Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:18:20 (90384): wrapper (7.7.26015): starting
10:18:20 (90384): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:18:20] Arguments: --nthreads 8
[2026-01-09 10:18:20] Threads: 8
[2026-01-09 10:18:20] Checking for CVMFS
[2026-01-09 10:18:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:18:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:18:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:18:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:18:21] 2.13.3.0 11754 93535 214132 154948 2 90 19339017 32935936 21798 16776704 0 486349981 99.517 637544084 17670 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 10:18:21] CVMFS is ok
[2026-01-09 10:18:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:18:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:18:21] Further information can be found at the LHC@home message board.
[2026-01-09 10:18:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:18:21] Checking for apptainer binary...
[2026-01-09 10:18:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:18:21] Running /usr/bin/apptainer --version
[2026-01-09 10:18:21] apptainer version 1.4.5-2.el9
[2026-01-09 10:18:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:18:22] c7-2-38.aglt2.org
[2026-01-09 10:18:22] apptainer works
[2026-01-09 10:18:22] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:18:22] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:18:22] Starting ATLAS job with PandaID=6963375884
[2026-01-09 10:18:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:48:13]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:48:13] 2026-01-10 22:47:07,400 | INFO     | time since job start (113292s) is within the limit (349056.0s)
[2026-01-10 17:48:13] 2026-01-10 22:47:08,785 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 17:48:13] 2026-01-10 22:47:08,797 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3379.7906145833335
[2026-01-10 17:48:13] 2026-01-10 22:47:08,810 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963375884/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:48:13] 2026-01-10 22:47:08,811 | INFO     | extracted standard info from prmon json
[2026-01-10 17:48:13] 2026-01-10 22:47:08,811 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:48:13] 2026-01-10 22:47:08,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:48:13] 2026-01-10 22:47:08,833 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:48:13] 2026-01-10 22:47:08,835 | INFO     | sum of square deviations: 1982473620802.0625
[2026-01-10 17:48:13] 2026-01-10 22:47:08,888 | INFO     | sum of deviations: 7923909135941.392
[2026-01-10 17:48:13] 2026-01-10 22:47:08,889 | INFO     | mean x: 1768028592.1573277
[2026-01-10 17:48:13] 2026-01-10 22:47:08,889 | INFO     | mean y: 2912054.6767241377
[2026-01-10 17:48:13] 2026-01-10 22:47:08,889 | INFO     | intersect: -7063864404.287229
[2026-01-10 17:48:13] 2026-01-10 22:47:08,890 | INFO     | chi2: 7.639232730056588
[2026-01-10 17:48:13] 2026-01-10 22:47:08,892 | INFO     | sum of square deviations: 1966494790969.8948
[2026-01-10 17:48:13] 2026-01-10 22:47:08,944 | INFO     | sum of deviations: 8441304579535.739
[2026-01-10 17:48:13] 2026-01-10 22:47:08,944 | INFO     | mean x: 1768028439.6591032
[2026-01-10 17:48:13] 2026-01-10 22:47:08,945 | INFO     | mean y: 2916991.0297136684
[2026-01-10 17:48:13] 2026-01-10 22:47:08,945 | INFO     | intersect: -7586458090.448596
[2026-01-10 17:48:13] 2026-01-10 22:47:08,946 | INFO     | chi2: 5.269995870460665
[2026-01-10 17:48:13] 2026-01-10 22:47:08,946 | INFO     | current chi2=5.269995870460665 (change=31.014068340582853 %)
[2026-01-10 17:48:13] 2026-01-10 22:47:08,948 | INFO     | sum of square deviations: 1950602055775.216
[2026-01-10 17:48:13] 2026-01-10 22:47:09,003 | INFO     | sum of deviations: 8764492600862.203
[2026-01-10 17:48:13] 2026-01-10 22:47:09,003 | INFO     | mean x: 1768028287.1608884
[2026-01-10 17:48:13] 2026-01-10 22:47:09,003 | INFO     | mean y: 2920092.1776814735
[2026-01-10 17:48:13] 2026-01-10 22:47:09,003 | INFO     | intersect: -7941227610.864828
[2026-01-10 17:48:13] 2026-01-10 22:47:09,004 | INFO     | chi2: 4.300340066340584
[2026-01-10 17:48:13] 2026-01-10 22:47:09,004 | INFO     | current chi2=4.300340066340584 (change=18.399555292921335 %)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,005 | INFO     | right removable region: 1845
[2026-01-10 17:48:13] 2026-01-10 22:47:09,006 | INFO     | sum of square deviations: 1966494046769.8938
[2026-01-10 17:48:13] 2026-01-10 22:47:09,081 | INFO     | sum of deviations: 7270083910074.194
[2026-01-10 17:48:13] 2026-01-10 22:47:09,081 | INFO     | mean x: 1768028744.6591032
[2026-01-10 17:48:13] 2026-01-10 22:47:09,081 | INFO     | mean y: 2918292.5613182066
[2026-01-10 17:48:13] 2026-01-10 22:47:09,081 | INFO     | intersect: -6533443894.85947
[2026-01-10 17:48:13] 2026-01-10 22:47:09,083 | INFO     | chi2: 4.468235648166616
[2026-01-10 17:48:13] 2026-01-10 22:47:09,083 | INFO     | current chi2=4.468235648166616 (change=41.50936610968367 %)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,084 | INFO     | sum of square deviations: 1950600793075.8606
[2026-01-10 17:48:13] 2026-01-10 22:47:09,138 | INFO     | sum of deviations: 7160607812627.762
[2026-01-10 17:48:13] 2026-01-10 22:47:09,138 | INFO     | mean x: 1768028897.159805
[2026-01-10 17:48:13] 2026-01-10 22:47:09,138 | INFO     | mean y: 2919342.783856988
[2026-01-10 17:48:13] 2026-01-10 22:47:09,138 | INFO     | intersect: -6487471504.433327
[2026-01-10 17:48:13] 2026-01-10 22:47:09,139 | INFO     | chi2: 4.446889765317164
[2026-01-10 17:48:13] 2026-01-10 22:47:09,140 | INFO     | current chi2=4.446889765317164 (change=0.4777250917419925 %)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,140 | INFO     | left removable region: 20
[2026-01-10 17:48:13] 2026-01-10 22:47:09,141 | INFO     | sum of square deviations: 1884785058428.109
[2026-01-10 17:48:13] 2026-01-10 22:47:09,194 | INFO     | sum of deviations: 7952441292513.383
[2026-01-10 17:48:13] 2026-01-10 22:47:09,194 | INFO     | mean x: 1768028866.6657534
[2026-01-10 17:48:13] 2026-01-10 22:47:09,194 | INFO     | mean y: 2929199.815342466
[2026-01-10 17:48:13] 2026-01-10 22:47:09,194 | INFO     | intersect: -7456884693.952677
[2026-01-10 17:48:13] 2026-01-10 22:47:09,195 | INFO     | chi2: 0.8914869670734143
[2026-01-10 17:48:13] 2026-01-10 22:47:09,195 | INFO     | current memory leak: 4.22 B/s (using 1825 data points, chi2=0.89)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | could have reported an average CPU frequency of 3316 MHz (66 samples)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | ..............................
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | . Timing measurements:
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | . get job = 0 s
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | . initial setup = 3 s
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | . payload setup = 25 s
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | . stage-in = 0 s
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | . payload execution = 113222 s
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | . stage-out = 2 s
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | . log creation = 0 s
[2026-01-10 17:48:13] 2026-01-10 22:47:09,197 | INFO     | ..............................
[2026-01-10 17:48:13] 2026-01-10 22:47:09,411 | INFO     | time since job start (113294s) is within the limit (349056.0s)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,556 | INFO     | 
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | job summary report
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | --------------------------------------------------
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | PanDA job id: 6963375884
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | task id: 47962010
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | errors: (none)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | pilot state: finished 
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | transexitcode: 0
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | exeerrorcode: 0
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | exeerrordiag: 
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | exitcode: 0
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | exitmsg: OK
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | cpuconsumptiontime: 209552 s
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | nevents: 900
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | neventsw: 0
[2026-01-10 17:48:13] 2026-01-10 22:47:09,557 | INFO     | pid: 103943
[2026-01-10 17:48:13] 2026-01-10 22:47:09,558 | INFO     | pgrp: 103943
[2026-01-10 17:48:13] 2026-01-10 22:47:09,558 | INFO     | corecount: 8
[2026-01-10 17:48:13] 2026-01-10 22:47:09,558 | INFO     | event service: False
[2026-01-10 17:48:13] 2026-01-10 22:47:09,558 | INFO     | sizes: {0: 2284451, 1: 2284650, 12: 2284650, 17: 2284940, 23: 2284968, 113247: 2364922, 113248: 2365049, 113252: 2374099, 113255: 2374155, 113260: 2374401}
[2026-01-10 17:48:13] 2026-01-10 22:47:09,558 | INFO     | --------------------------------------------------
[2026-01-10 17:48:13] 2026-01-10 22:47:09,558 | INFO     | 
[2026-01-10 17:48:13] 2026-01-10 22:47:09,558 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 17:48:13] 2026-01-10 22:47:09,573 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,573 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,573 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,574 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:48:13] 2026-01-10 22:47:09,575 | INFO     | job 6963375884 has completed (purged errors)
[2026-01-10 17:48:13] 2026-01-10 22:47:09,575 | INFO     | overall cleanup function is called
[2026-01-10 17:48:13] 2026-01-10 22:47:10,589 | INFO     | --- collectZombieJob: --- 10, [103943]
[2026-01-10 17:48:13] 2026-01-10 22:47:10,589 | INFO     | zombie collector waiting for pid 103943
[2026-01-10 17:48:13] 2026-01-10 22:47:10,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:48:13] 2026-01-10 22:47:10,589 | INFO     | collected zombie processes
[2026-01-10 17:48:13] 2026-01-10 22:47:10,589 | INFO     | will attempt to kill all subprocesses of pid=103943
[2026-01-10 17:48:13] 2026-01-10 22:47:10,936 | INFO     | process IDs to be killed: [103943] (in reverse order)
