Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:58:38 (2342): wrapper (7.7.26015): starting
09:58:38 (2342): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:58:38] Arguments: --nthreads 8
[2026-01-09 09:58:38] Threads: 8
[2026-01-09 09:58:38] Checking for CVMFS
[2026-01-09 09:58:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:58:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:58:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:58:38] 2.11.2.0 11495 181211 135432 154946 1 188 11391109 18432000 1833 130560 0 118428897 99.979 7054661 28008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 09:58:38] CVMFS is ok
[2026-01-09 09:58:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:58:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:58:38] Further information can be found at the LHC@home message board.
[2026-01-09 09:58:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:58:38] Checking for apptainer binary...
[2026-01-09 09:58:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:58:38] Running /usr/bin/apptainer --version
[2026-01-09 09:58:38] apptainer version 1.3.2-1.el7
[2026-01-09 09:58:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:58:39] c-206-31.aglt2.org
[2026-01-09 09:58:39] apptainer works
[2026-01-09 09:58:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:58:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:58:39] Starting ATLAS job with PandaID=6963168812
[2026-01-09 09:58:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:08:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:08:21] 2026-01-09 19:07:26,503 | INFO     | monitor loop #1070: job 0:6963168812 is in state 'finished'
[2026-01-09 14:08:21] 2026-01-09 19:07:26,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:08:21] 2026-01-09 19:07:26,728 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 14:08:21] 2026-01-09 19:07:26,735 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2372.5416666666665
[2026-01-09 14:08:21] 2026-01-09 19:07:26,739 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963168812/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:08:21] 2026-01-09 19:07:26,740 | INFO     | extracted standard info from prmon json
[2026-01-09 14:08:21] 2026-01-09 19:07:26,740 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:08:21] 2026-01-09 19:07:26,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:08:21] 2026-01-09 19:07:26,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:08:21] 2026-01-09 19:07:26,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:08:21] 2026-01-09 19:07:26,748 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:08:21] 2026-01-09 19:07:26,749 | INFO     | sum of square deviations: 4504437945.0
[2026-01-09 14:08:21] 2026-01-09 19:07:26,751 | INFO     | sum of deviations: 57847065763.5
[2026-01-09 14:08:21] 2026-01-09 19:07:26,751 | INFO     | mean x: 1767978169.5
[2026-01-09 14:08:21] 2026-01-09 19:07:26,752 | INFO     | mean y: 2463498.12704918
[2026-01-09 14:08:21] 2026-01-09 19:07:26,752 | INFO     | intersect: -22702333568.291157
[2026-01-09 14:08:21] 2026-01-09 19:07:26,752 | INFO     | chi2: 1.5130591451809552
[2026-01-09 14:08:21] 2026-01-09 19:07:26,753 | INFO     | sum of square deviations: 4233158440.0
[2026-01-09 14:08:21] 2026-01-09 19:07:26,755 | INFO     | sum of deviations: 56394688124.00001
[2026-01-09 14:08:21] 2026-01-09 19:07:26,755 | INFO     | mean x: 1767978017.0
[2026-01-09 14:08:21] 2026-01-09 19:07:26,756 | INFO     | mean y: 2462681.761506276
[2026-01-09 14:08:21] 2026-01-09 19:07:26,756 | INFO     | intersect: -23550770747.13018
[2026-01-09 14:08:21] 2026-01-09 19:07:26,756 | INFO     | chi2: 1.5129864467079586
[2026-01-09 14:08:21] 2026-01-09 19:07:26,757 | INFO     | current chi2=1.5129864467079586 (change=0.004804734383858445 %)
