Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:24:23 (657810): wrapper (7.7.26015): starting
10:24:23 (657810): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:24:23] Arguments: --nthreads 8
[2026-01-09 10:24:23] Threads: 8
[2026-01-09 10:24:23] Checking for CVMFS
[2026-01-09 10:24:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:24:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:24:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:24:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:24:25] 2.13.3.0 12500 93587 211028 154948 1 375 30587731 32503809 15861 16776704 0 500473577 99.476 670629455 35382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 10:24:25] CVMFS is ok
[2026-01-09 10:24:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:24:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:24:25] Further information can be found at the LHC@home message board.
[2026-01-09 10:24:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:24:25] Checking for apptainer binary...
[2026-01-09 10:24:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:24:25] Running /usr/bin/apptainer --version
[2026-01-09 10:24:25] apptainer version 1.4.5-2.el9
[2026-01-09 10:24:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:24:26] c7-7-36.aglt2.org
[2026-01-09 10:24:26] apptainer works
[2026-01-09 10:24:26] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:24:26] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:24:26] Starting ATLAS job with PandaID=6963195772
[2026-01-09 10:24:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:19:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:19:19] 2026-01-10 09:18:11,866 | INFO     | extracted standard info from prmon json
[2026-01-10 04:19:19] 2026-01-10 09:18:11,866 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:19:19] 2026-01-10 09:18:11,866 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:19:19] 2026-01-10 09:18:11,879 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:19:19] 2026-01-10 09:18:11,880 | INFO     | sum of square deviations: 363091567981.6927
[2026-01-10 04:19:19] 2026-01-10 09:18:11,900 | INFO     | sum of deviations: 1778584494808.8901
[2026-01-10 04:19:19] 2026-01-10 09:18:11,900 | INFO     | mean x: 1768004538.9829223
[2026-01-10 04:19:19] 2026-01-10 09:18:11,900 | INFO     | mean y: 2777232.327324478
[2026-01-10 04:19:19] 2026-01-10 09:18:11,900 | INFO     | intersect: -8657697802.293463
[2026-01-10 04:19:19] 2026-01-10 09:18:11,901 | INFO     | chi2: 10.239614067892592
[2026-01-10 04:19:19] 2026-01-10 09:18:11,902 | INFO     | sum of square deviations: 357949371518.14484
[2026-01-10 04:19:19] 2026-01-10 09:18:11,921 | INFO     | sum of deviations: 2104078028524.7732
[2026-01-10 04:19:19] 2026-01-10 09:18:11,921 | INFO     | mean x: 1768004386.4899905
[2026-01-10 04:19:19] 2026-01-10 09:18:11,921 | INFO     | mean y: 2786880.2163965683
[2026-01-10 04:19:19] 2026-01-10 09:18:11,921 | INFO     | intersect: -10389797881.62174
[2026-01-10 04:19:19] 2026-01-10 09:18:11,922 | INFO     | chi2: 7.338036480618711
[2026-01-10 04:19:19] 2026-01-10 09:18:11,922 | INFO     | current chi2=7.338036480618711 (change=28.336786601870955 %)
[2026-01-10 04:19:19] 2026-01-10 09:18:11,923 | INFO     | sum of square deviations: 352855647217.93774
[2026-01-10 04:19:19] 2026-01-10 09:18:11,943 | INFO     | sum of deviations: 2166090242591.1292
[2026-01-10 04:19:19] 2026-01-10 09:18:11,943 | INFO     | mean x: 1768004233.9923372
[2026-01-10 04:19:19] 2026-01-10 09:18:11,943 | INFO     | mean y: 2788731.7662835247
[2026-01-10 04:19:19] 2026-01-10 09:18:11,943 | INFO     | intersect: -10850535425.875032
[2026-01-10 04:19:19] 2026-01-10 09:18:11,944 | INFO     | chi2: 7.082908082343101
[2026-01-10 04:19:19] 2026-01-10 09:18:11,944 | INFO     | current chi2=7.082908082343101 (change=3.476793811933987 %)
[2026-01-10 04:19:19] 2026-01-10 09:18:11,944 | INFO     | right removable region: 1043
[2026-01-10 04:19:19] 2026-01-10 09:18:11,945 | INFO     | sum of square deviations: 357948418088.1449
[2026-01-10 04:19:19] 2026-01-10 09:18:11,965 | INFO     | sum of deviations: 1369063805448.6536
[2026-01-10 04:19:19] 2026-01-10 09:18:11,965 | INFO     | mean x: 1768004691.4899905
[2026-01-10 04:19:19] 2026-01-10 09:18:11,965 | INFO     | mean y: 2789373.490943756
[2026-01-10 04:19:19] 2026-01-10 09:18:11,965 | INFO     | intersect: -6759389501.081726
[2026-01-10 04:19:19] 2026-01-10 09:18:11,966 | INFO     | chi2: 5.94900420593318
[2026-01-10 04:19:19] 2026-01-10 09:18:11,966 | INFO     | current chi2=5.94900420593318 (change=41.90206616685954 %)
[2026-01-10 04:19:19] 2026-01-10 09:18:11,967 | INFO     | sum of square deviations: 352854059806.99164
[2026-01-10 04:19:19] 2026-01-10 09:18:11,987 | INFO     | sum of deviations: 1048793311484.208
[2026-01-10 04:19:19] 2026-01-10 09:18:11,987 | INFO     | mean x: 1768004843.9971263
[2026-01-10 04:19:19] 2026-01-10 09:18:11,987 | INFO     | mean y: 2798957.735632184
[2026-01-10 04:19:19] 2026-01-10 09:18:11,987 | INFO     | intersect: -5252267842.601421
[2026-01-10 04:19:19] 2026-01-10 09:18:11,988 | INFO     | chi2: 3.3654446249196797
[2026-01-10 04:19:19] 2026-01-10 09:18:11,988 | INFO     | current chi2=3.3654446249196797 (change=43.42843762720513 %)
[2026-01-10 04:19:19] 2026-01-10 09:18:11,989 | INFO     | sum of square deviations: 347808642689.7476
[2026-01-10 04:19:19] 2026-01-10 09:18:12,009 | INFO     | sum of deviations: 996871445823.8293
[2026-01-10 04:19:19] 2026-01-10 09:18:12,010 | INFO     | mean x: 1768004996.4985564
[2026-01-10 04:19:19] 2026-01-10 09:18:12,010 | INFO     | mean y: 2800526.552454283
[2026-01-10 04:19:19] 2026-01-10 09:18:12,010 | INFO     | intersect: -5064565492.455397
[2026-01-10 04:19:19] 2026-01-10 09:18:12,011 | INFO     | chi2: 3.3316336341466948
[2026-01-10 04:19:19] 2026-01-10 09:18:12,011 | INFO     | current chi2=3.3316336341466948 (change=1.0046515257636077 %)
[2026-01-10 04:19:19] 2026-01-10 09:18:12,011 | INFO     | left removable region: 30
[2026-01-10 04:19:19] 2026-01-10 09:18:12,012 | INFO     | sum of square deviations: 322347617929.22003
[2026-01-10 04:19:19] 2026-01-10 09:18:12,030 | INFO     | sum of deviations: 1327206916172.4336
[2026-01-10 04:19:19] 2026-01-10 09:18:12,030 | INFO     | mean x: 1768005118.5054295
[2026-01-10 04:19:19] 2026-01-10 09:18:12,031 | INFO     | mean y: 2813993.1026653503
[2026-01-10 04:19:19] 2026-01-10 09:18:12,031 | INFO     | intersect: -7276621282.959798
[2026-01-10 04:19:19] 2026-01-10 09:18:12,031 | INFO     | chi2: 0.08611193682708752
[2026-01-10 04:19:19] 2026-01-10 09:18:12,032 | INFO     | current memory leak: 4.12 B/s (using 1013 data points, chi2=0.09)
[2026-01-10 04:19:19] 2026-01-10 09:18:12,032 | INFO     | could have reported an average CPU frequency of 3162 MHz (39 samples)
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | ..............................
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | . Timing measurements:
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | . get job = 0 s
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | . initial setup = 4 s
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | . payload setup = 34 s
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | . stage-in = 0 s
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | . payload execution = 64258 s
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | . stage-out = 4 s
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | . log creation = 0 s
[2026-01-10 04:19:19] 2026-01-10 09:18:12,033 | INFO     | ..............................
[2026-01-10 04:19:19] 2026-01-10 09:18:12,101 | INFO     | 
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | job summary report
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | --------------------------------------------------
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | PanDA job id: 6963195772
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | task id: 47962010
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | errors: (none)
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | pilot state: finished 
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | transexitcode: 0
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | exeerrorcode: 0
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | exeerrordiag: 
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | exitcode: 0
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | exitmsg: OK
[2026-01-10 04:19:19] 2026-01-10 09:18:12,102 | INFO     | cpuconsumptiontime: 105955 s
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | nevents: 450
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | neventsw: 0
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | pid: 671259
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | pgrp: 671259
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | corecount: 8
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | event service: False
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | sizes: {0: 2283792, 1: 2284393, 2: 2284505, 3: 2284704, 4: 2284704, 14: 2284732, 25: 2285178, 36: 2285178, 64297: 2340091, 64298: 2340090, 64302: 2349168, 64306: 2
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | --------------------------------------------------
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | 
[2026-01-10 04:19:19] 2026-01-10 09:18:12,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | job 6963195772 has completed (purged errors)
[2026-01-10 04:19:19] 2026-01-10 09:18:12,207 | INFO     | overall cleanup function is called
[2026-01-10 04:19:19] 2026-01-10 09:18:13,251 | INFO     | --- collectZombieJob: --- 10, [671259]
[2026-01-10 04:19:19] 2026-01-10 09:18:13,252 | INFO     | zombie collector waiting for pid 671259
[2026-01-10 04:19:19] 2026-01-10 09:18:13,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:19:19] 2026-01-10 09:18:13,252 | INFO     | collected zombie processes
[2026-01-10 04:19:19] 2026-01-10 09:18:13,252 | INFO     | will attempt to kill all subprocesses of pid=671259
[2026-01-10 04:19:19] 2026-01-10 09:18:13,982 | INFO     | process IDs to be killed: [671259] (in reverse order)
[2026-01-10 04:19:19] 2026-01-10 09:18:14,141 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:19:19] 2026-01-10 09:18:14,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:19:19] 2026-01-10 09:18:14,161 | INFO     | did not find any defunct processes belonging to 671259
[2026-01-10 04:19:19] 2026-01-10 09:18:14,181 | INFO     | did not find any defunct processes belonging to 671259
[2026-01-10 04:19:19] 2026-01-10 09:18:14,181 | INFO     | ready for new job
[2026-01-10 04:19:19] 2026-01-10 09:18:14,181 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:19:19] 2026-01-10 09:18:14,187 | INFO     | ***************************************
[2026-01-10 04:19:19] 2026-01-10 09:18:14,187 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:19:19] 2026-01-10 09:18:14,187 | INFO     | ***************************************
[2026-01-10 04:19:19] 2026-01-10 09:18:14,187 | INFO     | 
[2026-01-10 04:19:19] 2026-01-10 09:18:14,192 | INFO     | architecture information:
[2026-01-10 04:19:19] 2026-01-10 09:18:14,193 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:19:19] 2026-01-10 09:18:14,211 | INFO     | cat /etc/os-release:
[2026-01-10 04:19:19] NAME="CentOS Linux"
[2026-01-10 04:19:19] VERSION="7 (Core)"
[2026-01-10 04:19:19] ID="centos"
[2026-01-10 04:19:19] ID_LIKE="rhel fedora"
[2026-01-10 04:19:19] VERSION_ID="7"
[2026-01-10 04:19:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:19:19] ANSI_COLOR="0;31"
[2026-01-10 04:19:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:19:19] HOME_URL="https://www.centos.org/"
[2026-01-10 04:19:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:19:19] 
[2026-01-10 04:19:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:19:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:19:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:19:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:19:19] 
[2026-01-10 04:19:19] 2026-01-10 09:18:14,212 | INFO     | ***************************************
[2026-01-10 04:19:19] 2026-01-10 09:18:14,716 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 04:19:19] 2026-01-10 09:18:14,828 | INFO     | sufficient remaining disk space (92836724736 B)
[2026-01-10 04:19:19] 2026-01-10 09:18:14,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:19:19] 2026-01-10 09:18:14,829 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:19:19] 2026-01-10 09:18:14,829 | INFO     | update_server=False
[2026-01-10 04:19:19] 2026-01-10 09:18:14,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:19:19] 2026-01-10 09:18:14,895 | INFO     | all job control threads have been joined
[2026-01-10 04:19:19] 2026-01-10 09:18:15,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:19:19] 2026-01-10 09:18:15,082 | INFO     | aborting loop
[2026-01-10 04:19:19] 2026-01-10 09:18:15,253 | INFO     | all payload control threads have been joined
[2026-01-10 04:19:19] 2026-01-10 09:18:15,354 | INFO     | all data control threads have been joined
[2026-01-10 04:19:19] 2026-01-10 09:18:15,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:19:19] 2026-01-10 09:18:15,834 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:15,850 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:15,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:19:19] 2026-01-10 09:18:15,901 | INFO     | [job] control thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:16,088 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:16,129 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:16,226 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:16,251 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:16,259 | INFO     | [payload] control thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:16,370 | INFO     | [data] control thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:17,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:19:19] 2026-01-10 09:18:17,123 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:17,127 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:17,128 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:17,218 | INFO     | [job] validate thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:17,449 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:18,121 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:19,894 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:19:19] 2026-01-10 09:18:44,274 | INFO     | PID=663242 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 04:19:19] 2026-01-10 09:18:44,274 | INFO     | .. there are 16 such processes running
[2026-01-10 04:19:19] 2026-01-10 09:18:44,277 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:19:19] 2026-01-10 09:18:44,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:19:19] 2026-01-10 09:18:44,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:19:19] 2026-01-10 09:19:11,834 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:19:19] 2026-01-10 09:19:13,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488163497792)>', '<ExcThread(monitor, started 140487658804992)>']
[2026-01-10 04:19:19] 2026-01-10 09:19:14,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:19:19] 2026-01-10 09:19:14,475 | INFO     | [monitor] control thread has ended
[2026-01-10 04:19:19] 2026-01-10 09:19:18,494 | INFO     | all workflow threads have been joined
[2026-01-10 04:19:19] 2026-01-10 09:19:18,495 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:19:19] 2026-01-10 09:19:18,495 | INFO     | traces error code: 0
[2026-01-10 04:19:19] 2026-01-10 09:19:18,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:19:19] 2026-01-10 09:19:18,789 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:19:19] 2026-01-10 09:19:18,796 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:19:19] 2026-01-10 09:19:18,802 [wrapper] pilotpid: 663242
[2026-01-10 04:19:19] 2026-01-10 09:19:18,810 [wrapper] Pilot exit status: 0
[2026-01-10 04:19:19] 2026-01-10 09:19:18,855 [wrapper] pandaids: 6963195772
[2026-01-10 04:19:19] 2026-01-10 09:19:18,970 [wrapper] cleanup supervisor_pilot 3226663 663243
[2026-01-10 04:19:19] 2026-01-10 09:19:18,974 [wrapper] Test setup, not cleaning
[2026-01-10 04:19:19] 2026-01-10 09:19:18,978 [wrapper] apfmon messages muted
[2026-01-10 04:19:19] 2026-01-10 09:19:18,981 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:19:19] 2026-01-10 09:19:18,983 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:19:19]  *** Error codes and diagnostics ***
[2026-01-10 04:19:19]     "exeErrorCode": 0,
[2026-01-10 04:19:19]     "exeErrorDiag": "",
[2026-01-10 04:19:19]     "pilotErrorCode": 0,
[2026-01-10 04:19:19]     "pilotErrorDiag": "",
[2026-01-10 04:19:19]  *** Listing of results directory ***
[2026-01-10 04:19:19] total 797772
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 04:19:19] -rwx------. 1 boincer umatlas     36322 Jan  9 02:13 runpilot2-wrapper.sh
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:19:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:24 run_atlas
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:24 job.xml
[2026-01-10 04:19:19] -rw-r--r--. 2 boincer umatlas 392494414 Jan  9 10:24 EVNT.47962006._000057.pool.root.1
[2026-01-10 04:19:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:24 start_atlas.sh
[2026-01-10 04:19:19] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:24 shared
[2026-01-10 04:19:19] -rw-r--r--. 2 boincer umatlas    592608 Jan  9 10:24 input.tar.gz
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:24 boinc_lockfile
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 10:24 pandaJob.out
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas        57 Jan  9 10:24 setup.sh.local
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas    989377 Jan  9 10:25 agis_schedconf.cvmfs.json
[2026-01-10 04:19:19] drwx------. 5 boincer umatlas      4096 Jan  9 10:25 pilot3
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas       533 Jan 10 04:08 boinc_task_state.xml
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas 400050953 Jan 10 04:16 HITS.47962010._000603.pool.root.1
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas      1041 Jan 10 04:17 memory_monitor_summary.json
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:17 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas   2026415 Jan 10 04:17 log.47962010._000603.job.log.tgz.1
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas      6946 Jan 10 04:18 init_data.xml
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas      8557 Jan 10 04:18 heartbeat.json
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas        95 Jan 10 04:18 pilot_heartbeat.json
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas        29 Jan 10 04:19 wrapper_checkpoint.txt
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 04:19 boinc_mmap_file
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas      4823 Jan 10 04:19 pilotlog.txt
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas   8199417 Jan 10 04:19 log.47962010._000603.job.log.1
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas       353 Jan 10 04:19 output.list
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:19 runtime_log
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas  10250240 Jan 10 04:19 result.tar.gz
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas       659 Jan 10 04:19 yNnKDm4rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxQmKDml10eFo.diag
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 04:19 runtime_log.err
[2026-01-10 04:19:19] -rw-r--r--. 1 boincer umatlas     21042 Jan 10 04:19 stderr.txt
[2026-01-10 04:19:19] HITS file was successfully produced:
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas 400050953 Jan 10 04:16 shared/HITS.pool.root.1
[2026-01-10 04:19:19]  *** Contents of shared directory: ***
[2026-01-10 04:19:19] total 784584
[2026-01-10 04:19:19] -rw-r--r--. 2 boincer umatlas 392494414 Jan  9 10:24 ATLAS.root_0
[2026-01-10 04:19:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:24 start_atlas.sh
[2026-01-10 04:19:19] -rw-r--r--. 2 boincer umatlas    592608 Jan  9 10:24 input.tar.gz
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas 400050953 Jan 10 04:16 HITS.pool.root.1
[2026-01-10 04:19:19] -rw-------. 1 boincer umatlas  10250240 Jan 10 04:19 result.tar.gz
04:19:21 (657810): run_atlas exited; CPU time 106906.579957
04:19:21 (657810): called boinc_finish(0)

</stderr_txt>
]]>

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