Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:03:38 (809618): wrapper (7.7.26015): starting
10:03:38 (809618): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:03:38] Arguments: --nthreads 8
[2026-01-09 10:03:38] Threads: 8
[2026-01-09 10:03:38] Checking for CVMFS
[2026-01-09 10:03:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:03:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:03:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:03:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:03:39] 2.13.3.0 6683 14144 173000 154946 3 505 32436852 40960001 18024 16776704 0 19467876 99.740 16178973 39996 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:03:39] CVMFS is ok
[2026-01-09 10:03:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:03:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:03:39] Further information can be found at the LHC@home message board.
[2026-01-09 10:03:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:03:39] Checking for apptainer binary...
[2026-01-09 10:03:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:03:39] Running /usr/bin/apptainer --version
[2026-01-09 10:03:39] apptainer version 1.4.5-2.el9
[2026-01-09 10:03:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:03:39] c-211-35-3.aglt2.org
[2026-01-09 10:03:39] apptainer works
[2026-01-09 10:03:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:03:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:03:40] Starting ATLAS job with PandaID=6963186688
[2026-01-09 10:03:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:57:03]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:57:03] 2026-01-09 21:56:09,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,287 | INFO     | time since job start (24719s) is within the limit (349056.0s)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,377 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 16:57:03] 2026-01-09 21:56:11,397 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2694.6153333333336
[2026-01-09 16:57:03] 2026-01-09 21:56:11,457 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963186688/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,458 | INFO     | extracted standard info from prmon json
[2026-01-09 16:57:03] 2026-01-09 21:56:11,458 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:57:03] 2026-01-09 21:56:11,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:57:03] 2026-01-09 21:56:11,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:57:03] 2026-01-09 21:56:11,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:57:03] 2026-01-09 21:56:11,474 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:57:03] 2026-01-09 21:56:11,479 | INFO     | sum of square deviations: 20446693751.05697
[2026-01-09 16:57:03] 2026-01-09 21:56:11,483 | INFO     | sum of deviations: 116572377719.69812
[2026-01-09 16:57:03] 2026-01-09 21:56:11,483 | INFO     | mean x: 1767983413.121287
[2026-01-09 16:57:03] 2026-01-09 21:56:11,483 | INFO     | mean y: 2522437.9653465347
[2026-01-09 16:57:03] 2026-01-09 21:56:11,483 | INFO     | intersect: -10077250494.80437
[2026-01-09 16:57:03] 2026-01-09 21:56:11,483 | INFO     | chi2: 2.3348929404646275
[2026-01-09 16:57:03] 2026-01-09 21:56:11,484 | INFO     | sum of square deviations: 19696871862.09528
[2026-01-09 16:57:03] 2026-01-09 21:56:11,488 | INFO     | sum of deviations: 140167871674.57135
[2026-01-09 16:57:03] 2026-01-09 21:56:11,488 | INFO     | mean x: 1767983260.6190476
[2026-01-09 16:57:03] 2026-01-09 21:56:11,488 | INFO     | mean y: 2527184.5563909775
[2026-01-09 16:57:03] 2026-01-09 21:56:11,488 | INFO     | intersect: -12578884347.806562
[2026-01-09 16:57:03] 2026-01-09 21:56:11,489 | INFO     | chi2: 1.6482595688373562
[2026-01-09 16:57:03] 2026-01-09 21:56:11,489 | INFO     | current chi2=1.6482595688373562 (change=29.407488443159025 %)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,489 | INFO     | sum of square deviations: 18965607606.62932