[2026-01-09 14:08:21] 2026-01-09 19:07:26,757 | INFO     | right removable region: 238
[2026-01-09 14:08:21] 2026-01-09 19:07:26,757 | INFO     | sum of square deviations: 4233158440.0
[2026-01-09 14:08:21] 2026-01-09 19:07:26,759 | INFO     | sum of deviations: 18458081133.999996
[2026-01-09 14:08:21] 2026-01-09 19:07:26,760 | INFO     | mean x: 1767978322.0
[2026-01-09 14:08:21] 2026-01-09 19:07:26,760 | INFO     | mean y: 2485462.769874477
[2026-01-09 14:08:21] 2026-01-09 19:07:26,760 | INFO     | intersect: -7706530812.706261
[2026-01-09 14:08:21] 2026-01-09 19:07:26,761 | INFO     | chi2: 0.0646955817639732
[2026-01-09 14:08:21] 2026-01-09 19:07:26,761 | INFO     | current chi2=0.0646955817639732 (change=95.72418685878695 %)
[2026-01-09 14:08:21] 2026-01-09 19:07:26,761 | INFO     | sum of square deviations: 3972995422.5
[2026-01-09 14:08:21] 2026-01-09 19:07:26,763 | INFO     | sum of deviations: 9277415549.499998
[2026-01-09 14:08:21] 2026-01-09 19:07:26,764 | INFO     | mean x: 1767978474.5
[2026-01-09 14:08:21] 2026-01-09 19:07:26,764 | INFO     | mean y: 2490810.311965812
[2026-01-09 14:08:21] 2026-01-09 19:07:26,764 | INFO     | intersect: -4125948628.006462
[2026-01-09 14:08:21] 2026-01-09 19:07:26,765 | INFO     | chi2: 0.001024698593585757
[2026-01-09 14:08:21] 2026-01-09 19:07:26,765 | INFO     | current chi2=0.001024698593585757 (change=98.41612276194667 %)
[2026-01-09 14:08:21] 2026-01-09 19:07:26,765 | INFO     | sum of square deviations: 3723716330.0
[2026-01-09 14:08:21] 2026-01-09 19:07:26,768 | INFO     | sum of deviations: 8291873594.000001
[2026-01-09 14:08:21] 2026-01-09 19:07:26,768 | INFO     | mean x: 1767978627.0
[2026-01-09 14:08:21] 2026-01-09 19:07:26,768 | INFO     | mean y: 2491410.4497816595
[2026-01-09 14:08:21] 2026-01-09 19:07:26,768 | INFO     | intersect: -3934396900.2604156
[2026-01-09 14:08:21] 2026-01-09 19:07:26,769 | INFO     | chi2: 0.0008174453723887578
[2026-01-09 14:08:21] 2026-01-09 19:07:26,769 | INFO     | current chi2=0.0008174453723887578 (change=20.22577394897675 %)
[2026-01-09 14:08:21] 2026-01-09 19:07:26,769 | INFO     | left removable region: 30
[2026-01-09 14:08:21] 2026-01-09 19:07:26,770 | INFO     | sum of square deviations: 2790348132.0
[2026-01-09 14:08:21] 2026-01-09 19:07:26,771 | INFO     | sum of deviations: 5386668653.5
[2026-01-09 14:08:21] 2026-01-09 19:07:26,772 | INFO     | mean x: 1767978901.5
[2026-01-09 14:08:21] 2026-01-09 19:07:26,772 | INFO     | mean y: 2492859.168269231
[2026-01-09 14:08:21] 2026-01-09 19:07:26,772 | INFO     | intersect: -3410528053.7216835
[2026-01-09 14:08:21] 2026-01-09 19:07:26,772 | INFO     | chi2: 0.00027905748404333637
[2026-01-09 14:08:21] 2026-01-09 19:07:26,773 | INFO     | current memory leak: 1.93 B/s (using 208 data points, chi2=0.00)
[2026-01-09 14:08:21] 2026-01-09 19:07:26,773 | INFO     | could have reported an average CPU frequency of 2557 MHz (12 samples)
[2026-01-09 14:08:21] 2026-01-09 19:07:26,774 | INFO     | ..............................
[2026-01-09 14:08:21] 2026-01-09 19:07:26,774 | INFO     | . Timing measurements:
[2026-01-09 14:08:21] 2026-01-09 19:07:26,774 | INFO     | . get job = 0 s
[2026-01-09 14:08:21] 2026-01-09 19:07:26,774 | INFO     | . initial setup = 2 s
[2026-01-09 14:08:21] 2026-01-09 19:07:26,774 | INFO     | . payload setup = 4 s
[2026-01-09 14:08:21] 2026-01-09 19:07:26,775 | INFO     | . stage-in = 0 s
[2026-01-09 14:08:21] 2026-01-09 19:07:26,775 | INFO     | . payload execution = 14880 s
[2026-01-09 14:08:21] 2026-01-09 19:07:26,775 | INFO     | . stage-out = 2 s
[2026-01-09 14:08:21] 2026-01-09 19:07:26,775 | INFO     | . log creation = 0 s
[2026-01-09 14:08:21] 2026-01-09 19:07:26,775 | INFO     | ..............................
[2026-01-09 14:08:21] 2026-01-09 19:07:27,414 | INFO     | 
[2026-01-09 14:08:21] 2026-01-09 19:07:27,414 | INFO     | job summary report
[2026-01-09 14:08:21] 2026-01-09 19:07:27,414 | INFO     | --------------------------------------------------
[2026-01-09 14:08:21] 2026-01-09 19:07:27,414 | INFO     | PanDA job id: 6963168812
[2026-01-09 14:08:21] 2026-01-09 19:07:27,414 | INFO     | task id: 47898826
[2026-01-09 14:08:21] 2026-01-09 19:07:27,415 | INFO     | errors: (none)
[2026-01-09 14:08:21] 2026-01-09 19:07:27,415 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:08:21] 2026-01-09 19:07:27,415 | INFO     | pilot state: finished 
[2026-01-09 14:08:21] 2026-01-09 19:07:27,415 | INFO     | transexitcode: 0
[2026-01-09 14:08:21] 2026-01-09 19:07:27,415 | INFO     | exeerrorcode: 0
[2026-01-09 14:08:21] 2026-01-09 19:07:27,415 | INFO     | exeerrordiag: 
[2026-01-09 14:08:21] 2026-01-09 19:07:27,416 | INFO     | exitcode: 0
[2026-01-09 14:08:21] 2026-01-09 19:07:27,416 | INFO     | exitmsg: OK
[2026-01-09 14:08:21] 2026-01-09 19:07:27,416 | INFO     | cpuconsumptiontime: 113465 s
[2026-01-09 14:08:21] 2026-01-09 19:07:27,416 | INFO     | nevents: 400
[2026-01-09 14:08:21] 2026-01-09 19:07:27,416 | INFO     | neventsw: 0
[2026-01-09 14:08:21] 2026-01-09 19:07:27,416 | INFO     | pid: 13627
[2026-01-09 14:08:21] 2026-01-09 19:07:27,417 | INFO     | pgrp: 13627
[2026-01-09 14:08:21] 2026-01-09 19:07:27,417 | INFO     | corecount: 8
[2026-01-09 14:08:21] 2026-01-09 19:07:27,417 | INFO     | event service: False
[2026-01-09 14:08:21] 2026-01-09 19:07:27,417 | INFO     | sizes: {0: 2283857, 1: 2283999, 5: 2284261, 12: 2284317, 14889: 2315190, 14892: 2324188, 14895: 2324372, 14901: 2324566}
[2026-01-09 14:08:21] 2026-01-09 19:07:27,417 | INFO     | --------------------------------------------------
[2026-01-09 14:08:21] 2026-01-09 19:07:27,418 | INFO     | 
[2026-01-09 14:08:21] 2026-01-09 19:07:27,418 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 14:08:21] 2026-01-09 19:07:27,436 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,436 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,436 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,436 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,439 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:08:21] 2026-01-09 19:07:27,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,439 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:08:21] 2026-01-09 19:07:27,440 | INFO     | job 6963168812 has completed (purged errors)
[2026-01-09 14:08:21] 2026-01-09 19:07:27,440 | INFO     | overall cleanup function is called
[2026-01-09 14:08:21] 2026-01-09 19:07:28,448 | INFO     | --- collectZombieJob: --- 10, [13627]
[2026-01-09 14:08:21] 2026-01-09 19:07:28,449 | INFO     | zombie collector waiting for pid 13627
[2026-01-09 14:08:21] 2026-01-09 19:07:28,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:08:21] 2026-01-09 19:07:28,449 | INFO     | collected zombie processes
[2026-01-09 14:08:21] 2026-01-09 19:07:28,449 | INFO     | will attempt to kill all subprocesses of pid=13627
[2026-01-09 14:08:21] 2026-01-09 19:07:28,616 | INFO     | process IDs to be killed: [13627] (in reverse order)
[2026-01-09 14:08:21] 2026-01-09 19:07:28,688 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:08:21] 2026-01-09 19:07:28,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:08:21] 2026-01-09 19:07:28,694 | INFO     | did not find any defunct processes belonging to 13627
[2026-01-09 14:08:21] 2026-01-09 19:07:28,699 | INFO     | did not find any defunct processes belonging to 13627
[2026-01-09 14:08:21] 2026-01-09 19:07:28,699 | INFO     | ready for new job
[2026-01-09 14:08:21] 2026-01-09 19:07:28,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:08:21] 2026-01-09 19:07:28,702 | INFO     | ***************************************
[2026-01-09 14:08:21] 2026-01-09 19:07:28,702 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:08:21] 2026-01-09 19:07:28,702 | INFO     | ***************************************
[2026-01-09 14:08:21] 2026-01-09 19:07:28,702 | INFO     | 
[2026-01-09 14:08:21] 2026-01-09 19:07:28,707 | INFO     | architecture information:
[2026-01-09 14:08:21] 2026-01-09 19:07:28,707 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:08:21] 2026-01-09 19:07:28,720 | INFO     | cat /etc/os-release:
[2026-01-09 14:08:21] NAME="CentOS Linux"
[2026-01-09 14:08:21] VERSION="7 (Core)"
[2026-01-09 14:08:21] ID="centos"
[2026-01-09 14:08:21] ID_LIKE="rhel fedora"
[2026-01-09 14:08:21] VERSION_ID="7"
