Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:09:48 (3446630): wrapper (7.7.26015): starting
09:09:48 (3446630): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 09:09:48] Arguments: --nthreads 12
[2026-01-09 09:09:48] Threads: 12
[2026-01-09 09:09:48] Checking for CVMFS
[2026-01-09 09:09:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:09:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:09:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:09:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:09:53] 2.13.3.0 3446882 0 29732 154947 3 1 4388852 6144000 0 130560 0 0 0.000 1336 754 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 09:09:53] CVMFS is ok
[2026-01-09 09:09:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:09:53] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 09:09:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 09:09:53] Further information can be found at the LHC@home message board.
[2026-01-09 09:09:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:09:53] Checking for apptainer binary...
[2026-01-09 09:09:53] apptainer is not installed, using version from CVMFS
[2026-01-09 09:09:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:09:53] ace
[2026-01-09 09:09:53] apptainer works
[2026-01-09 09:09:53] Set ATHENA_PROC_NUMBER=12
[2026-01-09 09:09:53] Set ATHENA_CORE_NUMBER=12
[2026-01-09 09:09:53] Starting ATLAS job with PandaID=6963375726
[2026-01-09 09:09:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:13:21 (3507438): wrapper (7.7.26015): starting
12:13:21 (3507438): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 12:13:21] Arguments: --nthreads 12
[2026-01-09 12:13:21] Threads: 12
[2026-01-09 12:13:21] This job has been restarted, cleaning up previous attempt
[2026-01-09 12:13:21] Checking for CVMFS
[2026-01-09 12:13:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:13:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:13:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:13:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:13:24] 2.13.3.0 3507814 0 29712 154951 3 1 4433620 6144001 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 12:13:24] CVMFS is ok
[2026-01-09 12:13:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:13:24] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 12:13:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 12:13:24] Further information can be found at the LHC@home message board.
[2026-01-09 12:13:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:13:24] Checking for apptainer binary...
[2026-01-09 12:13:24] apptainer is not installed, using version from CVMFS
[2026-01-09 12:13:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:13:24] ace
[2026-01-09 12:13:24] apptainer works
[2026-01-09 12:13:24] Set ATHENA_PROC_NUMBER=12
[2026-01-09 12:13:24] Set ATHENA_CORE_NUMBER=12
[2026-01-09 12:13:24] Starting ATLAS job with PandaID=6963375726
[2026-01-09 12:13:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:34:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:34:46] 2026-01-10 02:34:06,002 | INFO     | number of running child processes to parent process 3518630: 1
[2026-01-09 20:34:46] 2026-01-10 02:34:06,003 | INFO     | maximum number of monitored processes: 20
[2026-01-09 20:34:46] 2026-01-10 02:34:06,679 | INFO     | time since job start (30028s) is within the limit (349056.0s)
[2026-01-09 20:34:46] 2026-01-10 02:34:06,803 | INFO     | job 6963375726 has state=finished
[2026-01-09 20:34:46] 2026-01-10 02:34:06,804 | INFO     | preparing for final server update for job 6963375726 in state='finished'
[2026-01-09 20:34:46] 2026-01-10 02:34:06,805 | INFO     | this job has now completed (state=finished)
[2026-01-09 20:34:46] 2026-01-10 02:34:06,805 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 20:34:46] 2026-01-10 02:34:06,805 | INFO     | log transfer has been attempted: DONE
[2026-01-09 20:34:46] 2026-01-10 02:34:06,805 | INFO     | job 6963375726 has finished - writing final server update
[2026-01-09 20:34:46] 2026-01-10 02:34:06,805 | INFO     | total number of processed events: 900 (read)
[2026-01-09 20:34:46] 2026-01-10 02:34:06,807 | INFO     | executing command: lscpu
[2026-01-09 20:34:46] 2026-01-10 02:34:06,835 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 20:34:46] 2026-01-10 02:34:08,507 | INFO     | monitor loop #2201: job 0:6963375726 is in state 'finished'
[2026-01-09 20:34:46] 2026-01-10 02:34:08,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:34:46] 2026-01-10 02:34:08,684 | INFO     | time since job start (30030s) is within the limit (349056.0s)
[2026-01-09 20:34:46] 2026-01-10 02:34:10,687 | INFO     | time since job start (30032s) is within the limit (349056.0s)
[2026-01-09 20:34:46] 2026-01-10 02:34:11,011 | INFO     | monitor loop #2202: job 0:6963375726 is in state 'finished'
[2026-01-09 20:34:46] 2026-01-10 02:34:11,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:34:46] 2026-01-10 02:34:12,691 | INFO     | time since job start (30034s) is within the limit (349056.0s)
[2026-01-09 20:34:46] 2026-01-10 02:34:12,924 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:34:46] 2026-01-10 02:34:12,927 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2683.0765625
[2026-01-09 20:34:46] 2026-01-10 02:34:12,930 | INFO     | using path: /var/lib/boinc-client/slots/17/PanDA_Pilot-6963375726/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:34:46] 2026-01-10 02:34:12,930 | INFO     | extracted standard info from prmon json
[2026-01-09 20:34:46] 2026-01-10 02:34:12,931 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:34:46] 2026-01-10 02:34:12,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:34:46] 2026-01-10 02:34:12,936 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:34:46] 2026-01-10 02:34:12,937 | INFO     | sum of square deviations: 36929307596.70732
[2026-01-09 20:34:46] 2026-01-10 02:34:12,940 | INFO     | sum of deviations: 13776707393518.588
[2026-01-09 20:34:46] 2026-01-10 02:34:12,940 | INFO     | mean x: 1767997414.4756098
[2026-01-09 20:34:46] 2026-01-10 02:34:12,940 | INFO     | mean y: 6058359.882113821
[2026-01-09 20:34:46] 2026-01-10 02:34:12,940 | INFO     | intersect: -659556349842.4209
[2026-01-09 20:34:46] 2026-01-10 02:34:12,940 | INFO     | chi2: 324.7781264901198
[2026-01-09 20:34:46] 2026-01-10 02:34:12,940 | INFO     | sum of square deviations: 35814958676.899124
[2026-01-09 20:34:46] 2026-01-10 02:34:12,943 | INFO     | sum of deviations: 14114743460247.203
[2026-01-09 20:34:46] 2026-01-10 02:34:12,943 | INFO     | mean x: 1767997261.9856262
[2026-01-09 20:34:46] 2026-01-10 02:34:12,943 | INFO     | mean y: 6104568.60164271
[2026-01-09 20:34:46] 2026-01-10 02:34:12,943 | INFO     | intersect: -696764985312.415
[2026-01-09 20:34:46] 2026-01-10 02:34:12,944 | INFO     | chi2: 609.0881700151647
[2026-01-09 20:34:46] 2026-01-10 02:34:12,944 | INFO     | current chi2=609.0881700151647 (change=-87.53977572245586 %)
[2026-01-09 20:34:46] 2026-01-10 02:34:12,944 | INFO     | right removable region: 486
[2026-01-09 20:34:46] 2026-01-10 02:34:12,944 | INFO     | sum of square deviations: 35814695645.8685
[2026-01-09 20:34:46] 2026-01-10 02:34:12,947 | INFO     | sum of deviations: 13413851236802.027
[2026-01-09 20:34:46] 2026-01-10 02:34:12,947 | INFO     | mean x: 1767997566.983573
[2026-01-09 20:34:46] 2026-01-10 02:34:12,947 | INFO     | mean y: 6107960.377823409
[2026-01-09 20:34:46] 2026-01-10 02:34:12,947 | INFO     | intersect: -662170574623.8663
[2026-01-09 20:34:46] 2026-01-10 02:34:12,947 | INFO     | chi2: 329.32253332448556
[2026-01-09 20:34:46] 2026-01-10 02:34:12,947 | INFO     | current chi2=329.32253332448556 (change=-1.399234266013295 %)
[2026-01-09 20:34:46] 2026-01-10 02:34:12,947 | INFO     | left removable region: 10
[2026-01-09 20:34:46] 2026-01-10 02:34:12,947 | INFO     | sum of square deviations: 33442388010.99159
[2026-01-09 20:34:46] 2026-01-10 02:34:12,950 | INFO     | sum of deviations: 13513359531762.412
[2026-01-09 20:34:46] 2026-01-10 02:34:12,950 | INFO     | mean x: 1767997536.4957983
[2026-01-09 20:34:46] 2026-01-10 02:34:12,950 | INFO     | mean y: 6191635.455882353
[2026-01-09 20:34:46] 2026-01-10 02:34:12,950 | INFO     | intersect: -714404105681.9921
[2026-01-09 20:34:46] 2026-01-10 02:34:12,950 | INFO     | chi2: 700.903887803228
[2026-01-09 20:34:46] 2026-01-10 02:34:12,950 | INFO     | current memory leak: 404.08 B/s (using 476 data points, chi2=700.90)
[2026-01-09 20:34:46] 2026-01-10 02:34:12,951 | INFO     | could have reported an average CPU frequency of 2302 MHz (20 samples)
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | ..............................
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | . Timing measurements:
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | . get job = 0 s
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | . initial setup = 2 s
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | . payload setup = 3 s
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | . stage-in = 0 s
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | . payload execution = 30002 s
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | . stage-out = 3 s
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | . log creation = 0 s
[2026-01-09 20:34:46] 2026-01-10 02:34:12,952 | INFO     | ..............................
[2026-01-09 20:34:46] 2026-01-10 02:34:13,012 | INFO     | 
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | job summary report
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | --------------------------------------------------
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | PanDA job id: 6963375726
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | task id: 47962010
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | errors: (none)
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | pilot state: finished 
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | transexitcode: 0
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | exeerrorcode: 0
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | exeerrordiag: 
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | exitcode: 0
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | exitmsg: OK
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | cpuconsumptiontime: 348691 s
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | nevents: 900
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | neventsw: 0
[2026-01-09 20:34:46] 2026-01-10 02:34:13,013 | INFO     | pid: 3518630
[2026-01-09 20:34:46] 2026-01-10 02:34:13,014 | INFO     | pgrp: 3518630
[2026-01-09 20:34:46] 2026-01-10 02:34:13,014 | INFO     | corecount: 12
[2026-01-09 20:34:46] 2026-01-10 02:34:13,014 | INFO     | event service: False
[2026-01-09 20:34:46] 2026-01-10 02:34:13,014 | INFO     | sizes: {0: 2284628, 2: 2284890, 11: 2284918, 30009: 2324173, 30013: 2333239, 30021: 2333457}
[2026-01-09 20:34:46] 2026-01-10 02:34:13,014 | INFO     | --------------------------------------------------
[2026-01-09 20:34:46] 2026-01-10 02:34:13,014 | INFO     | 
[2026-01-09 20:34:46] 2026-01-10 02:34:13,014 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/17
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | job 6963375726 has completed (purged errors)
[2026-01-09 20:34:46] 2026-01-10 02:34:13,037 | INFO     | overall cleanup function is called
[2026-01-09 20:34:46] 2026-01-10 02:34:14,055 | INFO     | --- collectZombieJob: --- 10, [3518630]
[2026-01-09 20:34:46] 2026-01-10 02:34:14,055 | INFO     | zombie collector waiting for pid 3518630
[2026-01-09 20:34:46] 2026-01-10 02:34:14,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:34:46] 2026-01-10 02:34:14,055 | INFO     | collected zombie processes
[2026-01-09 20:34:46] 2026-01-10 02:34:14,055 | INFO     | will attempt to kill all subprocesses of pid=3518630
[2026-01-09 20:34:46] 2026-01-10 02:34:14,158 | INFO     | process IDs to be killed: [3518630] (in reverse order)
[2026-01-09 20:34:46] 2026-01-10 02:34:14,213 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:34:46] 2026-01-10 02:34:14,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:34:46] 2026-01-10 02:34:14,219 | INFO     | did not find any defunct processes belonging to 3518630
[2026-01-09 20:34:46] 2026-01-10 02:34:14,223 | INFO     | did not find any defunct processes belonging to 3518630
[2026-01-09 20:34:46] 2026-01-10 02:34:14,224 | INFO     | ready for new job
[2026-01-09 20:34:46] 2026-01-10 02:34:14,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:34:46] 2026-01-10 02:34:14,226 | INFO     | ***************************************
[2026-01-09 20:34:46] 2026-01-10 02:34:14,226 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:34:46] 2026-01-10 02:34:14,226 | INFO     | ***************************************
[2026-01-09 20:34:46] 2026-01-10 02:34:14,227 | INFO     | 
[2026-01-09 20:34:46] 2026-01-10 02:34:14,228 | INFO     | architecture information:
[2026-01-09 20:34:46] 2026-01-10 02:34:14,229 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:34:46] 2026-01-10 02:34:14,249 | INFO     | cat /etc/os-release:
[2026-01-09 20:34:46] NAME="CentOS Linux"
[2026-01-09 20:34:46] VERSION="7 (Core)"
[2026-01-09 20:34:46] ID="centos"
[2026-01-09 20:34:46] ID_LIKE="rhel fedora"
[2026-01-09 20:34:46] VERSION_ID="7"
[2026-01-09 20:34:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:34:46] ANSI_COLOR="0;31"
[2026-01-09 20:34:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:34:46] HOME_URL="https://www.centos.org/"
[2026-01-09 20:34:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:34:46] 
[2026-01-09 20:34:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:34:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:34:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:34:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:34:46] 
[2026-01-09 20:34:46] 2026-01-10 02:34:14,250 | INFO     | ***************************************
[2026-01-09 20:34:46] 2026-01-10 02:34:14,753 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/17
[2026-01-09 20:34:46] 2026-01-10 02:34:14,778 | INFO     | sufficient remaining disk space (16270753792 B)
[2026-01-09 20:34:46] 2026-01-10 02:34:14,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:34:46] 2026-01-10 02:34:14,778 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:34:46] 2026-01-10 02:34:14,779 | INFO     | update_server=False
[2026-01-09 20:34:46] 2026-01-10 02:34:14,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:34:46] 2026-01-10 02:34:14,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:34:46] 2026-01-10 02:34:14,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:34:46] 2026-01-10 02:34:14,779 | INFO     | aborting loop
[2026-01-09 20:34:46] 2026-01-10 02:34:14,811 | INFO     | all payload control threads have been joined
[2026-01-09 20:34:46] 2026-01-10 02:34:15,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:34:46] 2026-01-10 02:34:15,342 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:34:46] 2026-01-10 02:34:15,525 | INFO     | all job control threads have been joined
[2026-01-09 20:34:46] 2026-01-10 02:34:15,755 | INFO     | all data control threads have been joined
[2026-01-09 20:34:46] 2026-01-10 02:34:15,783 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:15,783 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:15,784 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:15,817 | INFO     | [payload] control thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,319 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,344 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,531 | INFO     | [job] control thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,695 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,760 | INFO     | [data] control thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,768 | INFO     | [job] validate thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,771 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,815 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:16,887 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:17,214 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:17,292 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:19,347 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:34:46] 2026-01-10 02:34:28,108 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:34:46] 2026-01-10 02:34:29,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139669159282496)>', '<ExcThread(monitor, started 139668595119872)>']
[2026-01-09 20:34:46] 2026-01-10 02:34:34,412 | INFO     | all workflow threads have been joined
[2026-01-09 20:34:46] 2026-01-10 02:34:34,412 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:34:46] 2026-01-10 02:34:34,412 | INFO     | traces error code: 0
[2026-01-09 20:34:46] 2026-01-10 02:34:34,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:34:46] 2026-01-10 02:34:45,921 | INFO     | PID=3512035 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:34:46] 2026-01-10 02:34:45,923 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:34:46] 2026-01-10 02:34:45,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:34:46] 2026-01-10 02:34:45,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:34:46] 2026-01-10 02:34:45,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:34:46] 2026-01-10 02:34:45,923 | INFO     | [monitor] control thread has ended
[2026-01-09 20:34:46] 2026-01-10 02:34:46,201 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:34:46] 2026-01-10 02:34:46,204 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:34:46] 2026-01-10 02:34:46,206 [wrapper] pilotpid: 3512035
[2026-01-09 20:34:46] 2026-01-10 02:34:46,208 [wrapper] Pilot exit status: 0
[2026-01-09 20:34:46] 2026-01-10 02:34:46,220 [wrapper] pandaids: 6963375726 6963375726
[2026-01-09 20:34:46] 2026-01-10 02:34:46,254 [wrapper] cleanup supervisor_pilot 3655899 3512036
[2026-01-09 20:34:46] 2026-01-10 02:34:46,257 [wrapper] Test setup, not cleaning
[2026-01-09 20:34:46] 2026-01-10 02:34:46,260 [wrapper] apfmon messages muted
[2026-01-09 20:34:46] 2026-01-10 02:34:46,263 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:34:46] 2026-01-10 02:34:46,266 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:34:46]  *** Error codes and diagnostics ***
[2026-01-09 20:34:46]     "exeErrorCode": 0,
[2026-01-09 20:34:46]     "exeErrorDiag": "",
[2026-01-09 20:34:46]     "pilotErrorCode": 0,
[2026-01-09 20:34:46]     "pilotErrorDiag": "",
[2026-01-09 20:34:46]  *** Listing of results directory ***
[2026-01-09 20:34:46] total 1559664
[2026-01-09 20:34:46] drwx------ 5 boinc boinc      4096 Dec  3 08:30 pilot3
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:13 pilot3.tar.gz
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:13 queuedata.json
[2026-01-09 20:34:46] -rwx------ 1 boinc boinc     36322 Jan  9 01:14 runpilot2-wrapper.sh
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc       100 Jan  9 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:34:46] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 09:09 run_atlas
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc       105 Jan  9 09:09 job.xml
[2026-01-09 20:34:46] -rw-r--r-- 3 boinc boinc 392040655 Jan  9 09:09 EVNT.47962006._000072.pool.root.1
[2026-01-09 20:34:46] -rw-r--r-- 3 boinc boinc 392040655 Jan  9 09:09 ATLAS.root_0
[2026-01-09 20:34:46] -rw-r--r-- 2 boinc boinc     15847 Jan  9 09:09 start_atlas.sh
[2026-01-09 20:34:46] drwxrwx--x 2 boinc boinc      4096 Jan  9 09:09 shared
[2026-01-09 20:34:46] -rw-r--r-- 2 boinc boinc    592615 Jan  9 09:09 input.tar.gz
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc         0 Jan  9 09:09 boinc_lockfile
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc      6996 Jan  9 12:13 init_data.xml
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc      2891 Jan  9 12:13 pandaJob.out
[2026-01-09 20:34:46] -rw------- 1 boinc boinc    989356 Jan  9 12:13 agis_schedconf.cvmfs.json
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc       532 Jan  9 20:25 boinc_task_state.xml
[2026-01-09 20:34:46] -rw------- 1 boinc boinc 796323897 Jan  9 20:33 HITS.47962010._000923.pool.root.1
[2026-01-09 20:34:46] -rw------- 1 boinc boinc      1063 Jan  9 20:33 memory_monitor_summary.json
[2026-01-09 20:34:46] -rw------- 1 boinc boinc   1516240 Jan  9 20:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:34:46] -rw------- 1 boinc boinc   2184684 Jan  9 20:34 log.47962010._000923.job.log.tgz.1
[2026-01-09 20:34:46] -rw------- 1 boinc boinc      8639 Jan  9 20:34 heartbeat.json
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc        29 Jan  9 20:34 wrapper_checkpoint.txt
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc      8192 Jan  9 20:34 boinc_mmap_file
[2026-01-09 20:34:46] -rw------- 1 boinc boinc       747 Jan  9 20:34 pilotlog.txt
[2026-01-09 20:34:46] -rw------- 1 boinc boinc        97 Jan  9 20:34 pilot_heartbeat.json
[2026-01-09 20:34:46] -rw------- 1 boinc boinc   4196351 Jan  9 20:34 log.47962010._000923.job.log.1
[2026-01-09 20:34:46] -rw------- 1 boinc boinc       353 Jan  9 20:34 output.list
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc       620 Jan  9 20:34 runtime_log
[2026-01-09 20:34:46] -rw------- 1 boinc boinc   6400000 Jan  9 20:34 result.tar.gz
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc      8970 Jan  9 20:34 runtime_log.err
[2026-01-09 20:34:46] -rw------- 1 boinc boinc       778 Jan  9 20:34 JgSMDmFsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAGhKDmNZ8Rom.diag
[2026-01-09 20:34:46] -rw-r--r-- 1 boinc boinc     23898 Jan  9 20:34 stderr.txt
[2026-01-09 20:34:46] HITS file was successfully produced:
[2026-01-09 20:34:46] -rw------- 1 boinc boinc 796323897 Jan  9 20:33 shared/HITS.pool.root.1
[2026-01-09 20:34:46]  *** Contents of shared directory: ***
[2026-01-09 20:34:46] total 1167376
[2026-01-09 20:34:46] -rw-r--r-- 3 boinc boinc 392040655 Jan  9 09:09 ATLAS.root_0
[2026-01-09 20:34:46] -rw-r--r-- 2 boinc boinc     15847 Jan  9 09:09 start_atlas.sh
[2026-01-09 20:34:46] -rw-r--r-- 2 boinc boinc    592615 Jan  9 09:09 input.tar.gz
[2026-01-09 20:34:46] -rw------- 1 boinc boinc 796323897 Jan  9 20:33 HITS.pool.root.1
[2026-01-09 20:34:46] -rw------- 1 boinc boinc   6400000 Jan  9 20:34 result.tar.gz
20:34:47 (3507438): run_atlas exited; CPU time 348075.041376
20:34:47 (3507438): called boinc_finish(0)

</stderr_txt>
]]>

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