 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 18:56:25] CVMFS is ok
[2026-01-09 18:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:56:25] Checking for apptainer binary...
[2026-01-09 18:56:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:56:25] Running /usr/bin/apptainer --version
[2026-01-09 18:56:26] apptainer version 1.3.2-1.el7
[2026-01-09 18:56:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:56:27] cg-vwn445.simple-grid.lan
[2026-01-09 18:56:27] apptainer works
[2026-01-09 18:56:27] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:56:27] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:56:27] Starting ATLAS job with PandaID=6963375886
[2026-01-09 18:56:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:02:22]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:02:22] 2026-01-10 15:01:32,287 | INFO     | time since job start (75888s) is within the limit (349056.0s)
[2026-01-10 16:02:22] 2026-01-10 15:01:34,294 | INFO     | time since job start (75890s) is within the limit (349056.0s)
[2026-01-10 16:02:22] 2026-01-10 15:01:34,655 | INFO     | monitor loop #5072: job 0:6963375886 is in state 'finished'
[2026-01-10 16:02:22] 2026-01-10 15:01:34,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:02:22] 2026-01-10 15:01:36,301 | INFO     | time since job start (75892s) is within the limit (349056.0s)
[2026-01-10 16:02:22] 2026-01-10 15:01:37,160 | INFO     | monitor loop #5073: job 0:6963375886 is in state 'finished'
[2026-01-10 16:02:22] 2026-01-10 15:01:37,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:02:22] 2026-01-10 15:01:38,308 | INFO     | time since job start (75894s) is within the limit (349056.0s)
[2026-01-10 16:02:22] 2026-01-10 15:01:39,668 | INFO     | monitor loop #5074: job 0:6963375886 is in state 'finished'
[2026-01-10 16:02:22] 2026-01-10 15:01:39,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:02:22] 2026-01-10 15:01:40,315 | INFO     | time since job start (75896s) is within the limit (349056.0s)
[2026-01-10 16:02:22] 2026-01-10 15:01:42,184 | INFO     | monitor loop #5075: job 0:6963375886 is in state 'finished'
[2026-01-10 16:02:22] 2026-01-10 15:01:42,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:02:22] 2026-01-10 15:01:42,321 | INFO     | time since job start (75898s) is within the limit (349056.0s)
[2026-01-10 16:02:22] 2026-01-10 15:01:44,329 | INFO     | time since job start (75900s) is within the limit (349056.0s)
[2026-01-10 16:02:22] 2026-01-10 15:01:44,441 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 16:02:22] 2026-01-10 15:01:44,442 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 16:02:22] 2026-01-10 15:01:44,444 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963375886/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:02:22] 2026-01-10 15:01:44,445 | INFO     | extracted standard info from prmon json
[2026-01-10 16:02:22] 2026-01-10 15:01:44,445 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:02:22] 2026-01-10 15:01:44,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:02:22] 2026-01-10 15:01:44,476 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:02:22] 2026-01-10 15:01:44,478 | INFO     | sum of square deviations: 594086784073.9784
[2026-01-10 16:02:22] 2026-01-10 15:01:44,539 | INFO     | sum of deviations: 629696250594.9435
[2026-01-10 16:02:22] 2026-01-10 15:01:44,539 | INFO     | mean x: 1768019292.4275362
[2026-01-10 16:02:22] 2026-01-10 15:01:44,540 | INFO     | mean y: 2857730.1714975843
[2026-01-10 16:02:22] 2026-01-10 15:01:44,540 | INFO     | intersect: -1871136354.9797206
[2026-01-10 16:02:22] 2026-01-10 15:01:44,541 | INFO     | chi2: 18.155805817379076
[2026-01-10 16:02:22] 2026-01-10 15:01:44,543 | INFO     | sum of square deviations: 586941131677.1599
[2026-01-10 16:02:22] 2026-01-10 15:01:44,604 | INFO     | sum of deviations: 1044225566968.5807
[2026-01-10 16:02:22] 2026-01-10 15:01:44,605 | INFO     | mean x: 1768019139.9312854
[2026-01-10 16:02:22] 2026-01-10 15:01:44,605 | INFO     | mean y: 2866575.912691997
[2026-01-10 16:02:22] 2026-01-10 15:01:44,605 | INFO     | intersect: -3142612057.5757775
[2026-01-10 16:02:22] 2026-01-10 15:01:44,607 | INFO     | chi2: 14.845888075639463
[2026-01-10 16:02:22] 2026-01-10 15:01:44,607 | INFO     | current chi2=14.845888075639463 (change=18.230629777783243 %)
[2026-01-10 16:02:22] 2026-01-10 15:01:44,607 | INFO     | right removable region: 1236
[2026-01-10 16:02:22] 2026-01-10 15:01:44,609 | INFO     | sum of square deviations: 586940428957.1594
[2026-01-10 16:02:22] 2026-01-10 15:01:44,683 | INFO     | sum of deviations: 262643467603.22305
[2026-01-10 16:02:22] 2026-01-10 15:01:44,683 | INFO     | mean x: 1768019444.9312854
[2026-01-10 16:02:22] 2026-01-10 15:01:44,683 | INFO     | mean y: 2865558.402586904
[2026-01-10 16:02:22] 2026-01-10 15:01:44,684 | INFO     | intersect: -788285868.381428
[2026-01-10 16:02:22] 2026-01-10 15:01:44,685 | INFO     | chi2: 15.820847905091691
[2026-01-10 16:02:22] 2026-01-10 15:01:44,685 | INFO     | current chi2=15.820847905091691 (change=12.860668018669374 %)
[2026-01-10 16:02:22] 2026-01-10 15:01:44,686 | INFO     | left removable region: 10
[2026-01-10 16:02:22] 2026-01-10 15:01:44,687 | INFO     | sum of square deviations: 571421640165.7881
[2026-01-10 16:02:22] 2026-01-10 15:01:44,704 | INFO     | monitor loop #5076: job 0:6963375886 is in state 'finished'
[2026-01-10 16:02:22] 2026-01-10 15:01:44,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:02:22] 2026-01-10 15:01:44,743 | INFO     | sum of deviations: 694041329347.9402
[2026-01-10 16:02:22] 2026-01-10 15:01:44,743 | INFO     | mean x: 1768019414.4380097
[2026-01-10 16:02:22] 2026-01-10 15:01:44,744 | INFO     | mean y: 2878204.4004893964
[2026-01-10 16:02:22] 2026-01-10 15:01:44,744 | INFO     | intersect: -2144535296.3439126
[2026-01-10 16:02:22] 2026-01-10 15:01:44,745 | INFO     | chi2: 11.59337215070909
[2026-01-10 16:02:22] 2026-01-10 15:01:44,746 | INFO     | current memory leak: 1.21 B/s (using 1226 data points, chi2=11.59)
[2026-01-10 16:02:22] 2026-01-10 15:01:44,747 | INFO     | could have reported an average CPU frequency of 1999 MHz (42 samples)
[2026-01-10 16:02:22] 2026-01-10 15:01:44,747 | INFO     | ..............................
[2026-01-10 16:02:22] 2026-01-10 15:01:44,747 | INFO     | . Timing measurements:
[2026-01-10 16:02:22] 2026-01-10 15:01:44,747 | INFO     | . get job = 0 s
[2026-01-10 16:02:22] 2026-01-10 15:01:44,748 | INFO     | . initial setup = 2 s
[2026-01-10 16:02:22] 2026-01-10 15:01:44,748 | INFO     | . payload setup = 9 s
[2026-01-10 16:02:22] 2026-01-10 15:01:44,748 | INFO     | . stage-in = 0 s
[2026-01-10 16:02:22] 2026-01-10 15:01:44,748 | INFO     | . payload execution = 75757 s
[2026-01-10 16:02:22] 2026-01-10 15:01:44,748 | INFO     | . stage-out = 5 s
[2026-01-10 16:02:22] 2026-01-10 15:01:44,748 | INFO     | . log creation = 2 s
[2026-01-10 16:02:22] 2026-01-10 15:01:44,748 | INFO     | ..............................
[2026-01-10 16:02:22] 2026-01-10 15:01:45,087 | INFO     | 
[2026-01-10 16:02:22] 2026-01-10 15:01:45,087 | INFO     | job summary report
[2026-01-10 16:02:22] 2026-01-10 15:01:45,087 | INFO     | --------------------------------------------------
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | PanDA job id: 6963375886
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | task id: 47962010
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | errors: (none)
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | pilot state: finished 
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | transexitcode: 0
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | exeerrorcode: 0
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | exeerrordiag: 
[2026-01-10 16:02:22] 2026-01-10 15:01:45,088 | INFO     | exitcode: 0
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | exitmsg: OK
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | cpuconsumptiontime: 354450 s
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | nevents: 900
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | neventsw: 0
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | pid: 15294
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | pgrp: 15294
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | corecount: 8
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | event service: False
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | sizes: {0: 2284452, 1: 2284651, 7: 2284913, 12: 2284941, 75770: 2341870, 75771: 2341869, 75776: 2351049, 75779: 2351105, 75883: 2351351}
[2026-01-10 16:02:22] 2026-01-10 15:01:45,089 | INFO     | --------------------------------------------------
[2026-01-10 16:02:22] 2026-01-10 15:01:45,090 | INFO     | 
[2026-01-10 16:02:22] 2026-01-10 15:01:45,090 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-10 16:02:22] 2026-01-10 15:01:45,712 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,713 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,713 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,713 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,715 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:02:22] 2026-01-10 15:01:45,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,715 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:02:22] 2026-01-10 15:01:45,715 | INFO     | job 6963375886 has completed (purged errors)
[2026-01-10 16:02:22] 2026-01-10 15:01:45,715 | INFO     | overall cleanup function is called
[2026-01-10 16:02:22] 2026-01-10 15:01:46,739 | INFO     | --- collectZombieJob: --- 10, [15294]
[2026-01-10 16:02:22] 2026-01-10 15:01:46,739 | INFO     | zombie collector waiting for pid 15294
[2026-01-10 16:02:22] 2026-01-10 15:01:46,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:02:22] 2026-01-10 15:01:46,740 | INFO     | collected zombie processes
[2026-01-10 16:02:22] 2026-01-10 15:01:46,740 | INFO     | will attempt to kill all subprocesses of pid=15294
[2026-01-10 16:02:22] 2026-01-10 15:01:46,840 | INFO     | process IDs to be killed: [15294] (in reverse order)
[2026-01-10 16:02:22] 2026-01-10 15:01:47,715 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:02:22] 2026-01-10 15:01:47,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:02:22] 2026-01-10 15:01:47,718 | INFO     | did not find any defunct processes belonging to 15294
[2026-01-10 16:02:22] 2026-01-10 15:01:47,719 | INFO     | did not find any defunct processes belonging to 15294
[2026-01-10 16:02:22] 2026-01-10 15:01:47,720 | INFO     | ready for new job
[2026-01-10 16:02:22] 2026-01-10 15:01:47,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:02:22] 2026-01-10 15:01:47,729 | INFO     | ***************************************
[2026-01-10 16:02:22] 2026-01-10 15:01:47,730 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:02:22] 2026-01-10 15:01:47,730 | INFO     | ***************************************
[2026-01-10 16:02:22] 2026-01-10 15:01:47,730 | INFO     | 
[2026-01-10 16:02:22] 2026-01-10 15:01:47,730 | INFO     | pilot is running in a VM
[2026-01-10 16:02:22] 2026-01-10 15:01:47,731 | INFO     | architecture information:
[2026-01-10 16:02:22] 2026-01-10 15:01:47,736 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:02:22] 2026-01-10 15:01:47,904 | INFO     | cat /etc/os-release:
[2026-01-10 16:02:22] NAME="CentOS Linux"
[2026-01-10 16:02:22] VERSION="7 (Core)"
[2026-01-10 16:02:22] ID="centos"
[2026-01-10 16:02:22] ID_LIKE="rhel fedora"
[2026-01-10 16:02:22] VERSION_ID="7"
[2026-01-10 16:02:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:02:22] ANSI_COLOR="0;31"
[2026-01-10 16:02:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:02:22] HOME_URL="https://www.centos.org/"
[2026-01-10 16:02:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:02:22] 
[2026-01-10 16:02:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:02:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:02:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:02:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:02:22] 
[2026-01-10 16:02:22] 2026-01-10 15:01:47,904 | INFO     | ***************************************
[2026-01-10 16:02:22] 2026-01-10 15:01:48,407 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-10 16:02:22] 2026-01-10 15:01:48,602 | INFO     | sufficient remaining disk space (495544434688 B)
[2026-01-10 16:02:22] 2026-01-10 15:01:48,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:02:22] 2026-01-10 15:01:48,602 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:02:22] 2026-01-10 15:01:48,602 | INFO     | update_server=False
[2026-01-10 16:02:22] 2026-01-10 15:01:48,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:02:22] 2026-01-10 15:01:48,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:02:22] 2026-01-10 15:01:48,603 | INFO     | aborting loop
[2026-01-10 16:02:22] 2026-01-10 15:01:49,125 | INFO     | all job control threads have been joined
[2026-01-10 16:02:22] 2026-01-10 15:01:49,466 | INFO     | all payload control threads have been joined
[2026-01-10 16:02:22] 2026-01-10 15:01:49,608 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:02:22] 2026-01-10 15:01:49,609 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:49,611 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:49,680 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:49,706 | INFO     | all data control threads have been joined
[2026-01-10 16:02:22] 2026-01-10 15:01:49,847 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:49,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:02:22] 2026-01-10 15:01:50,085 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,131 | INFO     | [job] control thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,143 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,281 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,396 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,431 | INFO     | [job] validate thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,472 | INFO     | [payload] control thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,712 | INFO     | [data] control thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,810 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:50,917 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:51,615 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:51,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:02:22] 2026-01-10 15:01:55,554 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:02:22] 2026-01-10 15:01:55,669 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:02:22] 2026-01-10 15:01:57,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140089315514176)>', '<ExcThread(monitor, started 140088738572032)>']
[2026-01-10 16:02:22] 2026-01-10 15:02:02,558 | INFO     | all workflow threads have been joined
[2026-01-10 16:02:22] 2026-01-10 15:02:02,558 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:02:22] 2026-01-10 15:02:02,559 | INFO     | traces error code: 0
[2026-01-10 16:02:22] 2026-01-10 15:02:02,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:02:22] 2026-01-10 15:02:17,478 | INFO     | PID=8871 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 16:02:22] 2026-01-10 15:02:17,478 | INFO     | .. there are 2 such processes running
[2026-01-10 16:02:22] 2026-01-10 15:02:17,479 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:02:22] 2026-01-10 15:02:17,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:02:22] 2026-01-10 15:02:17,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:02:22] 2026-01-10 15:02:17,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:02:22] 2026-01-10 15:02:17,479 | INFO     | [monitor] control thread has ended
[2026-01-10 16:02:22] 2026-01-10 15:02:17,941 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:02:22] 2026-01-10 15:02:18,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:02:22] 2026-01-10 15:02:18,169 [wrapper] pilotpid: 8871
[2026-01-10 16:02:22] 2026-01-10 15:02:18,272 [wrapper] Pilot exit status: 0
[2026-01-10 16:02:22] 2026-01-10 15:02:18,622 [wrapper] pandaids: 6963375886
