Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:57:40 (1136): wrapper (7.7.26015): starting
18:57:40 (1136): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:57:40] Arguments: --nthreads 8
[2026-01-09 18:57:40] Threads: 8
[2026-01-09 18:57:40] Checking for CVMFS
[2026-01-09 18:57:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:57:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:57:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:57:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:57:41] 2.11.2.0 18097 35744 121256 154951 1 57 20020349 25165825 0 130560 0 15121320 99.750 12812176 2607 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 18:57:41] CVMFS is ok
[2026-01-09 18:57:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:57:41] Checking for apptainer binary...
[2026-01-09 18:57:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:57:41] Running /usr/bin/apptainer --version
[2026-01-09 18:57:41] apptainer version 1.3.2-1.el7
[2026-01-09 18:57:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:57:42] cg-vwn387.simple-grid.lan
[2026-01-09 18:57:42] apptainer works
[2026-01-09 18:57:42] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:57:42] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:57:42] Starting ATLAS job with PandaID=6963195801
[2026-01-09 18:57:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:29:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:29:04] 2026-01-10 03:28:11,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:29:04] 2026-01-10 03:28:13,146 | INFO     | time since job start (34216s) is within the limit (349056.0s)
[2026-01-10 04:29:04] 2026-01-10 03:28:14,305 | INFO     | monitor loop #2317: job 0:6963195801 is in state 'finished'
[2026-01-10 04:29:04] 2026-01-10 03:28:14,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:29:04] 2026-01-10 03:28:15,156 | INFO     | time since job start (34218s) is within the limit (349056.0s)
[2026-01-10 04:29:04] 2026-01-10 03:28:16,810 | INFO     | monitor loop #2318: job 0:6963195801 is in state 'finished'
[2026-01-10 04:29:04] 2026-01-10 03:28:16,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:29:04] 2026-01-10 03:28:17,162 | INFO     | time since job start (34220s) is within the limit (349056.0s)
[2026-01-10 04:29:04] 2026-01-10 03:28:18,269 | INFO     | PID=4866 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 04:29:04] 2026-01-10 03:28:18,269 | INFO     | .. there are 2 such processes running
[2026-01-10 04:29:04] 2026-01-10 03:28:19,270 | INFO     | time since job start (34222s) is within the limit (349056.0s)
[2026-01-10 04:29:04] 2026-01-10 03:28:19,321 | INFO     | monitor loop #2319: job 0:6963195801 is in state 'finished'
[2026-01-10 04:29:04] 2026-01-10 03:28:19,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:29:04] 2026-01-10 03:28:21,279 | INFO     | time since job start (34224s) is within the limit (349056.0s)
[2026-01-10 04:29:04] 2026-01-10 03:28:21,826 | INFO     | monitor loop #2320: job 0:6963195801 is in state 'finished'
[2026-01-10 04:29:04] 2026-01-10 03:28:21,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,249 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 04:29:04] 2026-01-10 03:28:22,250 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 04:29:04] 2026-01-10 03:28:22,252 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6963195801/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,253 | INFO     | extracted standard info from prmon json
[2026-01-10 04:29:04] 2026-01-10 03:28:22,253 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:29:04] 2026-01-10 03:28:22,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:29:04] 2026-01-10 03:28:22,272 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:29:04] 2026-01-10 03:28:22,273 | INFO     | sum of square deviations: 54166959401.74997
