Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:06:24 (29618): wrapper (7.7.26015): starting
19:06:24 (29618): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:06:24] Arguments: --nthreads 8
[2026-01-09 19:06:24] Threads: 8
[2026-01-09 19:06:24] Checking for CVMFS
[2026-01-09 19:06:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:06:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:06:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:06:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:06:24] 2.11.2.0 9669 35754 96352 154951 0 57 15867939 25165824 0 130560 0 14988353 99.851 7379643 3490 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 19:06:24] CVMFS is ok
[2026-01-09 19:06:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:06:24] Checking for apptainer binary...
[2026-01-09 19:06:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:06:24] Running /usr/bin/apptainer --version
[2026-01-09 19:06:24] apptainer version 1.3.2-1.el7
[2026-01-09 19:06:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:06:25] cg-vwn394.simple-grid.lan
[2026-01-09 19:06:25] apptainer works
[2026-01-09 19:06:25] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:06:25] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:06:25] Starting ATLAS job with PandaID=6963375882
[2026-01-09 19:06:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:32:57]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:32:57] 2026-01-10 14:32:02,691 | INFO     | .. there are 2 such processes running
[2026-01-10 15:32:57] 2026-01-10 14:32:03,697 | INFO     | time since job start (73525s) is within the limit (349056.0s)
[2026-01-10 15:32:57] 2026-01-10 14:32:04,393 | INFO     | monitor loop #4919: job 0:6963375882 is in state 'finished'
[2026-01-10 15:32:57] 2026-01-10 14:32:04,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:32:57] 2026-01-10 14:32:05,704 | INFO     | time since job start (73527s) is within the limit (349056.0s)
[2026-01-10 15:32:57] 2026-01-10 14:32:06,901 | INFO     | monitor loop #4920: job 0:6963375882 is in state 'finished'
[2026-01-10 15:32:57] 2026-01-10 14:32:06,901 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:32:57] 2026-01-10 14:32:07,714 | INFO     | time since job start (73529s) is within the limit (349056.0s)
[2026-01-10 15:32:57] 2026-01-10 14:32:09,406 | INFO     | monitor loop #4921: job 0:6963375882 is in state 'finished'
[2026-01-10 15:32:57] 2026-01-10 14:32:09,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:32:57] 2026-01-10 14:32:09,731 | INFO     | time since job start (73531s) is within the limit (349056.0s)
[2026-01-10 15:32:57] 2026-01-10 14:32:11,738 | INFO     | time since job start (73533s) is within the limit (349056.0s)
[2026-01-10 15:32:57] 2026-01-10 14:32:11,914 | INFO     | monitor loop #4922: job 0:6963375882 is in state 'finished'
[2026-01-10 15:32:57] 2026-01-10 14:32:11,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:32:57] 2026-01-10 14:32:13,745 | INFO     | time since job start (73535s) is within the limit (349056.0s)
[2026-01-10 15:32:57] 2026-01-10 14:32:14,422 | INFO     | monitor loop #4923: job 0:6963375882 is in state 'finished'
[2026-01-10 15:32:57] 2026-01-10 14:32:14,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:32:57] 2026-01-10 14:32:14,520 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 15:32:57] 2026-01-10 14:32:14,522 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 15:32:57] 2026-01-10 14:32:14,523 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963375882/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:32:57] 2026-01-10 14:32:14,524 | INFO     | extracted standard info from prmon json
[2026-01-10 15:32:57] 2026-01-10 14:32:14,524 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:32:57] 2026-01-10 14:32:14,524 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:32:57] 2026-01-10 14:32:14,549 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:32:57] 2026-01-10 14:32:14,551 | INFO     | sum of square deviations: 541208355279.82355
[2026-01-10 15:32:57] 2026-01-10 14:32:14,597 | INFO     | sum of deviations: 516535777212.93494
[2026-01-10 15:32:57] 2026-01-10 14:32:14,597 | INFO     | mean x: 1768018720.4036546
[2026-01-10 15:32:57] 2026-01-10 14:32:14,597 | INFO     | mean y: 2849866.5598006644
[2026-01-10 15:32:57] 2026-01-10 14:32:14,598 | INFO     | intersect: -1684568509.304964
[2026-01-10 15:32:57] 2026-01-10 14:32:14,599 | INFO     | chi2: 18.238915018833087
[2026-01-10 15:32:57] 2026-01-10 14:32:14,601 | INFO     | sum of square deviations: 534494124010.72363
[2026-01-10 15:32:57] 2026-01-10 14:32:14,650 | INFO     | sum of deviations: 922079958371.5391
[2026-01-10 15:32:57] 2026-01-10 14:32:14,650 | INFO     | mean x: 1768018567.9074228
[2026-01-10 15:32:57] 2026-01-10 14:32:14,650 | INFO     | mean y: 2859075.9958298584
[2026-01-10 15:32:57] 2026-01-10 14:32:14,651 | INFO     | intersect: -3047229623.320678
[2026-01-10 15:32:57] 2026-01-10 14:32:14,652 | INFO     | chi2: 14.849388664078731
[2026-01-10 15:32:57] 2026-01-10 14:32:14,652 | INFO     | current chi2=14.849388664078731 (change=18.58403502211841 %)
[2026-01-10 15:32:57] 2026-01-10 14:32:14,652 | INFO     | right removable region: 1198
[2026-01-10 15:32:57] 2026-01-10 14:32:14,654 | INFO     | sum of square deviations: 534493460330.724
[2026-01-10 15:32:57] 2026-01-10 14:32:14,701 | INFO     | sum of deviations: 186065924407.22336
[2026-01-10 15:32:57] 2026-01-10 14:32:14,702 | INFO     | mean x: 1768018872.9074228
[2026-01-10 15:32:57] 2026-01-10 14:32:14,702 | INFO     | mean y: 2857363.929941618
[2026-01-10 15:32:57] 2026-01-10 14:32:14,702 | INFO     | intersect: -612618952.1944577
[2026-01-10 15:32:57] 2026-01-10 14:32:14,703 | INFO     | chi2: 15.946022966314716
[2026-01-10 15:32:57] 2026-01-10 14:32:14,704 | INFO     | current chi2=15.946022966314716 (change=12.571427906488857 %)
[2026-01-10 15:32:57] 2026-01-10 14:32:14,704 | INFO     | left removable region: 10
[2026-01-10 15:32:57] 2026-01-10 14:32:14,706 | INFO     | sum of square deviations: 519917611034.2427
[2026-01-10 15:32:57] 2026-01-10 14:32:14,755 | INFO     | sum of deviations: 600198184601.5248
[2026-01-10 15:32:57] 2026-01-10 14:32:14,755 | INFO     | mean x: 1768018842.4141414
[2026-01-10 15:32:57] 2026-01-10 14:32:14,756 | INFO     | mean y: 2870409.313973064
[2026-01-10 15:32:57] 2026-01-10 14:32:14,756 | INFO     | intersect: -2038148546.4535537
[2026-01-10 15:32:57] 2026-01-10 14:32:14,757 | INFO     | chi2: 11.722558372432424
[2026-01-10 15:32:57] 2026-01-10 14:32:14,758 | INFO     | current memory leak: 1.15 B/s (using 1188 data points, chi2=11.72)
[2026-01-10 15:32:57] 2026-01-10 14:32:14,759 | INFO     | could have reported an average CPU frequency of 1999 MHz (41 samples)
[2026-01-10 15:32:57] 2026-01-10 14:32:14,760 | INFO     | ..............................
[2026-01-10 15:32:57] 2026-01-10 14:32:14,760 | INFO     | . Timing measurements:
[2026-01-10 15:32:57] 2026-01-10 14:32:14,760 | INFO     | . get job = 0 s
[2026-01-10 15:32:57] 2026-01-10 14:32:14,760 | INFO     | . initial setup = 1 s
[2026-01-10 15:32:57] 2026-01-10 14:32:14,760 | INFO     | . payload setup = 6 s
[2026-01-10 15:32:57] 2026-01-10 14:32:14,760 | INFO     | . stage-in = 0 s
[2026-01-10 15:32:57] 2026-01-10 14:32:14,760 | INFO     | . payload execution = 73396 s
[2026-01-10 15:32:57] 2026-01-10 14:32:14,760 | INFO     | . stage-out = 5 s
[2026-01-10 15:32:57] 2026-01-10 14:32:14,761 | INFO     | . log creation = 2 s
[2026-01-10 15:32:57] 2026-01-10 14:32:14,761 | INFO     | ..............................
[2026-01-10 15:32:57] 2026-01-10 14:32:14,925 | INFO     | 
[2026-01-10 15:32:57] 2026-01-10 14:32:14,925 | INFO     | job summary report
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | --------------------------------------------------
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | PanDA job id: 6963375882
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | task id: 47962010
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | errors: (none)
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | pilot state: finished 
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | transexitcode: 0
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | exeerrorcode: 0
[2026-01-10 15:32:57] 2026-01-10 14:32:14,926 | INFO     | exeerrordiag: 
[2026-01-10 15:32:57] 2026-01-10 14:32:14,927 | INFO     | exitcode: 0
[2026-01-10 15:32:57] 2026-01-10 14:32:14,927 | INFO     | exitmsg: OK
[2026-01-10 15:32:57] 2026-01-10 14:32:14,927 | INFO     | cpuconsumptiontime: 344422 s
[2026-01-10 15:32:57] 2026-01-10 14:32:14,927 | INFO     | nevents: 900
[2026-01-10 15:32:57] 2026-01-10 14:32:14,927 | INFO     | neventsw: 0
[2026-01-10 15:32:57] 2026-01-10 14:32:14,927 | INFO     | pid: 7396
[2026-01-10 15:32:57] 2026-01-10 14:32:14,927 | INFO     | pgrp: 7396
[2026-01-10 15:32:57] 2026-01-10 14:32:14,927 | INFO     | corecount: 8
[2026-01-10 15:32:57] 2026-01-10 14:32:14,928 | INFO     | event service: False
[2026-01-10 15:32:57] 2026-01-10 14:32:14,928 | INFO     | sizes: {0: 2286960, 5: 2287254, 11: 2287310, 73408: 2343822, 73414: 2351762, 73520: 2352048}
[2026-01-10 15:32:57] 2026-01-10 14:32:14,928 | INFO     | --------------------------------------------------
[2026-01-10 15:32:57] 2026-01-10 14:32:14,928 | INFO     | 
[2026-01-10 15:32:57] 2026-01-10 14:32:14,928 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-10 15:32:57] 2026-01-10 14:32:15,597 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,597 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,597 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,597 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,599 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:32:57] 2026-01-10 14:32:15,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,599 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:32:57] 2026-01-10 14:32:15,599 | INFO     | job 6963375882 has completed (purged errors)
[2026-01-10 15:32:57] 2026-01-10 14:32:15,599 | INFO     | overall cleanup function is called
[2026-01-10 15:32:57] 2026-01-10 14:32:16,621 | INFO     | --- collectZombieJob: --- 10, [7396]
[2026-01-10 15:32:57] 2026-01-10 14:32:16,621 | INFO     | zombie collector waiting for pid 7396
[2026-01-10 15:32:57] 2026-01-10 14:32:16,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:32:57] 2026-01-10 14:32:16,622 | INFO     | collected zombie processes
[2026-01-10 15:32:57] 2026-01-10 14:32:16,622 | INFO     | will attempt to kill all subprocesses of pid=7396
[2026-01-10 15:32:57] 2026-01-10 14:32:16,703 | INFO     | process IDs to be killed: [7396] (in reverse order)
[2026-01-10 15:32:57] 2026-01-10 14:32:17,651 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:32:57] 2026-01-10 14:32:17,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:32:57] 2026-01-10 14:32:17,654 | INFO     | did not find any defunct processes belonging to 7396
[2026-01-10 15:32:57] 2026-01-10 14:32:17,655 | INFO     | did not find any defunct processes belonging to 7396
[2026-01-10 15:32:57] 2026-01-10 14:32:17,656 | INFO     | ready for new job
[2026-01-10 15:32:57] 2026-01-10 14:32:17,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:32:57] 2026-01-10 14:32:17,661 | INFO     | ***************************************
[2026-01-10 15:32:57] 2026-01-10 14:32:17,661 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:32:57] 2026-01-10 14:32:17,661 | INFO     | ***************************************
[2026-01-10 15:32:57] 2026-01-10 14:32:17,661 | INFO     | 
[2026-01-10 15:32:57] 2026-01-10 14:32:17,662 | INFO     | pilot is running in a VM
[2026-01-10 15:32:57] 2026-01-10 14:32:17,662 | INFO     | architecture information:
[2026-01-10 15:32:57] 2026-01-10 14:32:17,665 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:32:57] 2026-01-10 14:32:17,894 | INFO     | cat /etc/os-release:
[2026-01-10 15:32:57] NAME="CentOS Linux"
[2026-01-10 15:32:57] VERSION="7 (Core)"
[2026-01-10 15:32:57] ID="centos"
[2026-01-10 15:32:57] ID_LIKE="rhel fedora"
[2026-01-10 15:32:57] VERSION_ID="7"
[2026-01-10 15:32:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:32:57] ANSI_COLOR="0;31"
[2026-01-10 15:32:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:32:57] HOME_URL="https://www.centos.org/"
[2026-01-10 15:32:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:32:57] 
[2026-01-10 15:32:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:32:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:32:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:32:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:32:57] 
[2026-01-10 15:32:57] 2026-01-10 14:32:17,894 | INFO     | ***************************************
[2026-01-10 15:32:57] 2026-01-10 14:32:18,397 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-10 15:32:57] 2026-01-10 14:32:18,543 | INFO     | sufficient remaining disk space (495332622336 B)
[2026-01-10 15:32:57] 2026-01-10 14:32:18,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:32:57] 2026-01-10 14:32:18,546 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:32:57] 2026-01-10 14:32:18,547 | INFO     | update_server=False
[2026-01-10 15:32:57] 2026-01-10 14:32:18,547 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:32:57] 2026-01-10 14:32:18,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:32:57] 2026-01-10 14:32:18,549 | INFO     | aborting loop
[2026-01-10 15:32:57] 2026-01-10 14:32:18,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:32:57] 2026-01-10 14:32:18,625 | INFO     | all payload control threads have been joined
[2026-01-10 15:32:57] 2026-01-10 14:32:18,695 | INFO     | all data control threads have been joined
[2026-01-10 15:32:57] 2026-01-10 14:32:19,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:32:57] 2026-01-10 14:32:19,552 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:19,554 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:19,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:19,631 | INFO     | [payload] control thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:19,693 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:19,701 | INFO     | [data] control thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:19,880 | INFO     | all job control threads have been joined
[2026-01-10 15:32:57] 2026-01-10 14:32:19,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:32:57] 2026-01-10 14:32:20,020 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:20,082 | INFO     | [job] validate thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:20,515 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:20,550 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:20,636 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:20,745 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:20,886 | INFO     | [job] control thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:20,954 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:21,241 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:22,562 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:32:57] 2026-01-10 14:32:46,230 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:32:57] 2026-01-10 14:32:46,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139931163739968)>', '<ExcThread(monitor, started 139930864953088)>']
[2026-01-10 15:32:57] 2026-01-10 14:32:46,896 | INFO     | PID=946 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-10 15:32:57] 2026-01-10 14:32:46,896 | INFO     | .. there are 2 such processes running
[2026-01-10 15:32:57] 2026-01-10 14:32:46,898 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:32:57] 2026-01-10 14:32:46,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:32:57] 2026-01-10 14:32:46,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:32:57] 2026-01-10 14:32:46,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:32:57] 2026-01-10 14:32:46,899 | INFO     | [monitor] control thread has ended
[2026-01-10 15:32:57] 2026-01-10 14:32:51,631 | INFO     | all workflow threads have been joined
[2026-01-10 15:32:57] 2026-01-10 14:32:51,631 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:32:57] 2026-01-10 14:32:51,632 | INFO     | traces error code: 0
[2026-01-10 15:32:57] 2026-01-10 14:32:51,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:32:57] 2026-01-10 14:32:52,054 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:32:57] 2026-01-10 14:32:52,131 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:32:57] 2026-01-10 14:32:52,217 [wrapper] pilotpid: 946
[2026-01-10 15:32:57] 2026-01-10 14:32:52,291 [wrapper] Pilot exit status: 0
[2026-01-10 15:32:57] 2026-01-10 14:32:52,674 [wrapper] pandaids: 6963375882
[2026-01-10 15:32:57] 2026-01-10 14:32:53,615 [wrapper] cleanup supervisor_pilot 12084 947
[2026-01-10 15:32:57] 2026-01-10 14:32:53,711 [wrapper] Test setup, not cleaning
[2026-01-10 15:32:57] 2026-01-10 14:32:53,811 [wrapper] apfmon messages muted
[2026-01-10 15:32:57] 2026-01-10 14:32:53,926 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:32:57] 2026-01-10 14:32:54,042 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:32:57]  *** Error codes and diagnostics ***
[2026-01-10 15:32:57]     "exeErrorCode": 0,
[2026-01-10 15:32:57]     "exeErrorDiag": "",
[2026-01-10 15:32:57]     "pilotErrorCode": 0,
[2026-01-10 15:32:57]     "pilotErrorDiag": "",
[2026-01-10 15:32:57]  *** Listing of results directory ***
[2026-01-10 15:32:57] total 1567336
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-10 15:32:57] -rwx------. 1 boinc boinc     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc       100 Jan  9 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:32:57] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 19:06 run_atlas
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc       105 Jan  9 19:06 job.xml
[2026-01-10 15:32:57] -rw-r--r--. 2 boinc boinc 392783492 Jan  9 19:06 EVNT.47962006._000082.pool.root.1
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc      6390 Jan  9 19:06 init_data.xml
[2026-01-10 15:32:57] -rw-r--r--. 2 boinc boinc 393450499 Jan  9 19:06 EVNT.47962006._000083.pool.root.1
[2026-01-10 15:32:57] -rw-r--r--. 2 boinc boinc     15897 Jan  9 19:06 start_atlas.sh
[2026-01-10 15:32:57] drwxrwx--x. 2 boinc boinc        88 Jan  9 19:06 shared
[2026-01-10 15:32:57] -rw-r--r--. 2 boinc boinc    592702 Jan  9 19:06 input.tar.gz
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc         0 Jan  9 19:06 boinc_lockfile
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc      3422 Jan  9 19:06 pandaJob.out
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc    989356 Jan  9 19:06 agis_schedconf.cvmfs.json
[2026-01-10 15:32:57] drwx------. 5 boinc boinc      4096 Jan  9 19:06 pilot3
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc       533 Jan 10 15:04 boinc_task_state.xml
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc 790620389 Jan 10 15:29 HITS.47962010._001043.pool.root.1
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc      1032 Jan 10 15:30 memory_monitor_summary.json
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc   1516240 Jan 10 15:30 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc   2303989 Jan 10 15:30 log.47962010._001043.job.log.tgz.1
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc      8819 Jan 10 15:32 heartbeat.json
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc      8192 Jan 10 15:32 boinc_mmap_file
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc        29 Jan 10 15:32 wrapper_checkpoint.txt
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc        95 Jan 10 15:32 pilot_heartbeat.json
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc      4883 Jan 10 15:32 pilotlog.txt
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc   9789825 Jan 10 15:32 log.47962010._001043.job.log.1
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc       353 Jan 10 15:32 output.list
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc       620 Jan 10 15:32 runtime_log
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc  12113920 Jan 10 15:32 result.tar.gz
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc      8885 Jan 10 15:32 runtime_log.err
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc       661 Jan 10 15:32 2KBLDmGsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlGhKDmjurmIm.diag
[2026-01-10 15:32:57] -rw-r--r--. 1 boinc boinc     21230 Jan 10 15:32 stderr.txt
[2026-01-10 15:32:57] HITS file was successfully produced:
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc 790620389 Jan 10 15:29 shared/HITS.pool.root.1
[2026-01-10 15:32:57]  *** Contents of shared directory: ***
[2026-01-10 15:32:57] total 1552332
[2026-01-10 15:32:57] -rw-r--r--. 2 boinc boinc 392783492 Jan  9 19:06 ATLAS.root_0
[2026-01-10 15:32:57] -rw-r--r--. 2 boinc boinc 393450499 Jan  9 19:06 ATLAS.root_1
[2026-01-10 15:32:57] -rw-r--r--. 2 boinc boinc     15897 Jan  9 19:06 start_atlas.sh
[2026-01-10 15:32:57] -rw-r--r--. 2 boinc boinc    592702 Jan  9 19:06 input.tar.gz
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc 790620389 Jan 10 15:29 HITS.pool.root.1
[2026-01-10 15:32:57] -rw-------. 1 boinc boinc  12113920 Jan 10 15:32 result.tar.gz
15:32:58 (29618): run_atlas exited; CPU time 344649.112005
15:32:58 (29618): called boinc_finish(0)

</stderr_txt>
]]>

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