Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:17 (13493): wrapper (7.7.26015): starting
10:22:17 (13493): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:22:17] Arguments: --nthreads 8
[2026-01-09 10:22:17] Threads: 8
[2026-01-09 10:22:17] Checking for CVMFS
[2026-01-09 10:22:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:22:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:22:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:22:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:22:17] 2.11.2.0 8814 181195 135832 154948 3 57 12046909 18432000 1833 130560 0 121571430 99.979 7087529 33689 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:22:17] CVMFS is ok
[2026-01-09 10:22:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:22:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:22:17] Further information can be found at the LHC@home message board.
[2026-01-09 10:22:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:22:17] Checking for apptainer binary...
[2026-01-09 10:22:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:22:17] Running /usr/bin/apptainer --version
[2026-01-09 10:22:17] apptainer version 1.3.2-1.el7
[2026-01-09 10:22:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:22:18] c-206-19.aglt2.org
[2026-01-09 10:22:18] apptainer works
[2026-01-09 10:22:18] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:22:18] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:22:18] Starting ATLAS job with PandaID=6963168784
[2026-01-09 10:22:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:42:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:42:01] 2026-01-09 19:41:11,700 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 14:42:01] 2026-01-09 19:41:11,700 | INFO     | log transfer has been attempted: DONE
[2026-01-09 14:42:01] 2026-01-09 19:41:11,701 | INFO     | job 6963168784 has finished - writing final server update
[2026-01-09 14:42:01] 2026-01-09 19:41:11,701 | INFO     | total number of processed events: 400 (read)
[2026-01-09 14:42:01] 2026-01-09 19:41:11,702 | INFO     | executing command: lscpu
[2026-01-09 14:42:01] 2026-01-09 19:41:11,735 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 14:42:01] 2026-01-09 19:41:12,695 | INFO     | monitor loop #1115: job 0:6963168784 is in state 'finished'
[2026-01-09 14:42:01] 2026-01-09 19:41:12,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:42:01] 2026-01-09 19:41:12,990 | INFO     | time since job start (15523s) is within the limit (349056.0s)
[2026-01-09 14:42:01] 2026-01-09 19:41:14,995 | INFO     | time since job start (15525s) is within the limit (349056.0s)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,035 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 14:42:01] 2026-01-09 19:41:15,038 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2500.0416666666665
[2026-01-09 14:42:01] 2026-01-09 19:41:15,041 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963168784/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,041 | INFO     | extracted standard info from prmon json
[2026-01-09 14:42:01] 2026-01-09 19:41:15,041 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:42:01] 2026-01-09 19:41:15,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:42:01] 2026-01-09 19:41:15,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:42:01] 2026-01-09 19:41:15,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:42:01] 2026-01-09 19:41:15,045 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:42:01] 2026-01-09 19:41:15,046 | INFO     | sum of square deviations: 5081276667.5
[2026-01-09 14:42:01] 2026-01-09 19:41:15,047 | INFO     | sum of deviations: -29152803867.49997
[2026-01-09 14:42:01] 2026-01-09 19:41:15,047 | INFO     | mean x: 1767979891.5
[2026-01-09 14:42:01] 2026-01-09 19:41:15,048 | INFO     | mean y: 2524750.7992125982
[2026-01-09 14:42:01] 2026-01-09 19:41:15,048 | INFO     | intersect: 10145954127.169296
[2026-01-09 14:42:01] 2026-01-09 19:41:15,048 | INFO     | chi2: 1.6725965816302222
[2026-01-09 14:42:01] 2026-01-09 19:41:15,048 | INFO     | sum of square deviations: 4787066500.0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,050 | INFO     | sum of deviations: -28286207763.999985
[2026-01-09 14:42:01] 2026-01-09 19:41:15,050 | INFO     | mean x: 1767979739.0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,050 | INFO     | mean y: 2525200.0200803215
[2026-01-09 14:42:01] 2026-01-09 19:41:15,050 | INFO     | intersect: 10449307633.457441
[2026-01-09 14:42:01] 2026-01-09 19:41:15,050 | INFO     | chi2: 1.6711765612758833
[2026-01-09 14:42:01] 2026-01-09 19:41:15,051 | INFO     | current chi2=1.6711765612758833 (change=0.08489915440068717 %)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,051 | INFO     | right removable region: 248
[2026-01-09 14:42:01] 2026-01-09 19:41:15,051 | INFO     | sum of square deviations: 4787066500.0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,052 | INFO     | sum of deviations: -66457285517.00001
[2026-01-09 14:42:01] 2026-01-09 19:41:15,052 | INFO     | mean x: 1767980044.0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,053 | INFO     | mean y: 2543908.184738956
[2026-01-09 14:42:01] 2026-01-09 19:41:15,053 | INFO     | intersect: 24546835192.307537
[2026-01-09 14:42:01] 2026-01-09 19:41:15,053 | INFO     | chi2: 0.2683251660651489
[2026-01-09 14:42:01] 2026-01-09 19:41:15,053 | INFO     | current chi2=0.2683251660651489 (change=83.95756818995639 %)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,053 | INFO     | sum of square deviations: 4504437945.0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,055 | INFO     | sum of deviations: -67956094526.50001
[2026-01-09 14:42:01] 2026-01-09 19:41:15,055 | INFO     | mean x: 1767980196.5
[2026-01-09 14:42:01] 2026-01-09 19:41:15,055 | INFO     | mean y: 2544692.225409836
[2026-01-09 14:42:01] 2026-01-09 19:41:15,055 | INFO     | intersect: 26675135328.68806
[2026-01-09 14:42:01] 2026-01-09 19:41:15,055 | INFO     | chi2: 0.24227204635388866
[2026-01-09 14:42:01] 2026-01-09 19:41:15,056 | INFO     | current chi2=0.24227204635388866 (change=9.709532688758154 %)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,056 | INFO     | left removable region: 20
[2026-01-09 14:42:01] 2026-01-09 19:41:15,056 | INFO     | sum of square deviations: 3675146117.0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,057 | INFO     | sum of deviations: -52378915841.5
[2026-01-09 14:42:01] 2026-01-09 19:41:15,057 | INFO     | mean x: 1767980318.5
[2026-01-09 14:42:01] 2026-01-09 19:41:15,057 | INFO     | mean y: 2537468.9078947366
[2026-01-09 14:42:01] 2026-01-09 19:41:15,058 | INFO     | intersect: 25200145771.82149
[2026-01-09 14:42:01] 2026-01-09 19:41:15,058 | INFO     | chi2: 0.2270813789238126
[2026-01-09 14:42:01] 2026-01-09 19:41:15,058 | INFO     | current memory leak: -14.25 B/s (using 228 data points, chi2=0.23)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,058 | INFO     | could have reported an average CPU frequency of 2586 MHz (12 samples)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | ..............................
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | . Timing measurements:
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | . get job = 0 s
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | . initial setup = 2 s
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | . payload setup = 5 s
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | . stage-in = 0 s
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | . payload execution = 15491 s
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | . stage-out = 2 s
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | . log creation = 0 s
[2026-01-09 14:42:01] 2026-01-09 19:41:15,059 | INFO     | ..............................
[2026-01-09 14:42:01] 2026-01-09 19:41:15,199 | INFO     | 
[2026-01-09 14:42:01] 2026-01-09 19:41:15,199 | INFO     | job summary report
[2026-01-09 14:42:01] 2026-01-09 19:41:15,199 | INFO     | --------------------------------------------------
[2026-01-09 14:42:01] 2026-01-09 19:41:15,199 | INFO     | PanDA job id: 6963168784
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | task id: 47898826
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | errors: (none)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | pilot state: finished 
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | transexitcode: 0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | exeerrorcode: 0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | exeerrordiag: 
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | exitcode: 0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | exitmsg: OK
[2026-01-09 14:42:01] 2026-01-09 19:41:15,200 | INFO     | cpuconsumptiontime: 117093 s
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | nevents: 400
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | neventsw: 0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | pid: 23701
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | pgrp: 23701
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | corecount: 8
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | event service: False
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | sizes: {0: 2283800, 1: 2283999, 4: 2284261, 12: 2284289, 15501: 2315330, 15503: 2324328, 15504: 2324512, 15510: 2324706}
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | --------------------------------------------------
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | 
[2026-01-09 14:42:01] 2026-01-09 19:41:15,201 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 14:42:01] 2026-01-09 19:41:15,216 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,217 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,217 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,217 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,219 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,220 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:42:01] 2026-01-09 19:41:15,220 | INFO     | job 6963168784 has completed (purged errors)