[2026-01-09 14:08:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:08:21] ANSI_COLOR="0;31"
[2026-01-09 14:08:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:08:21] HOME_URL="https://www.centos.org/"
[2026-01-09 14:08:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:08:21] 
[2026-01-09 14:08:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:08:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:08:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:08:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:08:21] 
[2026-01-09 14:08:21] 2026-01-09 19:07:28,720 | INFO     | ***************************************
[2026-01-09 14:08:21] 2026-01-09 19:07:29,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 14:08:21] 2026-01-09 19:07:29,244 | INFO     | sufficient remaining disk space (28370272256 B)
[2026-01-09 14:08:21] 2026-01-09 19:07:29,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:08:21] 2026-01-09 19:07:29,245 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:08:21] 2026-01-09 19:07:29,245 | INFO     | update_server=False
[2026-01-09 14:08:21] 2026-01-09 19:07:29,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:08:21] 2026-01-09 19:07:29,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:08:21] 2026-01-09 19:07:29,744 | INFO     | all payload control threads have been joined
[2026-01-09 14:08:21] 2026-01-09 19:07:29,752 | INFO     | all job control threads have been joined
[2026-01-09 14:08:21] 2026-01-09 19:07:30,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:08:21] 2026-01-09 19:07:30,031 | INFO     | aborting loop
[2026-01-09 14:08:21] 2026-01-09 19:07:30,056 | INFO     | all data control threads have been joined
[2026-01-09 14:08:21] 2026-01-09 19:07:30,251 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,311 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,405 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,405 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,631 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,749 | INFO     | [payload] control thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,758 | INFO     | [job] control thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,827 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,906 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:30,933 | INFO     | [job] validate thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:31,036 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:31,061 | INFO     | [data] control thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:31,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:08:21] 2026-01-09 19:07:31,251 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:31,576 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:31,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:08:21] 2026-01-09 19:07:32,956 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:35,125 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:08:21] 2026-01-09 19:07:59,244 | INFO     | PID=6102 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 14:08:21] 2026-01-09 19:07:59,244 | INFO     | .. there are 3 such processes running
[2026-01-09 14:08:21] 2026-01-09 19:07:59,244 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:08:21] 2026-01-09 19:07:59,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:08:21] 2026-01-09 19:07:59,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:08:21] 2026-01-09 19:08:14,732 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:08:21] 2026-01-09 19:08:16,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139019929408)>', '<ExcThread(monitor, started 140138566887168)>']
[2026-01-09 14:08:21] 2026-01-09 19:08:17,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:08:21] 2026-01-09 19:08:17,335 | INFO     | [monitor] control thread has ended
[2026-01-09 14:08:21] 2026-01-09 19:08:21,584 | INFO     | all workflow threads have been joined
[2026-01-09 14:08:21] 2026-01-09 19:08:21,584 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:08:21] 2026-01-09 19:08:21,584 | INFO     | traces error code: 0
[2026-01-09 14:08:21] 2026-01-09 19:08:21,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:08:21] 2026-01-09 19:08:21,693 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:08:21] 2026-01-09 19:08:21,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:08:21] 2026-01-09 19:08:21,698 [wrapper] pilotpid: 6102
[2026-01-09 14:08:21] 2026-01-09 19:08:21,700 [wrapper] Pilot exit status: 0
[2026-01-09 14:08:21] 2026-01-09 19:08:21,708 [wrapper] pandaids: 6963168812
