Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:19 (940362): wrapper (7.7.26015): starting
10:22:19 (940362): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:22:19] Arguments: --nthreads 8
[2026-01-09 10:22:19] Threads: 8
[2026-01-09 10:22:19] Checking for CVMFS
[2026-01-09 10:22:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:22:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:22:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:22:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:22:21] 2.13.3.0 6683 14162 168872 154948 0 400 32457413 40960000 20376 16776704 0 19731559 99.743 16181649 39994 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:22:21] CVMFS is ok
[2026-01-09 10:22:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:22:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:22:21] Further information can be found at the LHC@home message board.
[2026-01-09 10:22:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:22:21] Checking for apptainer binary...
[2026-01-09 10:22:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:22:21] Running /usr/bin/apptainer --version
[2026-01-09 10:22:21] apptainer version 1.4.5-2.el9
[2026-01-09 10:22:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:22:22] c-211-35-3.aglt2.org
[2026-01-09 10:22:22] apptainer works
[2026-01-09 10:22:22] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:22:22] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:22:22] Starting ATLAS job with PandaID=6963195844
[2026-01-09 10:22:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:23:32]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:23:32] 2026-01-10 20:22:33,986 | INFO     | monitor loop #6658: job 0:6963195844 is in state 'finished'
[2026-01-10 15:23:32] 2026-01-10 20:22:33,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:23:32] 2026-01-10 20:22:35,160 | INFO     | time since job start (104352s) is within the limit (349056.0s)
[2026-01-10 15:23:32] 2026-01-10 20:22:36,491 | INFO     | monitor loop #6659: job 0:6963195844 is in state 'finished'
[2026-01-10 15:23:32] 2026-01-10 20:22:36,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:23:32] 2026-01-10 20:22:37,166 | INFO     | time since job start (104354s) is within the limit (349056.0s)
[2026-01-10 15:23:32] 2026-01-10 20:22:38,996 | INFO     | monitor loop #6660: job 0:6963195844 is in state 'finished'
[2026-01-10 15:23:32] 2026-01-10 20:22:38,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:23:32] 2026-01-10 20:22:39,173 | INFO     | time since job start (104356s) is within the limit (349056.0s)
[2026-01-10 15:23:32] 2026-01-10 20:22:41,182 | INFO     | time since job start (104358s) is within the limit (349056.0s)
[2026-01-10 15:23:32] 2026-01-10 20:22:41,501 | INFO     | monitor loop #6661: job 0:6963195844 is in state 'finished'
[2026-01-10 15:23:32] 2026-01-10 20:22:41,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:23:32] 2026-01-10 20:22:42,607 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 15:23:32] 2026-01-10 20:22:42,620 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2630.7188125000002
[2026-01-10 15:23:32] 2026-01-10 20:22:42,680 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6963195844/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:23:32] 2026-01-10 20:22:42,681 | INFO     | extracted standard info from prmon json
[2026-01-10 15:23:32] 2026-01-10 20:22:42,681 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:23:32] 2026-01-10 20:22:42,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:23:32] 2026-01-10 20:22:42,817 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:23:32] 2026-01-10 20:22:42,821 | INFO     | sum of square deviations: 1547664121595.2495
[2026-01-10 15:23:32] 2026-01-10 20:22:42,881 | INFO     | sum of deviations: 8663738935243.92
[2026-01-10 15:23:32] 2026-01-10 20:22:42,881 | INFO     | mean x: 1768024426.5342305
[2026-01-10 15:23:32] 2026-01-10 20:22:42,881 | INFO     | mean y: 2707553.5564657697
[2026-01-10 15:23:32] 2026-01-10 20:22:42,882 | INFO     | intersect: -9894596292.21483
[2026-01-10 15:23:32] 2026-01-10 20:22:42,884 | INFO     | chi2: 22.24385618368555
[2026-01-10 15:23:32] 2026-01-10 20:22:42,886 | INFO     | sum of square deviations: 1534120332738.041
[2026-01-10 15:23:32] 2026-01-10 20:22:42,942 | INFO     | sum of deviations: 9172265149802.621
[2026-01-10 15:23:32] 2026-01-10 20:22:42,942 | INFO     | mean x: 1768024274.0416667
[2026-01-10 15:23:32] 2026-01-10 20:22:42,942 | INFO     | mean y: 2713277.4559859154
[2026-01-10 15:23:32] 2026-01-10 20:22:42,942 | INFO     | intersect: -10568026896.396177
[2026-01-10 15:23:32] 2026-01-10 20:22:42,944 | INFO     | chi2: 19.32517678872656
[2026-01-10 15:23:32] 2026-01-10 20:22:42,945 | INFO     | current chi2=19.32517678872656 (change=13.121283337102573 %)
[2026-01-10 15:23:32] 2026-01-10 20:22:42,945 | INFO     | right removable region: 1703
[2026-01-10 15:23:32] 2026-01-10 20:22:42,947 | INFO     | sum of square deviations: 1534117690828.0413
[2026-01-10 15:23:32] 2026-01-10 20:22:43,224 | INFO     | time since job start (104360s) is within the limit (349056.0s)
[2026-01-10 15:23:32] 2026-01-10 20:22:43,228 | INFO     | sum of deviations: 8038931442125.662