[2026-01-10 04:29:04] 2026-01-10 03:28:22,283 | INFO     | sum of deviations: -374435989104.98737
[2026-01-10 04:29:04] 2026-01-10 03:28:22,283 | INFO     | mean x: 1767998530.7316637
[2026-01-10 04:29:04] 2026-01-10 03:28:22,283 | INFO     | mean y: 2712501.5134168155
[2026-01-10 04:29:04] 2026-01-10 03:28:22,283 | INFO     | intersect: 12224226980.12171
[2026-01-10 04:29:04] 2026-01-10 03:28:22,284 | INFO     | chi2: 19.076320739015056
[2026-01-10 04:29:04] 2026-01-10 03:28:22,293 | INFO     | sum of square deviations: 52726619926.54863
[2026-01-10 04:29:04] 2026-01-10 03:28:22,317 | INFO     | sum of deviations: -187060412994.2273
[2026-01-10 04:29:04] 2026-01-10 03:28:22,317 | INFO     | mean x: 1767998378.2382672
[2026-01-10 04:29:04] 2026-01-10 03:28:22,317 | INFO     | mean y: 2732341.8880866426
[2026-01-10 04:29:04] 2026-01-10 03:28:22,318 | INFO     | intersect: 6275133403.573641
[2026-01-10 04:29:04] 2026-01-10 03:28:22,318 | INFO     | chi2: 15.119509563932967
[2026-01-10 04:29:04] 2026-01-10 03:28:22,319 | INFO     | current chi2=15.119509563932967 (change=20.74200381308113 %)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,319 | INFO     | right removable region: 553
[2026-01-10 04:29:04] 2026-01-10 03:28:22,320 | INFO     | sum of square deviations: 52726370436.548645
[2026-01-10 04:29:04] 2026-01-10 03:28:22,329 | INFO     | sum of deviations: -512574937278.14087
[2026-01-10 04:29:04] 2026-01-10 03:28:22,329 | INFO     | mean x: 1767998683.2382672
[2026-01-10 04:29:04] 2026-01-10 03:28:22,329 | INFO     | mean y: 2727091.9783393503
[2026-01-10 04:29:04] 2026-01-10 03:28:22,329 | INFO     | intersect: 17190176306.9638
[2026-01-10 04:29:04] 2026-01-10 03:28:22,330 | INFO     | chi2: 17.034547067700757
[2026-01-10 04:29:04] 2026-01-10 03:28:22,330 | INFO     | current chi2=17.034547067700757 (change=10.703183801782313 %)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,331 | INFO     | left removable region: 10
[2026-01-10 04:29:04] 2026-01-10 03:28:22,331 | INFO     | sum of square deviations: 49647783055.4364
[2026-01-10 04:29:04] 2026-01-10 03:28:22,340 | INFO     | sum of deviations: -305829444759.9779
[2026-01-10 04:29:04] 2026-01-10 03:28:22,341 | INFO     | mean x: 1767998652.7513812
[2026-01-10 04:29:04] 2026-01-10 03:28:22,341 | INFO     | mean y: 2754404.97053407
[2026-01-10 04:29:04] 2026-01-10 03:28:22,341 | INFO     | intersect: 10893594096.716585
[2026-01-10 04:29:04] 2026-01-10 03:28:22,342 | INFO     | chi2: 12.00921446959817
[2026-01-10 04:29:04] 2026-01-10 03:28:22,342 | INFO     | current memory leak: -6.16 B/s (using 543 data points, chi2=12.01)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,343 | INFO     | could have reported an average CPU frequency of 1999 MHz (21 samples)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,343 | INFO     | ..............................
[2026-01-10 04:29:04] 2026-01-10 03:28:22,343 | INFO     | . Timing measurements:
[2026-01-10 04:29:04] 2026-01-10 03:28:22,343 | INFO     | . get job = 0 s
[2026-01-10 04:29:04] 2026-01-10 03:28:22,343 | INFO     | . initial setup = 2 s
[2026-01-10 04:29:04] 2026-01-10 03:28:22,344 | INFO     | . payload setup = 8 s
[2026-01-10 04:29:04] 2026-01-10 03:28:22,344 | INFO     | . stage-in = 0 s
[2026-01-10 04:29:04] 2026-01-10 03:28:22,344 | INFO     | . payload execution = 34074 s
[2026-01-10 04:29:04] 2026-01-10 03:28:22,344 | INFO     | . stage-out = 7 s
[2026-01-10 04:29:04] 2026-01-10 03:28:22,344 | INFO     | . log creation = 1 s
[2026-01-10 04:29:04] 2026-01-10 03:28:22,344 | INFO     | ..............................
[2026-01-10 04:29:04] 2026-01-10 03:28:22,471 | INFO     | 
[2026-01-10 04:29:04] 2026-01-10 03:28:22,471 | INFO     | job summary report
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | --------------------------------------------------
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | PanDA job id: 6963195801
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | task id: 47962010
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | errors: (none)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | pilot state: finished 
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | transexitcode: 0
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | exeerrorcode: 0
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | exeerrordiag: 
[2026-01-10 04:29:04] 2026-01-10 03:28:22,472 | INFO     | exitcode: 0
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | exitmsg: OK
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | cpuconsumptiontime: 171059 s
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | nevents: 450
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | neventsw: 0
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | pid: 11302
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | pgrp: 11302
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | corecount: 8
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | event service: False
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | sizes: {0: 2286787, 1: 2286986, 6: 2287280, 12: 2287308, 34086: 2325841, 34087: 2325840, 34096: 2333964, 34208: 2334154}
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | --------------------------------------------------
[2026-01-10 04:29:04] 2026-01-10 03:28:22,473 | INFO     | 
[2026-01-10 04:29:04] 2026-01-10 03:28:22,474 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-10 04:29:04] 2026-01-10 03:28:22,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,884 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,884 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:29:04] 2026-01-10 03:28:22,884 | INFO     | job 6963195801 has completed (purged errors)
[2026-01-10 04:29:04] 2026-01-10 03:28:22,884 | INFO     | overall cleanup function is called
[2026-01-10 04:29:04] 2026-01-10 03:28:23,900 | INFO     | --- collectZombieJob: --- 10, [11302]
[2026-01-10 04:29:04] 2026-01-10 03:28:23,900 | INFO     | zombie collector waiting for pid 11302
[2026-01-10 04:29:04] 2026-01-10 03:28:23,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:29:04] 2026-01-10 03:28:23,901 | INFO     | collected zombie processes
[2026-01-10 04:29:04] 2026-01-10 03:28:23,901 | INFO     | will attempt to kill all subprocesses of pid=11302
[2026-01-10 04:29:04] 2026-01-10 03:28:23,996 | INFO     | process IDs to be killed: [11302] (in reverse order)
[2026-01-10 04:29:04] 2026-01-10 03:28:25,081 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:29:04] 2026-01-10 03:28:25,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:29:04] 2026-01-10 03:28:25,083 | INFO     | did not find any defunct processes belonging to 11302
[2026-01-10 04:29:04] 2026-01-10 03:28:25,085 | INFO     | did not find any defunct processes belonging to 11302
[2026-01-10 04:29:04] 2026-01-10 03:28:25,085 | INFO     | ready for new job
[2026-01-10 04:29:04] 2026-01-10 03:28:25,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:29:04] 2026-01-10 03:28:25,089 | INFO     | ***************************************
[2026-01-10 04:29:04] 2026-01-10 03:28:25,089 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:29:04] 2026-01-10 03:28:25,089 | INFO     | ***************************************
[2026-01-10 04:29:04] 2026-01-10 03:28:25,089 | INFO     | 
[2026-01-10 04:29:04] 2026-01-10 03:28:25,090 | INFO     | pilot is running in a VM
[2026-01-10 04:29:04] 2026-01-10 03:28:25,090 | INFO     | architecture information:
[2026-01-10 04:29:04] 2026-01-10 03:28:25,110 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:29:04] 2026-01-10 03:28:25,406 | INFO     | cat /etc/os-release:
[2026-01-10 04:29:04] NAME="CentOS Linux"
[2026-01-10 04:29:04] VERSION="7 (Core)"
[2026-01-10 04:29:04] ID="centos"
[2026-01-10 04:29:04] ID_LIKE="rhel fedora"
[2026-01-10 04:29:04] VERSION_ID="7"
[2026-01-10 04:29:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:29:04] ANSI_COLOR="0;31"
[2026-01-10 04:29:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:29:04] HOME_URL="https://www.centos.org/"
[2026-01-10 04:29:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:29:04] 