[2026-01-09 16:57:03] 2026-01-09 21:56:11,493 | INFO     | sum of deviations: 137534570632.30472
[2026-01-09 16:57:03] 2026-01-09 21:56:11,493 | INFO     | mean x: 1767983108.1167512
[2026-01-09 16:57:03] 2026-01-09 21:56:11,493 | INFO     | mean y: 2526635.3629441625
[2026-01-09 16:57:03] 2026-01-09 21:56:11,493 | INFO     | intersect: -12818512516.317606
[2026-01-09 16:57:03] 2026-01-09 21:56:11,494 | INFO     | chi2: 1.648107448905577
[2026-01-09 16:57:03] 2026-01-09 21:56:11,494 | INFO     | current chi2=1.648107448905577 (change=0.009229124748029118 %)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,494 | INFO     | right removable region: 393
[2026-01-09 16:57:03] 2026-01-09 21:56:11,495 | INFO     | sum of square deviations: 19696817089.102787
[2026-01-09 16:57:03] 2026-01-09 21:56:11,498 | INFO     | sum of deviations: 46423624576.964935
[2026-01-09 16:57:03] 2026-01-09 21:56:11,498 | INFO     | mean x: 1767983565.6290727
[2026-01-09 16:57:03] 2026-01-09 21:56:11,499 | INFO     | mean y: 2536641.1754385964
[2026-01-09 16:57:03] 2026-01-09 21:56:11,499 | INFO     | intersect: -4164441451.666596
[2026-01-09 16:57:03] 2026-01-09 21:56:11,499 | INFO     | chi2: 0.8562587211620273
[2026-01-09 16:57:03] 2026-01-09 21:56:11,499 | INFO     | current chi2=0.8562587211620273 (change=63.32770953551139 %)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,500 | INFO     | sum of square deviations: 18965498914.598934
[2026-01-09 16:57:03] 2026-01-09 21:56:11,504 | INFO     | sum of deviations: 26357304441.19287
[2026-01-09 16:57:03] 2026-01-09 21:56:11,504 | INFO     | mean x: 1767983718.1370559
[2026-01-09 16:57:03] 2026-01-09 21:56:11,504 | INFO     | mean y: 2540825.459390863
[2026-01-09 16:57:03] 2026-01-09 21:56:11,504 | INFO     | intersect: -2454514763.525939
[2026-01-09 16:57:03] 2026-01-09 21:56:11,504 | INFO     | chi2: 0.7836620130405413
[2026-01-09 16:57:03] 2026-01-09 21:56:11,505 | INFO     | current chi2=0.7836620130405413 (change=8.47836130918061 %)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,505 | INFO     | left removable region: 20
[2026-01-09 16:57:03] 2026-01-09 21:56:11,505 | INFO     | sum of square deviations: 16091498566.991983
[2026-01-09 16:57:03] 2026-01-09 21:56:11,509 | INFO     | sum of deviations: 34529493130.89812
[2026-01-09 16:57:03] 2026-01-09 21:56:11,509 | INFO     | mean x: 1767983687.6487935
[2026-01-09 16:57:03] 2026-01-09 21:56:11,509 | INFO     | mean y: 2548752.8847184987
[2026-01-09 16:57:03] 2026-01-09 21:56:11,509 | INFO     | intersect: -3791229703.73672
[2026-01-09 16:57:03] 2026-01-09 21:56:11,509 | INFO     | chi2: 0.037964249344239656
[2026-01-09 16:57:03] 2026-01-09 21:56:11,510 | INFO     | current memory leak: 2.15 B/s (using 373 data points, chi2=0.04)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,510 | INFO     | could have reported an average CPU frequency of 2666 MHz (17 samples)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,510 | INFO     | ..............................
[2026-01-09 16:57:03] 2026-01-09 21:56:11,510 | INFO     | . Timing measurements:
[2026-01-09 16:57:03] 2026-01-09 21:56:11,511 | INFO     | . get job = 0 s
[2026-01-09 16:57:03] 2026-01-09 21:56:11,511 | INFO     | . initial setup = 3 s
[2026-01-09 16:57:03] 2026-01-09 21:56:11,511 | INFO     | . payload setup = 18 s
[2026-01-09 16:57:03] 2026-01-09 21:56:11,511 | INFO     | . stage-in = 0 s
[2026-01-09 16:57:03] 2026-01-09 21:56:11,511 | INFO     | . payload execution = 24623 s
[2026-01-09 16:57:03] 2026-01-09 21:56:11,511 | INFO     | . stage-out = 5 s
[2026-01-09 16:57:03] 2026-01-09 21:56:11,511 | INFO     | . log creation = 1 s
[2026-01-09 16:57:03] 2026-01-09 21:56:11,511 | INFO     | ..............................