[2026-01-09 14:42:01] 2026-01-09 19:41:15,220 | INFO     | overall cleanup function is called
[2026-01-09 14:42:01] 2026-01-09 19:41:16,230 | INFO     | --- collectZombieJob: --- 10, [23701]
[2026-01-09 14:42:01] 2026-01-09 19:41:16,230 | INFO     | zombie collector waiting for pid 23701
[2026-01-09 14:42:01] 2026-01-09 19:41:16,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:42:01] 2026-01-09 19:41:16,230 | INFO     | collected zombie processes
[2026-01-09 14:42:01] 2026-01-09 19:41:16,230 | INFO     | will attempt to kill all subprocesses of pid=23701
[2026-01-09 14:42:01] 2026-01-09 19:41:16,414 | INFO     | process IDs to be killed: [23701] (in reverse order)
[2026-01-09 14:42:01] 2026-01-09 19:41:16,459 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:42:01] 2026-01-09 19:41:16,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:42:01] 2026-01-09 19:41:16,463 | INFO     | did not find any defunct processes belonging to 23701
[2026-01-09 14:42:01] 2026-01-09 19:41:16,465 | INFO     | did not find any defunct processes belonging to 23701
[2026-01-09 14:42:01] 2026-01-09 19:41:16,465 | INFO     | ready for new job
[2026-01-09 14:42:01] 2026-01-09 19:41:16,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:42:01] 2026-01-09 19:41:16,467 | INFO     | ***************************************
[2026-01-09 14:42:01] 2026-01-09 19:41:16,467 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:42:01] 2026-01-09 19:41:16,467 | INFO     | ***************************************
[2026-01-09 14:42:01] 2026-01-09 19:41:16,467 | INFO     | 
[2026-01-09 14:42:01] 2026-01-09 19:41:16,468 | INFO     | architecture information:
[2026-01-09 14:42:01] 2026-01-09 19:41:16,468 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:42:01] 2026-01-09 19:41:16,478 | INFO     | cat /etc/os-release:
[2026-01-09 14:42:01] NAME="CentOS Linux"
[2026-01-09 14:42:01] VERSION="7 (Core)"
[2026-01-09 14:42:01] ID="centos"
[2026-01-09 14:42:01] ID_LIKE="rhel fedora"
[2026-01-09 14:42:01] VERSION_ID="7"
[2026-01-09 14:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:42:01] ANSI_COLOR="0;31"
[2026-01-09 14:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:42:01] HOME_URL="https://www.centos.org/"
[2026-01-09 14:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:42:01] 
[2026-01-09 14:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:42:01] 
[2026-01-09 14:42:01] 2026-01-09 19:41:16,478 | INFO     | ***************************************
[2026-01-09 14:42:01] 2026-01-09 19:41:16,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 14:42:01] 2026-01-09 19:41:16,998 | INFO     | sufficient remaining disk space (27722252288 B)
[2026-01-09 14:42:01] 2026-01-09 19:41:16,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:42:01] 2026-01-09 19:41:16,998 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:42:01] 2026-01-09 19:41:16,998 | INFO     | update_server=False
[2026-01-09 14:42:01] 2026-01-09 19:41:16,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:42:01] 2026-01-09 19:41:16,999 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 14:42:01] 2026-01-09 19:41:16,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:42:01] 2026-01-09 19:41:16,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:42:01] 2026-01-09 19:41:16,999 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:42:01] 2026-01-09 19:41:17,000 | INFO     | aborting loop
[2026-01-09 14:42:01] 2026-01-09 19:41:17,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:42:01] 2026-01-09 19:41:17,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:42:01] 2026-01-09 19:41:17,074 | INFO     | all job control threads have been joined
[2026-01-09 14:42:01] 2026-01-09 19:41:17,589 | INFO     | all data control threads have been joined
[2026-01-09 14:42:01] 2026-01-09 19:41:18,004 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,005 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,006 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,079 | INFO     | [job] control thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,160 | INFO     | all payload control threads have been joined
[2026-01-09 14:42:01] 2026-01-09 19:41:18,286 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,288 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,444 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:42:01] 2026-01-09 19:41:18,509 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,594 | INFO     | [data] control thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:18,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:19,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:42:01] 2026-01-09 19:41:19,165 | INFO     | [payload] control thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:19,295 | INFO     | [job] validate thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:19,397 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:19,579 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:20,503 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:23,131 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:42:01] 2026-01-09 19:41:54,937 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:42:01] 2026-01-09 19:41:55,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597679404864)>', '<ExcThread(monitor, started 140597021107968)>']
