Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:09:26 (25819): wrapper (7.7.26015): starting
10:09:26 (25819): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 10:09:26] Arguments: --nthreads 12
[2026-01-09 10:09:26] Threads: 12
[2026-01-09 10:09:26] Checking for CVMFS
[2026-01-09 10:09:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:09:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:09:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:09:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:09:35] 2.8.1.0 25995 0 30232 154946 3 1 2078678 4096001 0 130560 0 0 100.000 1 0 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 10:09:35] CVMFS is ok
[2026-01-09 10:09:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:09:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:09:35] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 10:09:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 10:09:35] Further information can be found at the LHC@home message board.
[2026-01-09 10:09:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:09:35] Checking for apptainer binary...
[2026-01-09 10:09:35] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 10:09:35] apptainer is not installed, using version from CVMFS
[2026-01-09 10:09:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:09:36] farmville.blisteringsheep.pec
[2026-01-09 10:09:36] apptainer works
[2026-01-09 10:09:36] Set ATHENA_PROC_NUMBER=12
[2026-01-09 10:09:36] Set ATHENA_CORE_NUMBER=12
[2026-01-09 10:09:36] Starting ATLAS job with PandaID=6963186491
[2026-01-09 10:09:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:21:02]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:21:02]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6963186491/log.47898826._036467.job.log.tgz.1
[2026-01-09 11:21:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/2e/log.47898826._036467.job.log.tgz.1
[2026-01-09 11:21:02]  workdir=None
[2026-01-09 11:21:02] ]
[2026-01-09 11:21:02] 2026-01-09 16:19:50,845 | INFO     | transferring file log.47898826._036467.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6963186491/log.47898826._036467.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-09 11:21:02] 2026-01-09 16:19:50,845 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6963186491/log.47898826._036467.job.log.tgz.1 /var/lib/boinc/slots/4/log.47898826._036467.job
[2026-01-09 11:21:02] 2026-01-09 16:19:50,856 | INFO     | adding to output.list: log.47898826._036467.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/2e/log.47898826._036467.job.log.tg
[2026-01-09 11:21:02] 2026-01-09 16:19:50,857 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 11:21:02] 2026-01-09 16:19:50,857 | INFO     | summary of transferred files:
[2026-01-09 11:21:02] 2026-01-09 16:19:50,857 | INFO     |  -- lfn=log.47898826._036467.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 11:21:02] 2026-01-09 16:19:50,857 | INFO     | stage-out finished correctly
[2026-01-09 11:21:02] 2026-01-09 16:19:50,966 | INFO     | time since job start (4200s) is within the limit (349056.0s)
[2026-01-09 11:21:02] 2026-01-09 16:19:52,971 | INFO     | time since job start (4202s) is within the limit (349056.0s)
[2026-01-09 11:21:02] 2026-01-09 16:19:53,597 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 11:21:02] 2026-01-09 16:19:53,709 | WARNING  | process 37691 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 11:21:02] 2026-01-09 16:19:53,709 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963186491/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:21:02] 2026-01-09 16:19:53,863 | INFO     | number of running child processes to parent process 37691: 1
[2026-01-09 11:21:02] 2026-01-09 16:19:53,863 | INFO     | maximum number of monitored processes: 6
[2026-01-09 11:21:02] 2026-01-09 16:19:54,449 | INFO     | job 6963186491 has state=finished
[2026-01-09 11:21:02] 2026-01-09 16:19:54,449 | INFO     | preparing for final server update for job 6963186491 in state='finished'
[2026-01-09 11:21:02] 2026-01-09 16:19:54,450 | INFO     | this job has now completed (state=finished)
[2026-01-09 11:21:02] 2026-01-09 16:19:54,450 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 11:21:02] 2026-01-09 16:19:54,450 | INFO     | log transfer has been attempted: DONE
[2026-01-09 11:21:02] 2026-01-09 16:19:54,450 | INFO     | job 6963186491 has finished - writing final server update
[2026-01-09 11:21:02] 2026-01-09 16:19:54,450 | INFO     | total number of processed events: 400 (read)
[2026-01-09 11:21:02] 2026-01-09 16:19:54,451 | INFO     | executing command: lscpu
[2026-01-09 11:21:02] 2026-01-09 16:19:54,484 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 11:21:02] 2026-01-09 16:19:54,977 | INFO     | time since job start (4204s) is within the limit (349056.0s)
[2026-01-09 11:21:02] 2026-01-09 16:19:56,366 | INFO     | monitor loop #314: job 0:6963186491 is in state 'finished'
[2026-01-09 11:21:02] 2026-01-09 16:19:56,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:21:02] 2026-01-09 16:19:56,983 | INFO     | time since job start (4206s) is within the limit (349056.0s)
[2026-01-09 11:21:02] 2026-01-09 16:19:58,869 | INFO     | monitor loop #315: job 0:6963186491 is in state 'finished'
[2026-01-09 11:21:02] 2026-01-09 16:19:58,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:21:02] 2026-01-09 16:19:58,987 | INFO     | time since job start (4208s) is within the limit (349056.0s)
[2026-01-09 11:21:02] 2026-01-09 16:20:00,990 | INFO     | time since job start (4210s) is within the limit (349056.0s)
[2026-01-09 11:21:02] 2026-01-09 16:20:01,372 | INFO     | monitor loop #316: job 0:6963186491 is in state 'finished'
[2026-01-09 11:21:02] 2026-01-09 16:20:01,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:21:02] 2026-01-09 16:20:01,689 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:21:02] 2026-01-09 16:20:01,695 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2850.0791458333333
[2026-01-09 11:21:02] 2026-01-09 16:20:01,702 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963186491/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:21:02] 2026-01-09 16:20:01,703 | INFO     | extracted standard info from prmon json
[2026-01-09 11:21:02] 2026-01-09 16:20:01,703 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:21:02] 2026-01-09 16:20:01,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:21:02] 2026-01-09 16:20:01,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:21:02] 2026-01-09 16:20:01,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:21:02] 2026-01-09 16:20:01,705 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:21:02] 2026-01-09 16:20:01,705 | INFO     | sum of square deviations: 73882315.5
[2026-01-09 11:21:02] 2026-01-09 16:20:01,705 | INFO     | sum of deviations: -63723162.0
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | mean x: 1767973577.5
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | mean y: 2762078.129032258
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | intersect: 1527631269.4682243
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | chi2: 0.005272165043704729
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | current memory leak: -0.86 B/s (using 62 data points, chi2=0.01)
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | could have reported an average CPU frequency of 2937 MHz (6 samples)
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | ..............................
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | . Timing measurements:
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | . get job = 0 s
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | . initial setup = 3 s
[2026-01-09 11:21:02] 2026-01-09 16:20:01,706 | INFO     | . payload setup = 4 s
[2026-01-09 11:21:02] 2026-01-09 16:20:01,707 | INFO     | . stage-in = 0 s
[2026-01-09 11:21:02] 2026-01-09 16:20:01,707 | INFO     | . payload execution = 4177 s
[2026-01-09 11:21:02] 2026-01-09 16:20:01,707 | INFO     | . stage-out = 0 s
[2026-01-09 11:21:02] 2026-01-09 16:20:01,707 | INFO     | . log creation = 0 s
[2026-01-09 11:21:02] 2026-01-09 16:20:01,707 | INFO     | ..............................
[2026-01-09 11:21:02] 2026-01-09 16:20:01,759 | INFO     | 
[2026-01-09 11:21:02] 2026-01-09 16:20:01,759 | INFO     | job summary report
[2026-01-09 11:21:02] 2026-01-09 16:20:01,759 | INFO     | --------------------------------------------------
[2026-01-09 11:21:02] 2026-01-09 16:20:01,759 | INFO     | PanDA job id: 6963186491
[2026-01-09 11:21:02] 2026-01-09 16:20:01,759 | INFO     | task id: 47898826
[2026-01-09 11:21:02] 2026-01-09 16:20:01,759 | INFO     | errors: (none)
[2026-01-09 11:21:02] 2026-01-09 16:20:01,759 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | pilot state: finished 
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | transexitcode: 0
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | exeerrorcode: 0
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | exeerrordiag: 
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | exitcode: 0
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | exitmsg: OK
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | cpuconsumptiontime: 45686 s
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | nevents: 400
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | neventsw: 0
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | pid: 37691
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | pgrp: 37691
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | corecount: 12
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | event service: False
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | sizes: {0: 2283142, 1: 2283998, 4: 2284260, 12: 2284288, 4185: 2310261, 4187: 2319259, 4190: 2319443, 4198: 2319637}
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | --------------------------------------------------
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | 
[2026-01-09 11:21:02] 2026-01-09 16:20:01,760 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-09 11:21:02] 2026-01-09 16:20:01,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,773 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,773 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,773 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:21:02] 2026-01-09 16:20:01,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,775 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:21:02] 2026-01-09 16:20:01,775 | INFO     | job 6963186491 has completed (purged errors)
[2026-01-09 11:21:02] 2026-01-09 16:20:01,775 | INFO     | overall cleanup function is called
[2026-01-09 11:21:02] 2026-01-09 16:20:02,783 | INFO     | --- collectZombieJob: --- 10, [37691]
[2026-01-09 11:21:02] 2026-01-09 16:20:02,783 | INFO     | zombie collector waiting for pid 37691
[2026-01-09 11:21:02] 2026-01-09 16:20:02,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:21:02] 2026-01-09 16:20:02,783 | INFO     | collected zombie processes
[2026-01-09 11:21:02] 2026-01-09 16:20:02,783 | INFO     | will attempt to kill all subprocesses of pid=37691
[2026-01-09 11:21:02] 2026-01-09 16:20:02,931 | INFO     | process IDs to be killed: [37691] (in reverse order)
[2026-01-09 11:21:02] 2026-01-09 16:20:02,988 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:21:02] 2026-01-09 16:20:02,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:21:02] 2026-01-09 16:20:02,994 | INFO     | did not find any defunct processes belonging to 37691
[2026-01-09 11:21:02] 2026-01-09 16:20:02,998 | INFO     | did not find any defunct processes belonging to 37691
[2026-01-09 11:21:02] 2026-01-09 16:20:02,998 | INFO     | ready for new job
[2026-01-09 11:21:02] 2026-01-09 16:20:02,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:21:02] 2026-01-09 16:20:03,000 | INFO     | ***************************************
[2026-01-09 11:21:02] 2026-01-09 16:20:03,000 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:21:02] 2026-01-09 16:20:03,000 | INFO     | ***************************************
[2026-01-09 11:21:02] 2026-01-09 16:20:03,000 | INFO     | 
[2026-01-09 11:21:02] 2026-01-09 16:20:03,002 | INFO     | architecture information:
[2026-01-09 11:21:02] 2026-01-09 16:20:03,003 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:21:02] 2026-01-09 16:20:03,011 | INFO     | cat /etc/os-release:
[2026-01-09 11:21:02] NAME="CentOS Linux"
[2026-01-09 11:21:02] VERSION="7 (Core)"
[2026-01-09 11:21:02] ID="centos"
[2026-01-09 11:21:02] ID_LIKE="rhel fedora"
[2026-01-09 11:21:02] VERSION_ID="7"
[2026-01-09 11:21:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:21:02] ANSI_COLOR="0;31"