[2026-01-09 14:08:21] 2026-01-09 19:08:21,735 [wrapper] cleanup supervisor_pilot  2211 6103
[2026-01-09 14:08:21] 2026-01-09 19:08:21,737 [wrapper] Test setup, not cleaning
[2026-01-09 14:08:21] 2026-01-09 19:08:21,739 [wrapper] apfmon messages muted
[2026-01-09 14:08:21] 2026-01-09 19:08:21,741 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:08:21] 2026-01-09 19:08:21,743 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:08:21]  *** Error codes and diagnostics ***
[2026-01-09 14:08:21]     "exeErrorCode": 0,
[2026-01-09 14:08:21]     "exeErrorDiag": "",
[2026-01-09 14:08:21]     "pilotErrorCode": 0,
[2026-01-09 14:08:21]     "pilotErrorDiag": "",
[2026-01-09 14:08:21]  *** Listing of results directory ***
[2026-01-09 14:08:21] total 445864
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 14:08:21] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas       100 Jan  9 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:08:21] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 09:58 run_atlas
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas       105 Jan  9 09:58 job.xml
[2026-01-09 14:08:21] -rw-r--r-- 2 boincer umatlas 223485985 Jan  9 09:58 EVNT.47898824._001392.pool.root.1
[2026-01-09 14:08:21] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:58 start_atlas.sh
[2026-01-09 14:08:21] drwxrwx--x 2 boincer umatlas      4096 Jan  9 09:58 shared
[2026-01-09 14:08:21] -rw-r--r-- 2 boincer umatlas    592404 Jan  9 09:58 input.tar.gz
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas         0 Jan  9 09:58 boinc_lockfile
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 09:58 pandaJob.out
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas        57 Jan  9 09:58 setup.sh.local
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas    989377 Jan  9 09:58 agis_schedconf.cvmfs.json
[2026-01-09 14:08:21] drwx------ 5 boincer umatlas      4096 Jan  9 09:58 pilot3
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 14:04 init_data.xml
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas 224054607 Jan  9 14:06 HITS.47898826._036339.pool.root.1
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas        95 Jan  9 14:07 pilot_heartbeat.json
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas       532 Jan  9 14:07 boinc_task_state.xml
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas      1054 Jan  9 14:07 memory_monitor_summary.json
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas   1516240 Jan  9 14:07 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas    477126 Jan  9 14:07 log.47898826._036339.job.log.tgz.1
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas      7859 Jan  9 14:07 heartbeat.json
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas        29 Jan  9 14:08 wrapper_checkpoint.txt
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 14:08 boinc_mmap_file
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas      4820 Jan  9 14:08 pilotlog.txt
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas   2075164 Jan  9 14:08 log.47898826._036339.job.log.1
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas       357 Jan  9 14:08 output.list
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas       620 Jan  9 14:08 runtime_log
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas   2570240 Jan  9 14:08 result.tar.gz
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas       662 Jan  9 14:08 uk0NDmC0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmegKDmOsJ4Sn.diag
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 14:08 runtime_log.err
[2026-01-09 14:08:21] -rw-r--r-- 1 boincer umatlas     21104 Jan  9 14:08 stderr.txt
[2026-01-09 14:08:21] HITS file was successfully produced:
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas 224054607 Jan  9 14:06 shared/HITS.pool.root.1
[2026-01-09 14:08:21]  *** Contents of shared directory: ***
[2026-01-09 14:08:21] total 440172
[2026-01-09 14:08:21] -rw-r--r-- 2 boincer umatlas 223485985 Jan  9 09:58 ATLAS.root_0
[2026-01-09 14:08:21] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:58 start_atlas.sh
[2026-01-09 14:08:21] -rw-r--r-- 2 boincer umatlas    592404 Jan  9 09:58 input.tar.gz
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas 224054607 Jan  9 14:06 HITS.pool.root.1
[2026-01-09 14:08:21] -rw------- 1 boincer umatlas   2570240 Jan  9 14:08 result.tar.gz
14:08:23 (2342): run_atlas exited; CPU time 113623.514722
14:08:23 (2342): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN