Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:58:56 (374328): wrapper (7.7.26015): starting
06:58:56 (374328): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 06:58:56] Arguments: --nthreads 12
[2026-01-09 06:58:56] Threads: 12
[2026-01-09 06:58:56] Checking for CVMFS
[2026-01-09 06:58:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:58:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:58:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:58:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:58:57] 2.11.5.0 1829866 91587 156356 154946 0 362 44914059 45568000 13624 130560 0 698804165 99.776 464474538 23822 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-09 06:58:57] CVMFS is ok
[2026-01-09 06:58:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:58:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:58:57] Further information can be found at the LHC@home message board.
[2026-01-09 06:58:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:58:57] Checking for apptainer binary...
[2026-01-09 06:58:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:58:57] Running /usr/bin/apptainer --version
[2026-01-09 06:58:57] apptainer version 1.4.1-1.el9
[2026-01-09 06:58:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:58:57] wns0093.triumf.lcg
[2026-01-09 06:58:57] apptainer works
[2026-01-09 06:58:57] Set ATHENA_PROC_NUMBER=12
[2026-01-09 06:58:57] Set ATHENA_CORE_NUMBER=12
[2026-01-09 06:58:57] Starting ATLAS job with PandaID=6963170045
[2026-01-09 06:58:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:04:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | wrong length of table data, x=[1767970771.0, 1767970832.0], y=[1800.0, 373785.0] (must be same and length>=4)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | could have reported an average CPU frequency of 2749 MHz (4 samples)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | ..............................
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | . Timing measurements:
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | . get job = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . initial setup = 2 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . payload setup = 6 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . stage-in = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . payload execution = 107 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . stage-out = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . log creation = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | ..............................
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963170045/pilotlog.txt
[2026-01-09 07:04:12] 2026-01-09 15:03:19,596 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 07:04:12] - Log from pilotlog.txt -
[2026-01-09 07:04:12] 2026-01-09 15:03:19,582 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963170045/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,583 | INFO     | extracted standard info from prmon json
[2026-01-09 07:04:12] 2026-01-09 15:03:19,583 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:04:12] 2026-01-09 15:03:19,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | wrong length of table data, x=[1767970771.0, 1767970832.0], y=[1800.0, 373785.0] (must be same and length>=4)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | could have reported an average CPU frequency of 2749 MHz (4 samples)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | ..............................
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | . Timing measurements:
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | . get job = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . initial setup = 2 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . payload setup = 6 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . stage-in = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . payload execution = 107 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . stage-out = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . log creation = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | ..............................
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963170045/pilotlog.txt
[2026-01-09 07:04:12] 2026-01-09 15:03:19,596 | WARNING  | 
[2026-01-09 07:04:12] [begin log extracts]
[2026-01-09 07:04:12] - Log from pilotlog.txt -
[2026-01-09 07:04:12] 2026-01-09 15:03:19,582 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963170045/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,583 | INFO     | extracted standard info from prmon json
[2026-01-09 07:04:12] 2026-01-09 15:03:19,583 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:04:12] 2026-01-09 15:03:19,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:04:12] 2026-01-09 15:03:19,584 | WARNING  | wrong length of table data, x=[1767970771.0, 1767970832.0], y=[1800.0, 373785.0] (must be same and length>=4)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | could have reported an average CPU frequency of 2749 MHz (4 samples)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | ..............................
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | . Timing measurements:
[2026-01-09 07:04:12] 2026-01-09 15:03:19,585 | INFO     | . get job = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . initial setup = 2 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . payload setup = 6 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . stage-in = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . payload execution = 107 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . stage-out = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | . log creation = 0 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | ..............................
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 07:04:12] 2026-01-09 15:03:19,586 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963170045/pilotlog.txt
[2026-01-09 07:04:12] [end log extracts]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,597 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,597 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | 
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | job summary report
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | --------------------------------------------------
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | PanDA job id: 6963170045
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | task id: 47962010
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 07:01:10,074 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | pilot state: failed 
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | transexitcode: 65
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | exeerrorcode: 65
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | exitcode: 65
[2026-01-09 07:04:12] 2026-01-09 15:03:19,656 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | cpuconsumptiontime: 41 s
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | nevents: 0
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | neventsw: 0
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | pid: 384544
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | pgrp: 384544
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | corecount: 12
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | event service: False
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | sizes: {0: 2284615, 3: 2284877, 11: 2284905, 117: 2314600, 118: 2314600, 240: 2314794}
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | --------------------------------------------------
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | 
[2026-01-09 07:04:12] 2026-01-09 15:03:19,657 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 07:04:12] 2026-01-09 15:03:19,671 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,673 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:04:12] 2026-01-09 15:03:19,673 | INFO     | job 6963170045 has completed (purged errors)
[2026-01-09 07:04:12] 2026-01-09 15:03:19,673 | INFO     | overall cleanup function is called
[2026-01-09 07:04:12] 2026-01-09 15:03:20,680 | INFO     | --- collectZombieJob: --- 10, [384544]
[2026-01-09 07:04:12] 2026-01-09 15:03:20,681 | INFO     | zombie collector waiting for pid 384544
[2026-01-09 07:04:12] 2026-01-09 15:03:20,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:04:12] 2026-01-09 15:03:20,681 | INFO     | collected zombie processes
[2026-01-09 07:04:12] 2026-01-09 15:03:20,681 | INFO     | will attempt to kill all subprocesses of pid=384544
[2026-01-09 07:04:12] 2026-01-09 15:03:20,854 | INFO     | process IDs to be killed: [384544] (in reverse order)
[2026-01-09 07:04:12] 2026-01-09 15:03:20,919 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:04:12] 2026-01-09 15:03:20,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:04:12] 2026-01-09 15:03:20,927 | INFO     | did not find any defunct processes belonging to 384544
[2026-01-09 07:04:12] 2026-01-09 15:03:20,934 | INFO     | did not find any defunct processes belonging to 384544
[2026-01-09 07:04:12] 2026-01-09 15:03:20,935 | INFO     | ready for new job
[2026-01-09 07:04:12] 2026-01-09 15:03:20,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:04:12] 2026-01-09 15:03:20,936 | INFO     | ***************************************
[2026-01-09 07:04:12] 2026-01-09 15:03:20,936 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:04:12] 2026-01-09 15:03:20,936 | INFO     | ***************************************
[2026-01-09 07:04:12] 2026-01-09 15:03:20,936 | INFO     | 
[2026-01-09 07:04:12] 2026-01-09 15:03:20,938 | INFO     | architecture information:
[2026-01-09 07:04:12] 2026-01-09 15:03:20,939 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:04:12] 2026-01-09 15:03:20,949 | INFO     | cat /etc/os-release:
[2026-01-09 07:04:12] NAME="CentOS Linux"
[2026-01-09 07:04:12] VERSION="7 (Core)"
[2026-01-09 07:04:12] ID="centos"
[2026-01-09 07:04:12] ID_LIKE="rhel fedora"
[2026-01-09 07:04:12] VERSION_ID="7"
[2026-01-09 07:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:04:12] ANSI_COLOR="0;31"
[2026-01-09 07:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:04:12] HOME_URL="https://www.centos.org/"
[2026-01-09 07:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:04:12] 
[2026-01-09 07:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:04:12] 
[2026-01-09 07:04:12] 2026-01-09 15:03:20,949 | INFO     | ***************************************
[2026-01-09 07:04:12] 2026-01-09 15:03:21,452 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 07:04:12] 2026-01-09 15:03:21,464 | INFO     | sufficient remaining disk space (1882283048960 B)
[2026-01-09 07:04:12] 2026-01-09 15:03:21,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:04:12] 2026-01-09 15:03:21,464 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:04:12] 2026-01-09 15:03:21,464 | INFO     | update_server=False
[2026-01-09 07:04:12] 2026-01-09 15:03:21,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:04:12] 2026-01-09 15:03:21,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:04:12] 2026-01-09 15:03:21,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:04:12] 2026-01-09 15:03:21,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:04:12] 2026-01-09 15:03:21,466 | INFO     | aborting loop
[2026-01-09 07:04:12] 2026-01-09 15:03:21,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:04:12] 2026-01-09 15:03:22,464 | INFO     | all data control threads have been joined
[2026-01-09 07:04:12] 2026-01-09 15:03:22,469 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:22,470 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:22,470 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:22,490 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:22,570 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:22,807 | INFO     | all payload control threads have been joined
[2026-01-09 07:04:12] 2026-01-09 15:03:22,869 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:22,870 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:23,119 | INFO     | all job control threads have been joined
[2026-01-09 07:04:12] 2026-01-09 15:03:23,266 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:23,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:23,470 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:23,475 | INFO     | [data] control thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:23,718 | INFO     | [job] validate thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:23,812 | INFO     | [payload] control thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:23,852 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:24,125 | INFO     | [job] control thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:25,471 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:04:12] 2026-01-09 15:03:52,492 | INFO     | PID=377966 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 07:04:12] 2026-01-09 15:03:52,492 | INFO     | .. there are 27 such processes running
[2026-01-09 07:04:12] 2026-01-09 15:03:52,493 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:04:12] 2026-01-09 15:03:52,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:04:12] 2026-01-09 15:03:52,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:04:12] 2026-01-09 15:04:05,401 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:04:12] 2026-01-09 15:04:06,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656629659456)>', '<ExcThread(monitor, started 139655919937280)>']
[2026-01-09 07:04:12] 2026-01-09 15:04:07,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:04:12] 2026-01-09 15:04:07,563 | INFO     | [monitor] control thread has ended
[2026-01-09 07:04:12] 2026-01-09 15:04:11,942 | INFO     | all workflow threads have been joined
[2026-01-09 07:04:12] 2026-01-09 15:04:11,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:04:12] 2026-01-09 15:04:11,943 | INFO     | traces error code: 0
[2026-01-09 07:04:12] 2026-01-09 15:04:11,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:04:12] 2026-01-09 15:04:12,058 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:04:12] 2026-01-09 15:04:12,061 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:04:12] 2026-01-09 15:04:12,063 [wrapper] pilotpid: 377966
[2026-01-09 07:04:12] 2026-01-09 15:04:12,065 [wrapper] Pilot exit status: 0
[2026-01-09 07:04:12] 2026-01-09 15:04:12,075 [wrapper] pandaids: 6963170045
[2026-01-09 07:04:12] 2026-01-09 15:04:12,120 [wrapper] cleanup supervisor_pilot  377972 377967
[2026-01-09 07:04:12] 2026-01-09 15:04:12,122 [wrapper] Test setup, not cleaning
[2026-01-09 07:04:12] 2026-01-09 15:04:12,124 [wrapper] apfmon messages muted
[2026-01-09 07:04:12] 2026-01-09 15:04:12,126 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:04:12] 2026-01-09 15:04:12,128 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:04:12]  *** Error codes and diagnostics ***
[2026-01-09 07:04:12]     "exeErrorCode": 65,
[2026-01-09 07:04:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-09 07:04:12]     "pilotErrorCode": 1305,
[2026-01-09 07:04:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-09 07:04:12]  *** Listing of results directory ***
[2026-01-09 07:04:12] total 384428
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc    579449 Jan  8 23:13 pilot3.tar.gz
[2026-01-09 07:04:12] -rwx------. 1 boinc boinc     36322 Jan  8 23:13 runpilot2-wrapper.sh
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc      5112 Jan  8 23:13 queuedata.json
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:04:12] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:58 run_atlas
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:58 job.xml
[2026-01-09 07:04:12] -rw-r--r--. 2 boinc boinc 389451780 Jan  9 06:58 EVNT.47962006._000055.pool.root.1
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc      6595 Jan  9 06:58 init_data.xml
[2026-01-09 07:04:12] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:58 start_atlas.sh
[2026-01-09 07:04:12] drwxrwx--x. 2 boinc boinc      4096 Jan  9 06:58 shared
[2026-01-09 07:04:12] -rw-r--r--. 2 boinc boinc    592613 Jan  9 06:58 input.tar.gz
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:58 boinc_lockfile
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc      2890 Jan  9 06:58 pandaJob.out
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc    989377 Jan  9 06:59 agis_schedconf.cvmfs.json
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc   1516240 Jan  9 06:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:04:12] drwx------. 5 boinc boinc      4096 Jan  9 06:59 pilot3
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc       524 Jan  9 07:01 boinc_task_state.xml
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc      1018 Jan  9 07:01 memory_monitor_summary.json
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc     48465 Jan  9 07:01 log.47962010._000545.job.log.tgz.1
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc        95 Jan  9 07:03 pilot_heartbeat.json
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc     10334 Jan  9 07:03 heartbeat.json
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc      8192 Jan  9 07:04 boinc_mmap_file
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc        23 Jan  9 07:04 wrapper_checkpoint.txt
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc      4822 Jan  9 07:04 pilotlog.txt
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc     95680 Jan  9 07:04 log.47962010._000545.job.log.1
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc       186 Jan  9 07:04 output.list
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc       620 Jan  9 07:04 runtime_log
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc    163840 Jan  9 07:04 result.tar.gz
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc      8636 Jan  9 07:04 runtime_log.err
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc       647 Jan  9 07:04 7GgNDm3rLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYQmKDmjCY1hn.diag
[2026-01-09 07:04:12] -rw-r--r--. 1 boinc boinc     22324 Jan  9 07:04 stderr.txt
[2026-01-09 07:04:12] No HITS result produced
[2026-01-09 07:04:12]  *** Contents of shared directory: ***
[2026-01-09 07:04:12] total 381088
[2026-01-09 07:04:12] -rw-r--r--. 2 boinc boinc 389451780 Jan  9 06:58 ATLAS.root_0
[2026-01-09 07:04:12] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:58 start_atlas.sh
[2026-01-09 07:04:12] -rw-r--r--. 2 boinc boinc    592613 Jan  9 06:58 input.tar.gz
[2026-01-09 07:04:12] -rw-------. 1 boinc boinc    163840 Jan  9 07:04 result.tar.gz
07:04:13 (374328): run_atlas exited; CPU time 40.665806
07:04:13 (374328): called boinc_finish(0)

</stderr_txt>
]]>

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