[2026-01-10 04:29:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:29:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:29:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:29:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:29:04] 
[2026-01-10 04:29:04] 2026-01-10 03:28:25,406 | INFO     | ***************************************
[2026-01-10 04:29:04] 2026-01-10 03:28:25,909 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-10 04:29:04] 2026-01-10 03:28:26,202 | INFO     | sufficient remaining disk space (495419654144 B)
[2026-01-10 04:29:04] 2026-01-10 03:28:26,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:29:04] 2026-01-10 03:28:26,202 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:29:04] 2026-01-10 03:28:26,203 | INFO     | update_server=False
[2026-01-10 04:29:04] 2026-01-10 03:28:26,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:29:04] 2026-01-10 03:28:26,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:29:04] 2026-01-10 03:28:26,204 | INFO     | aborting loop
[2026-01-10 04:29:04] 2026-01-10 03:28:26,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:29:04] 2026-01-10 03:28:26,315 | INFO     | all job control threads have been joined
[2026-01-10 04:29:04] 2026-01-10 03:28:27,208 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:27,209 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:27,273 | INFO     | all data control threads have been joined
[2026-01-10 04:29:04] 2026-01-10 03:28:27,316 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:27,320 | INFO     | [job] control thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:27,396 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:27,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:29:04] 2026-01-10 03:28:27,648 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:27,687 | INFO     | all payload control threads have been joined
[2026-01-10 04:29:04] 2026-01-10 03:28:27,752 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:27,863 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:28,279 | INFO     | [data] control thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:28,319 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:28,339 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:28,492 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:28,632 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:28,662 | INFO     | [job] validate thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:28,693 | INFO     | [payload] control thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:29,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:29:04] 2026-01-10 03:28:29,977 [wrapper] supervise_pilot (15 min periods counter: 39)
[2026-01-10 04:29:04] 2026-01-10 03:28:33,465 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:29:04] 2026-01-10 03:28:54,449 | INFO     | PID=4866 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 04:29:04] 2026-01-10 03:28:54,449 | INFO     | .. there are 2 such processes running
[2026-01-10 04:29:04] 2026-01-10 03:28:54,450 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:29:04] 2026-01-10 03:28:54,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:29:04] 2026-01-10 03:28:54,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:29:04] 2026-01-10 03:28:56,469 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:29:04] 2026-01-10 03:28:56,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784067024704)>', '<ExcThread(monitor, started 139783753930496)>']
[2026-01-10 04:29:04] 2026-01-10 03:28:57,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:29:04] 2026-01-10 03:28:57,469 | INFO     | [monitor] control thread has ended
[2026-01-10 04:29:04] 2026-01-10 03:29:01,777 | INFO     | all workflow threads have been joined
[2026-01-10 04:29:04] 2026-01-10 03:29:01,778 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:29:04] 2026-01-10 03:29:01,778 | INFO     | traces error code: 0
[2026-01-10 04:29:04] 2026-01-10 03:29:01,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:29:04] 2026-01-10 03:29:02,146 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:29:04] 2026-01-10 03:29:02,201 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:29:04] 2026-01-10 03:29:02,343 [wrapper] pilotpid: 4866
[2026-01-10 04:29:04] 2026-01-10 03:29:02,456 [wrapper] Pilot exit status: 0
[2026-01-10 04:29:04] 2026-01-10 03:29:02,848 [wrapper] pandaids: 6963195801
[2026-01-10 04:29:04] 2026-01-10 03:29:03,618 [wrapper] cleanup supervisor_pilot 18590 4867
[2026-01-10 04:29:04] 2026-01-10 03:29:03,713 [wrapper] Test setup, not cleaning