[2026-01-10 16:02:22] 2026-01-10 15:02:19,068 [wrapper] cleanup supervisor_pilot 24861 8872
[2026-01-10 16:02:22] 2026-01-10 15:02:19,179 [wrapper] Test setup, not cleaning
[2026-01-10 16:02:22] 2026-01-10 15:02:19,275 [wrapper] apfmon messages muted
[2026-01-10 16:02:22] 2026-01-10 15:02:19,368 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:02:22] 2026-01-10 15:02:19,461 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:02:22]  *** Error codes and diagnostics ***
[2026-01-10 16:02:22]     "exeErrorCode": 0,
[2026-01-10 16:02:22]     "exeErrorDiag": "",
[2026-01-10 16:02:22]     "pilotErrorCode": 0,
[2026-01-10 16:02:22]     "pilotErrorDiag": "",
[2026-01-10 16:02:22]  *** Listing of results directory ***
[2026-01-10 16:02:22] total 1191748
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-10 16:02:22] -rwx------. 1 boinc boinc     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc       100 Jan  9 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:02:22] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 18:56 run_atlas
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc       105 Jan  9 18:56 job.xml
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc      6391 Jan  9 18:56 init_data.xml
[2026-01-10 16:02:22] -rw-r--r--. 2 boinc boinc 393450499 Jan  9 18:56 EVNT.47962006._000083.pool.root.1
[2026-01-10 16:02:22] -rw-r--r--. 2 boinc boinc     15847 Jan  9 18:56 start_atlas.sh
[2026-01-10 16:02:22] drwxrwx--x. 2 boinc boinc        68 Jan  9 18:56 shared
[2026-01-10 16:02:22] -rw-r--r--. 2 boinc boinc    592608 Jan  9 18:56 input.tar.gz
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc         0 Jan  9 18:56 boinc_lockfile
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc      2892 Jan  9 18:56 pandaJob.out
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc    989356 Jan  9 18:56 agis_schedconf.cvmfs.json
[2026-01-10 16:02:22] drwx------. 5 boinc boinc      4096 Jan  9 18:56 pilot3
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc       533 Jan 10 15:31 boinc_task_state.xml
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc 798173098 Jan 10 15:58 HITS.47962010._001047.pool.root.1
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc      1032 Jan 10 15:59 memory_monitor_summary.json
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc   1516240 Jan 10 15:59 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc   2317323 Jan 10 15:59 log.47962010._001047.job.log.tgz.1
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc        95 Jan 10 16:01 pilot_heartbeat.json
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc      8612 Jan 10 16:01 heartbeat.json
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc       819 Jan 10 16:02 pilotlog.txt
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc        29 Jan 10 16:02 wrapper_checkpoint.txt
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc  10098265 Jan 10 16:02 log.47962010._001047.job.log.1
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc      8192 Jan 10 16:02 boinc_mmap_file
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc       353 Jan 10 16:02 output.list
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc       620 Jan 10 16:02 runtime_log
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc  12431360 Jan 10 16:02 result.tar.gz
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc      8833 Jan 10 16:02 runtime_log.err
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc       661 Jan 10 16:02 q7RLDmGsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpGhKDmX8uQTm.diag
[2026-01-10 16:02:22] -rw-r--r--. 1 boinc boinc     21307 Jan 10 16:02 stderr.txt
[2026-01-10 16:02:22] HITS file was successfully produced:
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc 798173098 Jan 10 15:58 shared/HITS.pool.root.1
[2026-01-10 16:02:22]  *** Contents of shared directory: ***
[2026-01-10 16:02:22] total 1176436
[2026-01-10 16:02:22] -rw-r--r--. 2 boinc boinc 393450499 Jan  9 18:56 ATLAS.root_0
[2026-01-10 16:02:22] -rw-r--r--. 2 boinc boinc     15847 Jan  9 18:56 start_atlas.sh
[2026-01-10 16:02:22] -rw-r--r--. 2 boinc boinc    592608 Jan  9 18:56 input.tar.gz
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc 798173098 Jan 10 15:58 HITS.pool.root.1
[2026-01-10 16:02:22] -rw-------. 1 boinc boinc  12431360 Jan 10 16:02 result.tar.gz
16:02:24 (5157): run_atlas exited; CPU time 354700.703385
16:02:24 (5157): called boinc_finish(0)

</stderr_txt>
]]>

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