[2026-01-10 15:23:32] 2026-01-10 20:22:43,228 | INFO     | mean x: 1768024579.0416667
[2026-01-10 15:23:32] 2026-01-10 20:22:43,252 | INFO     | mean y: 2714586.723004695
[2026-01-10 15:23:32] 2026-01-10 20:22:43,252 | INFO     | intersect: -9261912543.179623
[2026-01-10 15:23:32] 2026-01-10 20:22:43,254 | INFO     | chi2: 18.21133688412248
[2026-01-10 15:23:32] 2026-01-10 20:22:43,254 | INFO     | current chi2=18.21133688412248 (change=18.128688057786785 %)
[2026-01-10 15:23:32] 2026-01-10 20:22:43,255 | INFO     | left removable region: 10
[2026-01-10 15:23:32] 2026-01-10 20:22:43,275 | INFO     | sum of square deviations: 1504597371679.5203
[2026-01-10 15:23:32] 2026-01-10 20:22:43,512 | INFO     | sum of deviations: 8062991348810.011
[2026-01-10 15:23:32] 2026-01-10 20:22:43,513 | INFO     | mean x: 1768024548.5581808
[2026-01-10 15:23:32] 2026-01-10 20:22:43,513 | INFO     | mean y: 2727038.9238038985
[2026-01-10 15:23:32] 2026-01-10 20:22:43,513 | INFO     | intersect: -9471944994.827946
[2026-01-10 15:23:32] 2026-01-10 20:22:43,515 | INFO     | chi2: 12.240904921078565
[2026-01-10 15:23:32] 2026-01-10 20:22:43,535 | INFO     | current memory leak: 5.36 B/s (using 1693 data points, chi2=12.24)
[2026-01-10 15:23:32] 2026-01-10 20:22:43,536 | INFO     | could have reported an average CPU frequency of 2685 MHz (60 samples)
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | ..............................
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | . Timing measurements:
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | . get job = 0 s
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | . initial setup = 6 s
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | . payload setup = 37 s
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | . stage-in = 0 s
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | . payload execution = 104235 s
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | . stage-out = 4 s
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | . log creation = 0 s
[2026-01-10 15:23:32] 2026-01-10 20:22:43,537 | INFO     | ..............................
[2026-01-10 15:23:32] 2026-01-10 20:22:43,997 | INFO     | 
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | job summary report
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | --------------------------------------------------
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | PanDA job id: 6963195844
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | task id: 47962010
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | errors: (none)
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | pilot state: finished 
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | transexitcode: 0
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | exeerrorcode: 0
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | exeerrordiag: 
[2026-01-10 15:23:32] 2026-01-10 20:22:43,998 | INFO     | exitcode: 0
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | exitmsg: OK
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | cpuconsumptiontime: 143183 s
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | nevents: 450
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | neventsw: 0
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | pid: 952091
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | pgrp: 952091
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | corecount: 8
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | event service: False
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | sizes: {0: 2283792, 1: 2284477, 2: 2284676, 13: 2284676, 25: 2284732, 27: 2285022, 36: 2285178, 104276: 2359795, 104281: 2368789, 104285: 2368845, 104299: 2369091}
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | --------------------------------------------------
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | 
[2026-01-10 15:23:32] 2026-01-10 20:22:43,999 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,053 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:23:32] 2026-01-10 20:22:44,054 | INFO     | job 6963195844 has completed (purged errors)
[2026-01-10 15:23:32] 2026-01-10 20:22:44,054 | INFO     | overall cleanup function is called
[2026-01-10 15:23:32] 2026-01-10 20:22:44,767 | INFO     | PID=944534 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 15:23:32] 2026-01-10 20:22:44,767 | INFO     | .. there are 14 such processes running
[2026-01-10 15:23:32] 2026-01-10 20:22:45,069 | INFO     | --- collectZombieJob: --- 10, [952091]
[2026-01-10 15:23:32] 2026-01-10 20:22:45,070 | INFO     | zombie collector waiting for pid 952091
[2026-01-10 15:23:32] 2026-01-10 20:22:45,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:23:32] 2026-01-10 20:22:45,070 | INFO     | collected zombie processes
[2026-01-10 15:23:32] 2026-01-10 20:22:45,070 | INFO     | will attempt to kill all subprocesses of pid=952091
[2026-01-10 15:23:32] 2026-01-10 20:22:45,427 | INFO     | process IDs to be killed: [952091] (in reverse order)
[2026-01-10 15:23:32] 2026-01-10 20:22:45,639 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:23:32] 2026-01-10 20:22:45,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:23:32] 2026-01-10 20:22:45,696 | INFO     | did not find any defunct processes belonging to 952091
[2026-01-10 15:23:32] 2026-01-10 20:22:45,708 | INFO     | did not find any defunct processes belonging to 952091
[2026-01-10 15:23:32] 2026-01-10 20:22:45,708 | INFO     | ready for new job
[2026-01-10 15:23:32] 2026-01-10 20:22:45,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:23:32] 2026-01-10 20:22:45,715 | INFO     | ***************************************
[2026-01-10 15:23:32] 2026-01-10 20:22:45,715 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:23:32] 2026-01-10 20:22:45,716 | INFO     | ***************************************
[2026-01-10 15:23:32] 2026-01-10 20:22:45,716 | INFO     | 
[2026-01-10 15:23:32] 2026-01-10 20:22:45,721 | INFO     | architecture information:
[2026-01-10 15:23:32] 2026-01-10 20:22:45,722 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:23:32] 2026-01-10 20:22:45,770 | INFO     | cat /etc/os-release:
[2026-01-10 15:23:32] NAME="CentOS Linux"
[2026-01-10 15:23:32] VERSION="7 (Core)"
[2026-01-10 15:23:32] ID="centos"
[2026-01-10 15:23:32] ID_LIKE="rhel fedora"
[2026-01-10 15:23:32] VERSION_ID="7"
[2026-01-10 15:23:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:23:32] ANSI_COLOR="0;31"
[2026-01-10 15:23:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:23:32] HOME_URL="https://www.centos.org/"
[2026-01-10 15:23:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:23:32] 
[2026-01-10 15:23:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:23:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:23:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:23:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:23:32] 
[2026-01-10 15:23:32] 2026-01-10 20:22:45,770 | INFO     | ***************************************
[2026-01-10 15:23:32] 2026-01-10 20:22:46,274 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 15:23:32] 2026-01-10 20:22:46,389 | INFO     | sufficient remaining disk space (128041615360 B)
[2026-01-10 15:23:32] 2026-01-10 20:22:46,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:23:32] 2026-01-10 20:22:46,389 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:23:32] 2026-01-10 20:22:46,390 | INFO     | update_server=False
[2026-01-10 15:23:32] 2026-01-10 20:22:46,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:23:32] 2026-01-10 20:22:46,527 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 15:23:32] 2026-01-10 20:22:46,528 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 15:23:32] 2026-01-10 20:22:46,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:23:32] 2026-01-10 20:22:46,528 | INFO     | will abort loop
[2026-01-10 15:23:32] 2026-01-10 20:22:46,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:23:32] 2026-01-10 20:22:46,773 | INFO     | all data control threads have been joined
[2026-01-10 15:23:32] 2026-01-10 20:22:46,848 | INFO     | all job control threads have been joined
[2026-01-10 15:23:32] 2026-01-10 20:22:47,009 | INFO     | all payload control threads have been joined
[2026-01-10 15:23:32] 2026-01-10 20:22:47,397 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:47,534 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:47,782 | INFO     | [data] control thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:47,789 | INFO     | [job] validate thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:47,828 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:47,857 | INFO     | [job] control thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:47,863 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:47,887 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:48,003 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:48,015 | INFO     | [payload] control thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:48,060 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:48,154 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:48,638 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:48,820 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:49,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:23:32] 2026-01-10 20:22:49,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:23:32] 2026-01-10 20:22:50,019 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:22:53,462 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:23:32] 2026-01-10 20:23:18,141 | INFO     | PID=944534 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 15:23:32] 2026-01-10 20:23:18,141 | INFO     | .. there are 14 such processes running
[2026-01-10 15:23:32] 2026-01-10 20:23:18,142 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:23:32] 2026-01-10 20:23:18,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:23:32] 2026-01-10 20:23:18,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:23:32] 2026-01-10 20:23:24,995 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:23:32] 2026-01-10 20:23:26,005 [wrapper] supervise_pilot (15 min periods counter: 117)
[2026-01-10 15:23:32] 2026-01-10 20:23:26,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504199325504)>', '<ExcThread(monitor, started 140503832041216)>']
[2026-01-10 15:23:32] 2026-01-10 20:23:27,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:23:32] 2026-01-10 20:23:27,196 | INFO     | [monitor] control thread has ended
[2026-01-10 15:23:32] 2026-01-10 20:23:31,341 | INFO     | all workflow threads have been joined
[2026-01-10 15:23:32] 2026-01-10 20:23:31,342 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:23:32] 2026-01-10 20:23:31,342 | INFO     | traces error code: 0
[2026-01-10 15:23:32] 2026-01-10 20:23:31,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:23:32] 2026-01-10 20:23:31,964 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:23:32] 2026-01-10 20:23:31,988 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:23:32] 2026-01-10 20:23:32,022 [wrapper] pilotpid: 944534
[2026-01-10 15:23:32] 2026-01-10 20:23:32,032 [wrapper] Pilot exit status: 0
[2026-01-10 15:23:32] 2026-01-10 20:23:32,097 [wrapper] pandaids: 6963195844
[2026-01-10 15:23:32] 2026-01-10 20:23:32,170 [wrapper] cleanup supervisor_pilot 4160008 944535
[2026-01-10 15:23:32] 2026-01-10 20:23:32,173 [wrapper] Test setup, not cleaning
[2026-01-10 15:23:32] 2026-01-10 20:23:32,175 [wrapper] apfmon messages muted
[2026-01-10 15:23:32] 2026-01-10 20:23:32,178 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:23:32] 2026-01-10 20:23:32,199 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:23:32]  *** Error codes and diagnostics ***
[2026-01-10 15:23:32]     "exeErrorCode": 0,
[2026-01-10 15:23:32]     "exeErrorDiag": "",
[2026-01-10 15:23:32]     "pilotErrorCode": 0,
[2026-01-10 15:23:32]     "pilotErrorDiag": "",
[2026-01-10 15:23:32]  *** Listing of results directory ***
[2026-01-10 15:23:32] total 810280
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 15:23:32] -rwx------. 1 boincer umatlas     36322 Jan  9 02:13 runpilot2-wrapper.sh
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:23:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:22 run_atlas
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:22 job.xml
[2026-01-10 15:23:32] -rw-r--r--. 2 boincer umatlas 393484406 Jan  9 10:22 EVNT.47962006._000060.pool.root.1
[2026-01-10 15:23:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:22 start_atlas.sh
[2026-01-10 15:23:32] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:22 shared
[2026-01-10 15:23:32] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 10:22 input.tar.gz
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:22 boinc_lockfile
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 10:22 pandaJob.out
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas        57 Jan  9 10:22 setup.sh.local
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas    989377 Jan  9 10:23 agis_schedconf.cvmfs.json
[2026-01-10 15:23:32] drwx------. 5 boincer umatlas      4096 Jan  9 10:23 pilot3
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas       534 Jan 10 14:51 boinc_task_state.xml
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas 400085154 Jan 10 15:21 HITS.47962010._000675.pool.root.1
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas      6861 Jan 10 15:22 init_data.xml
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas      1052 Jan 10 15:22 memory_monitor_summary.json
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas   1516240 Jan 10 15:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas   2539451 Jan 10 15:22 log.47962010._000675.job.log.tgz.1
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas      8630 Jan 10 15:22 heartbeat.json
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas        30 Jan 10 15:23 wrapper_checkpoint.txt
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 15:23 boinc_mmap_file
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas        95 Jan 10 15:23 pilot_heartbeat.json
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas      5010 Jan 10 15:23 pilotlog.txt
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas  13575745 Jan 10 15:23 log.47962010._000675.job.log.1
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas       353 Jan 10 15:23 output.list
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas       620 Jan 10 15:23 runtime_log
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas  16138240 Jan 10 15:23 result.tar.gz
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas      9354 Jan 10 15:23 runtime_log.err
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas       664 Jan 10 15:23 rLKMDm4rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSRmKDmbigavn.diag
[2026-01-10 15:23:32] -rw-r--r--. 1 boincer umatlas     21741 Jan 10 15:23 stderr.txt
[2026-01-10 15:23:32] HITS file was successfully produced:
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas 400085154 Jan 10 15:21 shared/HITS.pool.root.1
[2026-01-10 15:23:32]  *** Contents of shared directory: ***
[2026-01-10 15:23:32] total 791340
[2026-01-10 15:23:32] -rw-r--r--. 2 boincer umatlas 393484406 Jan  9 10:22 ATLAS.root_0
[2026-01-10 15:23:32] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:22 start_atlas.sh
[2026-01-10 15:23:32] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 10:22 input.tar.gz
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas 400085154 Jan 10 15:21 HITS.pool.root.1
[2026-01-10 15:23:32] -rw-------. 1 boincer umatlas  16138240 Jan 10 15:23 result.tar.gz
15:23:34 (940362): run_atlas exited; CPU time 145194.783788
15:23:34 (940362): called boinc_finish(0)

</stderr_txt>
]]>

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