[2026-01-10 04:29:04] 2026-01-10 03:29:03,809 [wrapper] apfmon messages muted
[2026-01-10 04:29:04] 2026-01-10 03:29:03,929 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:29:04] 2026-01-10 03:29:04,047 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:29:04]  *** Error codes and diagnostics ***
[2026-01-10 04:29:04]     "exeErrorCode": 0,
[2026-01-10 04:29:04]     "exeErrorDiag": "",
[2026-01-10 04:29:04]     "pilotErrorCode": 0,
[2026-01-10 04:29:04]     "pilotErrorDiag": "",
[2026-01-10 04:29:04]  *** Listing of results directory ***
[2026-01-10 04:29:04] total 1167128
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 04:29:04] -rwx------. 1 boinc boinc     36322 Jan  9 08:13 runpilot2-wrapper.sh
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc       100 Jan  9 18:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:29:04] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 18:57 run_atlas
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc       105 Jan  9 18:57 job.xml
[2026-01-10 04:29:04] -rw-r--r--. 2 boinc boinc 392145699 Jan  9 18:57 EVNT.47962006._000058.pool.root.1
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc      6392 Jan  9 18:57 init_data.xml
[2026-01-10 04:29:04] -rw-r--r--. 2 boinc boinc 394320947 Jan  9 18:57 EVNT.47962006._000059.pool.root.1
[2026-01-10 04:29:04] -rw-r--r--. 2 boinc boinc     15897 Jan  9 18:57 start_atlas.sh
[2026-01-10 04:29:04] drwxrwx--x. 2 boinc boinc        88 Jan  9 18:57 shared
[2026-01-10 04:29:04] -rw-r--r--. 2 boinc boinc    592705 Jan  9 18:57 input.tar.gz
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc         0 Jan  9 18:57 boinc_lockfile
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc      3421 Jan  9 18:57 pandaJob.out
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc    989356 Jan  9 18:57 agis_schedconf.cvmfs.json
[2026-01-10 04:29:04] drwx------. 5 boinc boinc      4096 Jan  9 18:57 pilot3
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc       533 Jan 10 03:55 boinc_task_state.xml
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc 392192809 Jan 10 04:25 HITS.47962010._000632.pool.root.1
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc      1024 Jan 10 04:26 memory_monitor_summary.json
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc   1516240 Jan 10 04:26 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc   1700789 Jan 10 04:26 log.47962010._000632.job.log.tgz.1
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc      8137 Jan 10 04:28 heartbeat.json
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc        29 Jan 10 04:28 wrapper_checkpoint.txt
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc      8192 Jan 10 04:28 boinc_mmap_file
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc        95 Jan 10 04:28 pilot_heartbeat.json
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc      4884 Jan 10 04:29 pilotlog.txt
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc   4588805 Jan 10 04:29 log.47962010._000632.job.log.1
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc       353 Jan 10 04:29 output.list
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc       620 Jan 10 04:29 runtime_log
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc   6307840 Jan 10 04:29 result.tar.gz
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc       660 Jan 10 04:29 yhQLDm4rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9QmKDmXkVNkm.diag
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc      8885 Jan 10 04:29 runtime_log.err
[2026-01-10 04:29:04] -rw-r--r--. 1 boinc boinc     21349 Jan 10 04:29 stderr.txt
[2026-01-10 04:29:04] HITS file was successfully produced:
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc 392192809 Jan 10 04:25 shared/HITS.pool.root.1
[2026-01-10 04:29:04]  *** Contents of shared directory: ***
[2026-01-10 04:29:04] total 1157796
[2026-01-10 04:29:04] -rw-r--r--. 2 boinc boinc 392145699 Jan  9 18:57 ATLAS.root_0
[2026-01-10 04:29:04] -rw-r--r--. 2 boinc boinc 394320947 Jan  9 18:57 ATLAS.root_1
[2026-01-10 04:29:04] -rw-r--r--. 2 boinc boinc     15897 Jan  9 18:57 start_atlas.sh
[2026-01-10 04:29:04] -rw-r--r--. 2 boinc boinc    592705 Jan  9 18:57 input.tar.gz
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc 392192809 Jan 10 04:25 HITS.pool.root.1
[2026-01-10 04:29:04] -rw-------. 1 boinc boinc   6307840 Jan 10 04:29 result.tar.gz
04:29:06 (1136): run_atlas exited; CPU time 171127.884065
04:29:06 (1136): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN