Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:13:43 (21997): wrapper (7.7.26015): starting
10:13:43 (21997): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 10:13:43] Arguments: --nthreads 12
[2026-01-09 10:13:43] Threads: 12
[2026-01-09 10:13:43] Checking for CVMFS
[2026-01-09 10:13:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:13:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:13:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:13:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:13:44] 2.11.2.0 3081 351160 96932 154947 0 56 15411024 20275201 1 130560 1 148842933 99.955 20181459 16107 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:13:44] CVMFS is ok
[2026-01-09 10:13:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:13:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:13:44] Further information can be found at the LHC@home message board.
[2026-01-09 10:13:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:13:44] Checking for apptainer binary...
[2026-01-09 10:13:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:13:44] Running /usr/bin/apptainer --version
[2026-01-09 10:13:44] apptainer version 1.3.2-1.el7
[2026-01-09 10:13:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:13:45] c-205-29.aglt2.org
[2026-01-09 10:13:45] apptainer works
[2026-01-09 10:13:45] Set ATHENA_PROC_NUMBER=12
[2026-01-09 10:13:45] Set ATHENA_CORE_NUMBER=12
[2026-01-09 10:13:45] Starting ATLAS job with PandaID=6963375879
[2026-01-09 10:13:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:00:51]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:00:51] 2026-01-09 23:00:19,922 | INFO     | PID=25706 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 18:00:51] 2026-01-09 23:00:20,923 | INFO     | time since job start (27980s) is within the limit (349056.0s)
[2026-01-09 18:00:51] 2026-01-09 23:00:21,381 | INFO     | monitor loop #2092: job 0:6963375879 is in state 'finished'
[2026-01-09 18:00:51] 2026-01-09 23:00:21,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,839 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:00:51] 2026-01-09 23:00:22,843 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2026-01-09 18:00:51] 2026-01-09 23:00:22,845 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963375879/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,846 | INFO     | extracted standard info from prmon json
[2026-01-09 18:00:51] 2026-01-09 23:00:22,846 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:00:51] 2026-01-09 23:00:22,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:00:51] 2026-01-09 23:00:22,854 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:00:51] 2026-01-09 23:00:22,855 | INFO     | sum of square deviations: 29985927934.705936
[2026-01-09 18:00:51] 2026-01-09 23:00:22,859 | INFO     | sum of deviations: 341528165300.4706
[2026-01-09 18:00:51] 2026-01-09 23:00:22,859 | INFO     | mean x: 1767985640.1764705
[2026-01-09 18:00:51] 2026-01-09 23:00:22,860 | INFO     | mean y: 3405340.191721133
[2026-01-09 18:00:51] 2026-01-09 23:00:22,860 | INFO     | intersect: -20133269878.992867
[2026-01-09 18:00:51] 2026-01-09 23:00:22,860 | INFO     | chi2: 6.911597295666289
[2026-01-09 18:00:51] 2026-01-09 23:00:22,861 | INFO     | sum of square deviations: 29016660047.048534
[2026-01-09 18:00:51] 2026-01-09 23:00:22,865 | INFO     | sum of deviations: 526381809890.0099
[2026-01-09 18:00:51] 2026-01-09 23:00:22,865 | INFO     | mean x: 1767985487.678414
[2026-01-09 18:00:51] 2026-01-09 23:00:22,865 | INFO     | mean y: 3434400.1233480177
[2026-01-09 18:00:51] 2026-01-09 23:00:22,866 | INFO     | intersect: -32069016369.692116
[2026-01-09 18:00:51] 2026-01-09 23:00:22,866 | INFO     | chi2: 3.5850409829959347
[2026-01-09 18:00:51] 2026-01-09 23:00:22,866 | INFO     | current chi2=3.5850409829959347 (change=48.130065603737826 %)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,867 | INFO     | sum of square deviations: 28068508834.387592
[2026-01-09 18:00:51] 2026-01-09 23:00:22,871 | INFO     | sum of deviations: 609833067570.5056
[2026-01-09 18:00:51] 2026-01-09 23:00:22,871 | INFO     | mean x: 1767985335.1804008
[2026-01-09 18:00:51] 2026-01-09 23:00:22,871 | INFO     | mean y: 3447797.0801781737
[2026-01-09 18:00:51] 2026-01-09 23:00:22,871 | INFO     | intersect: -38408850010.91117
[2026-01-09 18:00:51] 2026-01-09 23:00:22,872 | INFO     | chi2: 2.757886531052825
[2026-01-09 18:00:51] 2026-01-09 23:00:22,872 | INFO     | current chi2=2.757886531052825 (change=23.072384830922523 %)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,872 | INFO     | right removable region: 448
[2026-01-09 18:00:51] 2026-01-09 23:00:22,873 | INFO     | sum of square deviations: 29016610637.048508
[2026-01-09 18:00:51] 2026-01-09 23:00:22,877 | INFO     | sum of deviations: 180976509231.74466
[2026-01-09 18:00:51] 2026-01-09 23:00:22,877 | INFO     | mean x: 1767985792.678414
[2026-01-09 18:00:51] 2026-01-09 23:00:22,877 | INFO     | mean y: 3430537.922907489
[2026-01-09 18:00:51] 2026-01-09 23:00:22,877 | INFO     | intersect: -11023491287.389366
[2026-01-09 18:00:51] 2026-01-09 23:00:22,878 | INFO     | chi2: 4.35391633020982
[2026-01-09 18:00:51] 2026-01-09 23:00:22,878 | INFO     | current chi2=4.35391633020982 (change=37.005642198803834 %)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,878 | INFO     | sum of square deviations: 28068410014.387592
[2026-01-09 18:00:51] 2026-01-09 23:00:22,882 | INFO     | sum of deviations: 143382291720.1114
[2026-01-09 18:00:51] 2026-01-09 23:00:22,883 | INFO     | mean x: 1767985945.1804008
[2026-01-09 18:00:51] 2026-01-09 23:00:22,883 | INFO     | mean y: 3436578.6035634745
[2026-01-09 18:00:51] 2026-01-09 23:00:22,883 | INFO     | intersect: -9027993289.314589
[2026-01-09 18:00:51] 2026-01-09 23:00:22,883 | INFO     | chi2: 4.27730081760327
[2026-01-09 18:00:51] 2026-01-09 23:00:22,883 | INFO     | current chi2=4.27730081760327 (change=1.7596918910671449 %)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,884 | INFO     | left removable region: 20
[2026-01-09 18:00:51] 2026-01-09 23:00:22,884 | INFO     | sum of square deviations: 24311421721.670486
[2026-01-09 18:00:51] 2026-01-09 23:00:22,888 | INFO     | sum of deviations: 370908542693.3599
[2026-01-09 18:00:51] 2026-01-09 23:00:22,888 | INFO     | mean x: 1767985914.6892524
[2026-01-09 18:00:51] 2026-01-09 23:00:22,888 | INFO     | mean y: 3489158.686915888
[2026-01-09 18:00:51] 2026-01-09 23:00:22,888 | INFO     | intersect: -26969885192.976418
[2026-01-09 18:00:51] 2026-01-09 23:00:22,889 | INFO     | chi2: 0.025700189367537533
[2026-01-09 18:00:51] 2026-01-09 23:00:22,889 | INFO     | current memory leak: 15.26 B/s (using 428 data points, chi2=0.03)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,889 | INFO     | could have reported an average CPU frequency of 2419 MHz (19 samples)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,889 | INFO     | ..............................
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | . Timing measurements:
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | . get job = 0 s
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | . initial setup = 2 s
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | . payload setup = 9 s
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | . stage-in = 0 s
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | . payload execution = 27944 s
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | . stage-out = 3 s
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | . log creation = 0 s
[2026-01-09 18:00:51] 2026-01-09 23:00:22,890 | INFO     | ..............................