[2026-01-09 11:21:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:21:02] HOME_URL="https://www.centos.org/"
[2026-01-09 11:21:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:21:02] 
[2026-01-09 11:21:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:21:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:21:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:21:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:21:02] 
[2026-01-09 11:21:02] 2026-01-09 16:20:03,012 | INFO     | ***************************************
[2026-01-09 11:21:02] 2026-01-09 16:20:03,515 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-09 11:21:02] 2026-01-09 16:20:03,526 | INFO     | sufficient remaining disk space (386419130368 B)
[2026-01-09 11:21:02] 2026-01-09 16:20:03,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:21:02] 2026-01-09 16:20:03,527 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:21:02] 2026-01-09 16:20:03,527 | INFO     | update_server=False
[2026-01-09 11:21:02] 2026-01-09 16:20:03,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:21:02] 2026-01-09 16:20:03,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:21:02] 2026-01-09 16:20:03,875 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 11:21:02] 2026-01-09 16:20:03,875 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 11:21:02] 2026-01-09 16:20:03,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:21:02] 2026-01-09 16:20:03,875 | INFO     | will abort loop
[2026-01-09 11:21:02] 2026-01-09 16:20:03,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:21:02] 2026-01-09 16:20:04,060 | INFO     | all data control threads have been joined
[2026-01-09 11:21:02] 2026-01-09 16:20:04,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:21:02] 2026-01-09 16:20:04,532 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:04,532 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:04,570 | INFO     | all job control threads have been joined
[2026-01-09 11:21:02] 2026-01-09 16:20:04,651 | INFO     | all payload control threads have been joined
[2026-01-09 11:21:02] 2026-01-09 16:20:04,714 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:04,876 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:04,881 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,048 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,066 | INFO     | [data] control thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,378 | INFO     | [job] validate thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,575 | INFO     | [job] control thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,656 | INFO     | [payload] control thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,784 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,806 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,922 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:05,968 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:08,194 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:21:02] 2026-01-09 16:20:34,314 | INFO     | PID=30554 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:21:02] 2026-01-09 16:20:34,314 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:21:02] 2026-01-09 16:20:34,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:21:02] 2026-01-09 16:20:34,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:21:02] 2026-01-09 16:20:56,256 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:21:02] 2026-01-09 16:20:56,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678021535552)>', '<ExcThread(monitor, started 140677350418176)>']
[2026-01-09 11:21:02] 2026-01-09 16:20:57,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:21:02] 2026-01-09 16:20:57,430 | INFO     | [monitor] control thread has ended
[2026-01-09 11:21:02] 2026-01-09 16:21:01,853 | INFO     | all workflow threads have been joined
[2026-01-09 11:21:02] 2026-01-09 16:21:01,853 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:21:02] 2026-01-09 16:21:01,853 | INFO     | traces error code: 0
[2026-01-09 11:21:02] 2026-01-09 16:21:01,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:21:02] 2026-01-09 16:21:01,937 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:21:02] 2026-01-09 16:21:01,939 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:21:02] 2026-01-09 16:21:01,940 [wrapper] pilotpid: 30554
[2026-01-09 11:21:02] 2026-01-09 16:21:01,942 [wrapper] Pilot exit status: 0
[2026-01-09 11:21:02] 2026-01-09 16:21:01,948 [wrapper] pandaids: 6963186491
[2026-01-09 11:21:02] 2026-01-09 16:21:01,975 [wrapper] cleanup supervisor_pilot  123597 30555
[2026-01-09 11:21:02] 2026-01-09 16:21:01,976 [wrapper] Test setup, not cleaning
[2026-01-09 11:21:02] 2026-01-09 16:21:01,978 [wrapper] apfmon messages muted
[2026-01-09 11:21:02] 2026-01-09 16:21:01,980 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:21:02] 2026-01-09 16:21:01,981 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:21:02]  *** Error codes and diagnostics ***
[2026-01-09 11:21:02]     "exeErrorCode": 0,
[2026-01-09 11:21:02]     "exeErrorDiag": "",
[2026-01-09 11:21:02]     "pilotErrorCode": 0,
[2026-01-09 11:21:02]     "pilotErrorDiag": "",
[2026-01-09 11:21:02]  *** Listing of results directory ***
[2026-01-09 11:21:02] total 436900
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-09 11:21:02] -rwx------ 1 boinc boinc     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:01 queuedata.json
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc       100 Jan  9 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:21:02] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 10:09 run_atlas
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc       105 Jan  9 10:09 job.xml
[2026-01-09 11:21:02] -rw-r--r-- 2 boinc boinc 225825360 Jan  9 10:09 EVNT.47898824._001397.pool.root.1
[2026-01-09 11:21:02] -rw-r--r-- 2 boinc boinc    610547 Jan  9 10:09 input.tar.gz
[2026-01-09 11:21:02] -rw-r--r-- 2 boinc boinc     15847 Jan  9 10:09 start_atlas.sh
[2026-01-09 11:21:02] drwxrwx--x 1 boinc boinc        76 Jan  9 10:09 shared
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc         0 Jan  9 10:09 boinc_setup_complete
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc      9258 Jan  9 10:09 init_data.xml
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc         0 Jan  9 10:09 boinc_lockfile
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc      2519 Jan  9 10:09 pandaJob.out
[2026-01-09 11:21:02] -rw------- 1 boinc boinc    989377 Jan  9 10:09 agis_schedconf.cvmfs.json
[2026-01-09 11:21:02] -rw------- 1 boinc boinc   1516240 Jan  9 10:09 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:21:02] drwx------ 1 boinc boinc       488 Jan  9 10:09 pilot3
[2026-01-09 11:21:02] -rw------- 1 boinc boinc 215616078 Jan  9 11:19 HITS.47898826._036467.pool.root.1
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc       529 Jan  9 11:19 boinc_task_state.xml
[2026-01-09 11:21:02] -rw------- 1 boinc boinc      1033 Jan  9 11:19 memory_monitor_summary.json
[2026-01-09 11:21:02] -rw------- 1 boinc boinc        95 Jan  9 11:19 pilot_heartbeat.json
[2026-01-09 11:21:02] -rw------- 1 boinc boinc    388357 Jan  9 11:19 log.47898826._036467.job.log.tgz.1
[2026-01-09 11:21:02] -rw------- 1 boinc boinc      7823 Jan  9 11:20 heartbeat.json
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc      8192 Jan  9 11:20 boinc_mmap_file
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc        27 Jan  9 11:20 wrapper_checkpoint.txt
[2026-01-09 11:21:02] -rw------- 1 boinc boinc      4933 Jan  9 11:21 pilotlog.txt
[2026-01-09 11:21:02] -rw------- 1 boinc boinc    615081 Jan  9 11:21 log.47898826._036467.job.log.1
[2026-01-09 11:21:02] -rw------- 1 boinc boinc       357 Jan  9 11:21 output.list
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc       620 Jan  9 11:21 runtime_log
[2026-01-09 11:21:02] -rw------- 1 boinc boinc   1024000 Jan  9 11:21 result.tar.gz
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc      8904 Jan  9 11:21 runtime_log.err
[2026-01-09 11:21:02] -rw------- 1 boinc boinc       673 Jan  9 11:21 bBqMDmN0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4tlKDmefNEwn.diag
[2026-01-09 11:21:02] -rw-r--r-- 1 boinc boinc     22642 Jan  9 11:21 stderr.txt
[2026-01-09 11:21:02] HITS file was successfully produced:
[2026-01-09 11:21:02] -rw------- 1 boinc boinc 215616078 Jan  9 11:19 shared/HITS.pool.root.1
[2026-01-09 11:21:02]  *** Contents of shared directory: ***
[2026-01-09 11:21:02] total 432716
[2026-01-09 11:21:02] -rw-r--r-- 2 boinc boinc 225825360 Jan  9 10:09 ATLAS.root_0
[2026-01-09 11:21:02] -rw-r--r-- 2 boinc boinc    610547 Jan  9 10:09 input.tar.gz
[2026-01-09 11:21:02] -rw-r--r-- 2 boinc boinc     15847 Jan  9 10:09 start_atlas.sh
[2026-01-09 11:21:02] -rw------- 1 boinc boinc 215616078 Jan  9 11:19 HITS.pool.root.1
[2026-01-09 11:21:02] -rw------- 1 boinc boinc   1024000 Jan  9 11:21 result.tar.gz
11:21:03 (25819): run_atlas exited; CPU time 45797.431094
11:21:03 (25819): called boinc_finish(0)

</stderr_txt>
]]>

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