[2026-01-09 16:57:03] 2026-01-09 21:56:11,605 | INFO     | 
[2026-01-09 16:57:03] 2026-01-09 21:56:11,606 | INFO     | job summary report
[2026-01-09 16:57:03] 2026-01-09 21:56:11,606 | INFO     | --------------------------------------------------
[2026-01-09 16:57:03] 2026-01-09 21:56:11,606 | INFO     | PanDA job id: 6963186688
[2026-01-09 16:57:03] 2026-01-09 21:56:11,606 | INFO     | task id: 47898826
[2026-01-09 16:57:03] 2026-01-09 21:56:11,606 | INFO     | errors: (none)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,606 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:57:03] 2026-01-09 21:56:11,606 | INFO     | pilot state: finished 
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | transexitcode: 0
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | exeerrorcode: 0
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | exeerrordiag: 
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | exitcode: 0
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | exitmsg: OK
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | cpuconsumptiontime: 59895 s
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | nevents: 400
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | neventsw: 0
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | pid: 829584
[2026-01-09 16:57:03] 2026-01-09 21:56:11,607 | INFO     | pgrp: 829584
[2026-01-09 16:57:03] 2026-01-09 21:56:11,608 | INFO     | corecount: 8
[2026-01-09 16:57:03] 2026-01-09 21:56:11,608 | INFO     | event service: False
[2026-01-09 16:57:03] 2026-01-09 21:56:11,608 | INFO     | sizes: {0: 2283743, 1: 2283998, 12: 2283998, 15: 2284288, 23: 2284316, 24646: 2320385, 24647: 2320512, 24654: 2329566, 24657: 2329622, 24681: 2329880}
[2026-01-09 16:57:03] 2026-01-09 21:56:11,608 | INFO     | --------------------------------------------------
[2026-01-09 16:57:03] 2026-01-09 21:56:11,608 | INFO     | 
[2026-01-09 16:57:03] 2026-01-09 21:56:11,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 16:57:03] 2026-01-09 21:56:11,676 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,677 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:57:03] 2026-01-09 21:56:11,678 | INFO     | job 6963186688 has completed (purged errors)
[2026-01-09 16:57:03] 2026-01-09 21:56:11,678 | INFO     | overall cleanup function is called
[2026-01-09 16:57:03] 2026-01-09 21:56:12,691 | INFO     | --- collectZombieJob: --- 10, [829584]
[2026-01-09 16:57:03] 2026-01-09 21:56:12,692 | INFO     | zombie collector waiting for pid 829584
[2026-01-09 16:57:03] 2026-01-09 21:56:12,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:57:03] 2026-01-09 21:56:12,692 | INFO     | collected zombie processes
[2026-01-09 16:57:03] 2026-01-09 21:56:12,692 | INFO     | will attempt to kill all subprocesses of pid=829584
[2026-01-09 16:57:03] 2026-01-09 21:56:13,375 | INFO     | process IDs to be killed: [829584] (in reverse order)
[2026-01-09 16:57:03] 2026-01-09 21:56:13,683 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:57:03] 2026-01-09 21:56:13,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:57:03] 2026-01-09 21:56:13,713 | INFO     | did not find any defunct processes belonging to 829584
[2026-01-09 16:57:03] 2026-01-09 21:56:13,737 | INFO     | did not find any defunct processes belonging to 829584
[2026-01-09 16:57:03] 2026-01-09 21:56:13,738 | INFO     | ready for new job
[2026-01-09 16:57:03] 2026-01-09 21:56:13,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:57:03] 2026-01-09 21:56:13,745 | INFO     | ***************************************
[2026-01-09 16:57:03] 2026-01-09 21:56:13,745 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:57:03] 2026-01-09 21:56:13,745 | INFO     | ***************************************
[2026-01-09 16:57:03] 2026-01-09 21:56:13,745 | INFO     | 
[2026-01-09 16:57:03] 2026-01-09 21:56:13,754 | INFO     | architecture information:
[2026-01-09 16:57:03] 2026-01-09 21:56:13,759 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:57:03] 2026-01-09 21:56:13,806 | INFO     | cat /etc/os-release:
[2026-01-09 16:57:03] NAME="CentOS Linux"
[2026-01-09 16:57:03] VERSION="7 (Core)"
[2026-01-09 16:57:03] ID="centos"
[2026-01-09 16:57:03] ID_LIKE="rhel fedora"
[2026-01-09 16:57:03] VERSION_ID="7"
[2026-01-09 16:57:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:57:03] ANSI_COLOR="0;31"
[2026-01-09 16:57:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:57:03] HOME_URL="https://www.centos.org/"
[2026-01-09 16:57:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:57:03] 
[2026-01-09 16:57:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:57:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:57:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:57:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:57:03] 
[2026-01-09 16:57:03] 2026-01-09 21:56:13,806 | INFO     | ***************************************
[2026-01-09 16:57:03] 2026-01-09 21:56:14,310 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 16:57:03] 2026-01-09 21:56:14,389 | INFO     | sufficient remaining disk space (125754671104 B)
[2026-01-09 16:57:03] 2026-01-09 21:56:14,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:57:03] 2026-01-09 21:56:14,389 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:57:03] 2026-01-09 21:56:14,389 | INFO     | update_server=False
[2026-01-09 16:57:03] 2026-01-09 21:56:14,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:57:03] 2026-01-09 21:56:14,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:57:03] 2026-01-09 21:56:14,390 | INFO     | aborting loop
[2026-01-09 16:57:03] 2026-01-09 21:56:14,494 | INFO     | all data control threads have been joined
[2026-01-09 16:57:03] 2026-01-09 21:56:15,102 | INFO     | all job control threads have been joined
[2026-01-09 16:57:03] 2026-01-09 21:56:15,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:57:03] 2026-01-09 21:56:15,396 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:15,396 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:15,501 | INFO     | [data] control thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:15,683 | INFO     | all payload control threads have been joined
[2026-01-09 16:57:03] 2026-01-09 21:56:15,779 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:15,953 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:16,109 | INFO     | [job] control thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:16,281 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:16,395 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:16,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:57:03] 2026-01-09 21:56:16,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:57:03] 2026-01-09 21:56:16,688 | INFO     | [payload] control thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:16,804 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:16,808 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:16,812 | INFO     | [job] validate thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:16,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:17,180 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:17,625 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:20,407 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:57:03] 2026-01-09 21:56:45,099 | INFO     | PID=818447 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 16:57:03] 2026-01-09 21:56:45,099 | INFO     | .. there are 17 such processes running
[2026-01-09 16:57:03] 2026-01-09 21:56:45,099 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:57:03] 2026-01-09 21:56:45,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:57:03] 2026-01-09 21:56:45,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:57:03] 2026-01-09 21:56:55,337 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:57:03] 2026-01-09 21:56:56,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140070498740032)>', '<ExcThread(monitor, started 140070107453184)>']
[2026-01-09 16:57:03] 2026-01-09 21:56:57,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:57:03] 2026-01-09 21:56:57,189 | INFO     | [monitor] control thread has ended
[2026-01-09 16:57:03] 2026-01-09 21:57:01,703 | INFO     | all workflow threads have been joined
[2026-01-09 16:57:03] 2026-01-09 21:57:01,704 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:57:03] 2026-01-09 21:57:01,704 | INFO     | traces error code: 0
[2026-01-09 16:57:03] 2026-01-09 21:57:01,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:57:03] 2026-01-09 21:57:03,062 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:57:03] 2026-01-09 21:57:03,081 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:57:03] 2026-01-09 21:57:03,097 [wrapper] pilotpid: 818447
[2026-01-09 16:57:03] 2026-01-09 21:57:03,119 [wrapper] Pilot exit status: 0
[2026-01-09 16:57:03] 2026-01-09 21:57:03,182 [wrapper] pandaids: 6963186688
[2026-01-09 16:57:03] 2026-01-09 21:57:03,287 [wrapper] cleanup supervisor_pilot 1712389 818448
[2026-01-09 16:57:03] 2026-01-09 21:57:03,292 [wrapper] Test setup, not cleaning
[2026-01-09 16:57:03] 2026-01-09 21:57:03,294 [wrapper] apfmon messages muted
[2026-01-09 16:57:03] 2026-01-09 21:57:03,298 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:57:03] 2026-01-09 21:57:03,300 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:57:03]  *** Error codes and diagnostics ***
[2026-01-09 16:57:03]     "exeErrorCode": 0,
[2026-01-09 16:57:03]     "exeErrorDiag": "",
[2026-01-09 16:57:03]     "pilotErrorCode": 0,
[2026-01-09 16:57:03]     "pilotErrorDiag": "",
[2026-01-09 16:57:03]  *** Listing of results directory ***
[2026-01-09 16:57:03] total 447888
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 16:57:03] -rwx------. 1 boincer umatlas     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:01 queuedata.json
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:57:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:03 run_atlas
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:03 job.xml
[2026-01-09 16:57:03] -rw-r--r--. 2 boincer umatlas 226201084 Jan  9 10:03 EVNT.47898824._001405.pool.root.1
[2026-01-09 16:57:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:03 start_atlas.sh
[2026-01-09 16:57:03] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:03 shared
[2026-01-09 16:57:03] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 10:03 input.tar.gz
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:03 boinc_lockfile
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 10:03 pandaJob.out
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas        57 Jan  9 10:03 setup.sh.local
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas    989377 Jan  9 10:04 agis_schedconf.cvmfs.json
[2026-01-09 16:57:03] drwx------. 5 boincer umatlas      4096 Jan  9 10:04 pilot3
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas      6859 Jan  9 16:46 init_data.xml
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas 220871618 Jan  9 16:54 HITS.47898826._036664.pool.root.1
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas       531 Jan  9 16:54 boinc_task_state.xml
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas      1041 Jan  9 16:55 memory_monitor_summary.json
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:55 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas    600454 Jan  9 16:55 log.47898826._036664.job.log.tgz.1
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas        95 Jan  9 16:56 pilot_heartbeat.json
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas      7826 Jan  9 16:56 heartbeat.json
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas        28 Jan  9 16:56 wrapper_checkpoint.txt
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:56 boinc_mmap_file
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas      4824 Jan  9 16:57 pilotlog.txt
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas   3224245 Jan  9 16:57 log.47898826._036664.job.log.1
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas       357 Jan  9 16:57 output.list
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:57 runtime_log
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas   3840000 Jan  9 16:57 result.tar.gz
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas      9353 Jan  9 16:57 runtime_log.err
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas       659 Jan  9 16:57 7fbLDmO0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjfgKDmTkZd4n.diag
[2026-01-09 16:57:03] -rw-r--r--. 1 boincer umatlas     21229 Jan  9 16:57 stderr.txt
[2026-01-09 16:57:03] HITS file was successfully produced:
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas 220871618 Jan  9 16:54 shared/HITS.pool.root.1
[2026-01-09 16:57:03]  *** Contents of shared directory: ***
[2026-01-09 16:57:03] total 440952
[2026-01-09 16:57:03] -rw-r--r--. 2 boincer umatlas 226201084 Jan  9 10:03 ATLAS.root_0
[2026-01-09 16:57:03] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:03 start_atlas.sh
[2026-01-09 16:57:03] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 10:03 input.tar.gz
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas 220871618 Jan  9 16:54 HITS.pool.root.1
[2026-01-09 16:57:03] -rw-------. 1 boincer umatlas   3840000 Jan  9 16:57 result.tar.gz
16:57:05 (809618): run_atlas exited; CPU time 60863.303316
16:57:05 (809618): called boinc_finish(0)

</stderr_txt>
]]>

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