[2026-01-09 18:00:51] 2026-01-09 23:00:22,934 | INFO     | time since job start (27982s) is within the limit (349056.0s)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,981 | INFO     | 
[2026-01-09 18:00:51] 2026-01-09 23:00:22,981 | INFO     | job summary report
[2026-01-09 18:00:51] 2026-01-09 23:00:22,981 | INFO     | --------------------------------------------------
[2026-01-09 18:00:51] 2026-01-09 23:00:22,981 | INFO     | PanDA job id: 6963375879
[2026-01-09 18:00:51] 2026-01-09 23:00:22,982 | INFO     | task id: 47962010
[2026-01-09 18:00:51] 2026-01-09 23:00:22,982 | INFO     | errors: (none)
[2026-01-09 18:00:51] 2026-01-09 23:00:22,982 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:00:51] 2026-01-09 23:00:22,982 | INFO     | pilot state: finished 
[2026-01-09 18:00:51] 2026-01-09 23:00:22,982 | INFO     | transexitcode: 0
[2026-01-09 18:00:51] 2026-01-09 23:00:22,982 | INFO     | exeerrorcode: 0
[2026-01-09 18:00:51] 2026-01-09 23:00:22,983 | INFO     | exeerrordiag: 
[2026-01-09 18:00:51] 2026-01-09 23:00:22,983 | INFO     | exitcode: 0
[2026-01-09 18:00:51] 2026-01-09 23:00:22,983 | INFO     | exitmsg: OK
[2026-01-09 18:00:51] 2026-01-09 23:00:22,983 | INFO     | cpuconsumptiontime: 321422 s
[2026-01-09 18:00:51] 2026-01-09 23:00:22,983 | INFO     | nevents: 900
[2026-01-09 18:00:51] 2026-01-09 23:00:22,983 | INFO     | neventsw: 0
[2026-01-09 18:00:51] 2026-01-09 23:00:22,983 | INFO     | pid: 32113
[2026-01-09 18:00:51] 2026-01-09 23:00:22,984 | INFO     | pgrp: 32113
[2026-01-09 18:00:51] 2026-01-09 23:00:22,984 | INFO     | corecount: 12
[2026-01-09 18:00:51] 2026-01-09 23:00:22,984 | INFO     | event service: False
[2026-01-09 18:00:51] 2026-01-09 23:00:22,984 | INFO     | sizes: {0: 2284622, 5: 2284884, 11: 2284940, 27957: 2322968, 27960: 2331962, 27961: 2332018, 27966: 2332392}
[2026-01-09 18:00:51] 2026-01-09 23:00:22,984 | INFO     | --------------------------------------------------
[2026-01-09 18:00:51] 2026-01-09 23:00:22,984 | INFO     | 
[2026-01-09 18:00:51] 2026-01-09 23:00:22,984 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 18:00:51] 2026-01-09 23:00:23,007 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,007 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,008 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,008 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,010 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:00:51] 2026-01-09 23:00:23,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,011 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:00:51] 2026-01-09 23:00:23,011 | INFO     | job 6963375879 has completed (purged errors)
[2026-01-09 18:00:51] 2026-01-09 23:00:23,011 | INFO     | overall cleanup function is called
[2026-01-09 18:00:51] 2026-01-09 23:00:24,028 | INFO     | --- collectZombieJob: --- 10, [32113]
[2026-01-09 18:00:51] 2026-01-09 23:00:24,028 | INFO     | zombie collector waiting for pid 32113
[2026-01-09 18:00:51] 2026-01-09 23:00:24,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:00:51] 2026-01-09 23:00:24,028 | INFO     | collected zombie processes
[2026-01-09 18:00:51] 2026-01-09 23:00:24,029 | INFO     | will attempt to kill all subprocesses of pid=32113
[2026-01-09 18:00:51] 2026-01-09 23:00:24,122 | INFO     | process IDs to be killed: [32113] (in reverse order)
[2026-01-09 18:00:51] 2026-01-09 23:00:24,173 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:00:51] 2026-01-09 23:00:24,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:00:51] 2026-01-09 23:00:24,176 | INFO     | did not find any defunct processes belonging to 32113
[2026-01-09 18:00:51] 2026-01-09 23:00:24,179 | INFO     | did not find any defunct processes belonging to 32113
[2026-01-09 18:00:51] 2026-01-09 23:00:24,179 | INFO     | ready for new job
[2026-01-09 18:00:51] 2026-01-09 23:00:24,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:00:51] 2026-01-09 23:00:24,182 | INFO     | ***************************************
[2026-01-09 18:00:51] 2026-01-09 23:00:24,182 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:00:51] 2026-01-09 23:00:24,182 | INFO     | ***************************************
[2026-01-09 18:00:51] 2026-01-09 23:00:24,182 | INFO     | 
[2026-01-09 18:00:51] 2026-01-09 23:00:24,183 | INFO     | architecture information:
[2026-01-09 18:00:51] 2026-01-09 23:00:24,184 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:00:51] 2026-01-09 23:00:24,199 | INFO     | cat /etc/os-release:
[2026-01-09 18:00:51] NAME="CentOS Linux"
[2026-01-09 18:00:51] VERSION="7 (Core)"
[2026-01-09 18:00:51] ID="centos"
[2026-01-09 18:00:51] ID_LIKE="rhel fedora"
[2026-01-09 18:00:51] VERSION_ID="7"
[2026-01-09 18:00:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:00:51] ANSI_COLOR="0;31"
[2026-01-09 18:00:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:00:51] HOME_URL="https://www.centos.org/"
[2026-01-09 18:00:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:00:51] 
[2026-01-09 18:00:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:00:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:00:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:00:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:00:51] 
[2026-01-09 18:00:51] 2026-01-09 23:00:24,199 | INFO     | ***************************************
[2026-01-09 18:00:51] 2026-01-09 23:00:24,702 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 18:00:51] 2026-01-09 23:00:24,718 | INFO     | sufficient remaining disk space (28396486656 B)
[2026-01-09 18:00:51] 2026-01-09 23:00:24,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:00:51] 2026-01-09 23:00:24,718 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:00:51] 2026-01-09 23:00:24,718 | INFO     | update_server=False
[2026-01-09 18:00:51] 2026-01-09 23:00:24,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:00:51] 2026-01-09 23:00:24,719 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 18:00:51] 2026-01-09 23:00:24,719 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:00:51] 2026-01-09 23:00:24,720 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:00:51] 2026-01-09 23:00:24,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:00:51] 2026-01-09 23:00:24,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:00:51] 2026-01-09 23:00:24,824 | INFO     | all data control threads have been joined
[2026-01-09 18:00:51] 2026-01-09 23:00:24,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:00:51] 2026-01-09 23:00:24,891 | INFO     | aborting loop
[2026-01-09 18:00:51] 2026-01-09 23:00:25,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:00:51] 2026-01-09 23:00:25,724 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:25,725 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:25,735 | INFO     | all payload control threads have been joined
[2026-01-09 18:00:51] 2026-01-09 23:00:25,759 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:25,830 | INFO     | [data] control thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:25,897 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:25,899 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:25,981 | INFO     | all job control threads have been joined
[2026-01-09 18:00:51] 2026-01-09 23:00:26,064 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:26,475 | INFO     | [job] validate thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:26,740 | INFO     | [payload] control thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:26,741 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:26,765 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:26,846 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:26,986 | INFO     | [job] control thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:27,014 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:27,063 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:27,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:00:51] 2026-01-09 23:00:31,642 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:00:51] 2026-01-09 23:00:45,356 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:00:51] 2026-01-09 23:00:45,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140403091838784)>', '<ExcThread(monitor, started 140402279577344)>']
[2026-01-09 18:00:51] 2026-01-09 23:00:46,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:00:51] 2026-01-09 23:00:46,830 | INFO     | [monitor] control thread has ended
[2026-01-09 18:00:51] 2026-01-09 23:00:50,889 | INFO     | all workflow threads have been joined
[2026-01-09 18:00:51] 2026-01-09 23:00:50,889 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:00:51] 2026-01-09 23:00:50,895 | INFO     | traces error code: 0
[2026-01-09 18:00:51] 2026-01-09 23:00:50,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:00:51] 2026-01-09 23:00:50,986 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:00:51] 2026-01-09 23:00:50,990 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:00:51] 2026-01-09 23:00:50,994 [wrapper] pilotpid: 25706
[2026-01-09 18:00:51] 2026-01-09 23:00:50,997 [wrapper] Pilot exit status: 0
[2026-01-09 18:00:51] 2026-01-09 23:00:51,012 [wrapper] pandaids: 6963375879