[2026-01-10 17:48:13] 2026-01-10 22:47:11,062 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:48:13] 2026-01-10 22:47:11,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:48:13] 2026-01-10 22:47:11,079 | INFO     | did not find any defunct processes belonging to 103943
[2026-01-10 17:48:13] 2026-01-10 22:47:11,094 | INFO     | did not find any defunct processes belonging to 103943
[2026-01-10 17:48:13] 2026-01-10 22:47:11,094 | INFO     | ready for new job
[2026-01-10 17:48:13] 2026-01-10 22:47:11,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:48:13] 2026-01-10 22:47:11,099 | INFO     | ***************************************
[2026-01-10 17:48:13] 2026-01-10 22:47:11,099 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:48:13] 2026-01-10 22:47:11,100 | INFO     | ***************************************
[2026-01-10 17:48:13] 2026-01-10 22:47:11,100 | INFO     | 
[2026-01-10 17:48:13] 2026-01-10 22:47:11,104 | INFO     | architecture information:
[2026-01-10 17:48:13] 2026-01-10 22:47:11,104 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:48:13] 2026-01-10 22:47:11,117 | INFO     | cat /etc/os-release:
[2026-01-10 17:48:13] NAME="CentOS Linux"
[2026-01-10 17:48:13] VERSION="7 (Core)"
[2026-01-10 17:48:13] ID="centos"
[2026-01-10 17:48:13] ID_LIKE="rhel fedora"
[2026-01-10 17:48:13] VERSION_ID="7"
[2026-01-10 17:48:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:48:13] ANSI_COLOR="0;31"
[2026-01-10 17:48:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:48:13] HOME_URL="https://www.centos.org/"
[2026-01-10 17:48:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:48:13] 
[2026-01-10 17:48:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:48:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:48:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:48:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:48:13] 
[2026-01-10 17:48:13] 2026-01-10 22:47:11,118 | INFO     | ***************************************
[2026-01-10 17:48:13] 2026-01-10 22:47:11,623 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 17:48:13] 2026-01-10 22:47:11,640 | INFO     | sufficient remaining disk space (74250715136 B)
[2026-01-10 17:48:13] 2026-01-10 22:47:11,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:48:13] 2026-01-10 22:47:11,640 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:48:13] 2026-01-10 22:47:11,640 | INFO     | update_server=False
[2026-01-10 17:48:13] 2026-01-10 22:47:11,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:48:13] 2026-01-10 22:47:11,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:48:13] 2026-01-10 22:47:11,871 | INFO     | all data control threads have been joined
[2026-01-10 17:48:13] 2026-01-10 22:47:12,110 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 17:48:13] 2026-01-10 22:47:12,110 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 17:48:13] 2026-01-10 22:47:12,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:48:13] 2026-01-10 22:47:12,110 | INFO     | will abort loop
[2026-01-10 17:48:13] 2026-01-10 22:47:12,511 | INFO     | all payload control threads have been joined
[2026-01-10 17:48:13] 2026-01-10 22:47:12,645 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:12,876 | INFO     | [data] control thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,079 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,115 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,231 | INFO     | all job control threads have been joined
[2026-01-10 17:48:13] 2026-01-10 22:47:13,515 | INFO     | [payload] control thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,530 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,632 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,647 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,701 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,789 | INFO     | [job] validate thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:13,997 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:14,110 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:14,142 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:14,237 | INFO     | [job] control thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:14,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:48:13] 2026-01-10 22:47:14,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:48:13] 2026-01-10 22:47:15,305 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:18,553 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:48:13] 2026-01-10 22:47:42,967 | INFO     | PID=95513 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 17:48:13] 2026-01-10 22:47:42,969 | INFO     | .. there are 27 such processes running
[2026-01-10 17:48:13] 2026-01-10 22:47:42,969 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:48:13] 2026-01-10 22:47:42,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:48:13] 2026-01-10 22:47:42,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:48:13] 2026-01-10 22:48:07,469 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:48:13] 2026-01-10 22:48:08,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477441910592)>', '<ExcThread(monitor, started 140476938172160)>']
[2026-01-10 17:48:13] 2026-01-10 22:48:09,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:48:13] 2026-01-10 22:48:09,127 | INFO     | [monitor] control thread has ended
[2026-01-10 17:48:13] 2026-01-10 22:48:13,444 | INFO     | all workflow threads have been joined
[2026-01-10 17:48:13] 2026-01-10 22:48:13,444 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:48:13] 2026-01-10 22:48:13,445 | INFO     | traces error code: 0
[2026-01-10 17:48:13] 2026-01-10 22:48:13,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:48:13] 2026-01-10 22:48:13,584 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:48:13] 2026-01-10 22:48:13,587 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:48:13] 2026-01-10 22:48:13,589 [wrapper] pilotpid: 95513
[2026-01-10 17:48:13] 2026-01-10 22:48:13,591 [wrapper] Pilot exit status: 0
[2026-01-10 17:48:13] 2026-01-10 22:48:13,599 [wrapper] pandaids: 6963375884
[2026-01-10 17:48:13] 2026-01-10 22:48:13,694 [wrapper] cleanup supervisor_pilot 2295690 95514
[2026-01-10 17:48:13] 2026-01-10 22:48:13,697 [wrapper] Test setup, not cleaning
[2026-01-10 17:48:13] 2026-01-10 22:48:13,700 [wrapper] apfmon messages muted
[2026-01-10 17:48:13] 2026-01-10 22:48:13,703 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:48:13] 2026-01-10 22:48:13,705 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:48:13]  *** Error codes and diagnostics ***
[2026-01-10 17:48:13]     "exeErrorCode": 0,
[2026-01-10 17:48:13]     "exeErrorDiag": "",
[2026-01-10 17:48:13]     "pilotErrorCode": 0,
[2026-01-10 17:48:13]     "pilotErrorDiag": "",
[2026-01-10 17:48:13]  *** Listing of results directory ***
[2026-01-10 17:48:13] total 1199956
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 17:48:13] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:48:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:18 run_atlas
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:18 job.xml
[2026-01-10 17:48:13] -rw-r--r--. 2 boincer umatlas 393450499 Jan  9 10:18 EVNT.47962006._000083.pool.root.1
[2026-01-10 17:48:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:18 start_atlas.sh
[2026-01-10 17:48:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:18 shared
[2026-01-10 17:48:13] -rw-r--r--. 2 boincer umatlas    610728 Jan  9 10:18 input.tar.gz
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:18 boinc_lockfile
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 10:18 pandaJob.out
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas        57 Jan  9 10:18 setup.sh.local
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas    989377 Jan  9 10:18 agis_schedconf.cvmfs.json
[2026-01-10 17:48:13] drwx------. 7 boincer umatlas      4096 Jan  9 10:18 pilot3
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas       534 Jan 10 17:26 boinc_task_state.xml
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas      6947 Jan 10 17:37 init_data.xml
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas 795276923 Jan 10 17:46 HITS.47962010._001045.pool.root.1
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas      1074 Jan 10 17:46 memory_monitor_summary.json
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas   1516240 Jan 10 17:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas   2787095 Jan 10 17:47 log.47962010._001045.job.log.tgz.1
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas        95 Jan 10 17:47 pilot_heartbeat.json
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas      8619 Jan 10 17:47 heartbeat.json
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 17:48 boinc_mmap_file
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas        30 Jan 10 17:48 wrapper_checkpoint.txt
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas      5008 Jan 10 17:48 pilotlog.txt
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas  15243248 Jan 10 17:48 log.47962010._001045.job.log.1
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas       353 Jan 10 17:48 output.list
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas       620 Jan 10 17:48 runtime_log
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas  18053120 Jan 10 17:48 result.tar.gz
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 17:48 runtime_log.err
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas       669 Jan 10 17:48 jtJLDmGsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnGhKDmrsmKsn.diag
[2026-01-10 17:48:13] -rw-r--r--. 1 boincer umatlas     21229 Jan 10 17:48 stderr.txt
[2026-01-10 17:48:13] HITS file was successfully produced:
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas 795276923 Jan 10 17:46 shared/HITS.pool.root.1
[2026-01-10 17:48:13]  *** Contents of shared directory: ***
[2026-01-10 17:48:13] total 1179128
[2026-01-10 17:48:13] -rw-r--r--. 2 boincer umatlas 393450499 Jan  9 10:18 ATLAS.root_0
[2026-01-10 17:48:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:18 start_atlas.sh
[2026-01-10 17:48:13] -rw-r--r--. 2 boincer umatlas    610728 Jan  9 10:18 input.tar.gz
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas 795276923 Jan 10 17:46 HITS.pool.root.1
[2026-01-10 17:48:13] -rw-------. 1 boincer umatlas  18053120 Jan 10 17:48 result.tar.gz
17:48:35 (90384): run_atlas exited; CPU time 210858.758752
17:48:35 (90384): called boinc_finish(0)

</stderr_txt>
]]>

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