[2026-01-09 18:00:51] 2026-01-09 23:00:51,051 [wrapper] cleanup supervisor_pilot 26000 25707
[2026-01-09 18:00:51] 2026-01-09 23:00:51,054 [wrapper] Test setup, not cleaning
[2026-01-09 18:00:51] 2026-01-09 23:00:51,058 [wrapper] apfmon messages muted
[2026-01-09 18:00:51] 2026-01-09 23:00:51,062 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:00:51] 2026-01-09 23:00:51,065 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:00:51]  *** Error codes and diagnostics ***
[2026-01-09 18:00:51]     "exeErrorCode": 0,
[2026-01-09 18:00:51]     "exeErrorDiag": "",
[2026-01-09 18:00:51]     "pilotErrorCode": 0,
[2026-01-09 18:00:51]     "pilotErrorDiag": "",
[2026-01-09 18:00:51]  *** Listing of results directory ***
[2026-01-09 18:00:51] total 1175208
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-09 18:00:51] -rwx------ 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas       100 Jan  9 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:00:51] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 10:13 run_atlas
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas       105 Jan  9 10:13 job.xml
[2026-01-09 18:00:51] -rw-r--r-- 2 boincer umatlas 392783492 Jan  9 10:13 EVNT.47962006._000082.pool.root.1
[2026-01-09 18:00:51] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:13 start_atlas.sh
[2026-01-09 18:00:51] drwxrwx--x 2 boincer umatlas      4096 Jan  9 10:13 shared
[2026-01-09 18:00:51] -rw-r--r-- 2 boincer umatlas    592610 Jan  9 10:13 input.tar.gz
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas         0 Jan  9 10:13 boinc_lockfile
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas      2892 Jan  9 10:13 pandaJob.out
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas        57 Jan  9 10:13 setup.sh.local
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas    989377 Jan  9 10:13 agis_schedconf.cvmfs.json
[2026-01-09 18:00:51] drwx------ 5 boincer umatlas      4096 Jan  9 10:14 pilot3
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas       533 Jan  9 17:49 boinc_task_state.xml
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas      5955 Jan  9 17:54 init_data.xml
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas 794483754 Jan  9 17:59 HITS.47962010._001040.pool.root.1
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas        95 Jan  9 17:59 pilot_heartbeat.json
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas      1061 Jan  9 18:00 memory_monitor_summary.json
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas   1516240 Jan  9 18:00 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas   2197501 Jan  9 18:00 log.47962010._001040.job.log.tgz.1
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas      8657 Jan  9 18:00 heartbeat.json
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 18:00 boinc_mmap_file
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas        29 Jan  9 18:00 wrapper_checkpoint.txt
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas      4552 Jan  9 18:00 pilotlog.txt
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas   3913846 Jan  9 18:00 log.47962010._001040.job.log.1
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas       353 Jan  9 18:00 output.list
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas       620 Jan  9 18:00 runtime_log
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas   6133760 Jan  9 18:00 result.tar.gz
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas      9345 Jan  9 18:00 runtime_log.err
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas       670 Jan  9 18:00 854KDmGsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjGhKDmi5SS4m.diag
[2026-01-09 18:00:51] -rw-r--r-- 1 boincer umatlas     21245 Jan  9 18:00 stderr.txt
[2026-01-09 18:00:51] HITS file was successfully produced:
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas 794483754 Jan  9 17:59 shared/HITS.pool.root.1
[2026-01-09 18:00:51]  *** Contents of shared directory: ***
[2026-01-09 18:00:51] total 1166036
[2026-01-09 18:00:51] -rw-r--r-- 2 boincer umatlas 392783492 Jan  9 10:13 ATLAS.root_0
[2026-01-09 18:00:51] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:13 start_atlas.sh
[2026-01-09 18:00:51] -rw-r--r-- 2 boincer umatlas    592610 Jan  9 10:13 input.tar.gz
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas 794483754 Jan  9 17:59 HITS.pool.root.1
[2026-01-09 18:00:51] -rw------- 1 boincer umatlas   6133760 Jan  9 18:00 result.tar.gz
18:00:53 (21997): run_atlas exited; CPU time 315559.971803
18:00:53 (21997): called boinc_finish(0)

</stderr_txt>
]]>

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