[2026-01-09 14:42:01] 2026-01-09 19:41:56,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:42:01] 2026-01-09 19:41:56,193 | INFO     | [monitor] control thread has ended
[2026-01-09 14:42:01] 2026-01-09 19:42:00,784 | INFO     | all workflow threads have been joined
[2026-01-09 14:42:01] 2026-01-09 19:42:00,784 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:42:01] 2026-01-09 19:42:00,785 | INFO     | traces error code: 0
[2026-01-09 14:42:01] 2026-01-09 19:42:00,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:42:01] 2026-01-09 19:42:00,915 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:42:01] 2026-01-09 19:42:00,918 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:42:01] 2026-01-09 19:42:00,920 [wrapper] pilotpid: 17159
[2026-01-09 14:42:01] 2026-01-09 19:42:00,923 [wrapper] Pilot exit status: 0
[2026-01-09 14:42:01] 2026-01-09 19:42:00,932 [wrapper] pandaids: 6963168784
[2026-01-09 14:42:01] 2026-01-09 19:42:00,962 [wrapper] cleanup supervisor_pilot 17297 17160
[2026-01-09 14:42:01] 2026-01-09 19:42:00,964 [wrapper] Test setup, not cleaning
[2026-01-09 14:42:01] 2026-01-09 19:42:00,967 [wrapper] apfmon messages muted
[2026-01-09 14:42:01] 2026-01-09 19:42:00,969 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:42:01] 2026-01-09 19:42:00,972 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:42:01]  *** Error codes and diagnostics ***
[2026-01-09 14:42:01]     "exeErrorCode": 0,
[2026-01-09 14:42:01]     "exeErrorDiag": "",
[2026-01-09 14:42:01]     "pilotErrorCode": 0,
[2026-01-09 14:42:01]     "pilotErrorDiag": "",
[2026-01-09 14:42:01]  *** Listing of results directory ***
[2026-01-09 14:42:01] total 437092
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 14:42:01] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas       100 Jan  9 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:42:01] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 10:22 run_atlas
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas       105 Jan  9 10:22 job.xml
[2026-01-09 14:42:01] -rw-r--r-- 2 boincer umatlas 223708105 Jan  9 10:22 EVNT.47898824._001391.pool.root.1
[2026-01-09 14:42:01] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:22 start_atlas.sh
[2026-01-09 14:42:01] drwxrwx--x 2 boincer umatlas      4096 Jan  9 10:22 shared
[2026-01-09 14:42:01] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 10:22 input.tar.gz
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas         0 Jan  9 10:22 boinc_lockfile
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 10:22 pandaJob.out
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas        57 Jan  9 10:22 setup.sh.local
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas    989377 Jan  9 10:22 agis_schedconf.cvmfs.json
[2026-01-09 14:42:01] drwx------ 5 boincer umatlas      4096 Jan  9 10:22 pilot3
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 14:37 init_data.xml
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas 214683313 Jan  9 14:40 HITS.47898826._036311.pool.root.1
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas        95 Jan  9 14:40 pilot_heartbeat.json
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas       531 Jan  9 14:41 boinc_task_state.xml
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas      1054 Jan  9 14:41 memory_monitor_summary.json
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas   1516240 Jan  9 14:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas    482673 Jan  9 14:41 log.47898826._036311.job.log.tgz.1
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas      7867 Jan  9 14:41 heartbeat.json
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 14:42 boinc_mmap_file
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas        29 Jan  9 14:42 wrapper_checkpoint.txt
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas      4552 Jan  9 14:42 pilotlog.txt
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas   2155441 Jan  9 14:42 log.47898826._036311.job.log.1
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas       357 Jan  9 14:42 output.list
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas       620 Jan  9 14:42 runtime_log
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas   2652160 Jan  9 14:42 result.tar.gz
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas       663 Jan  9 14:42 XeTNDmC0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOegKDmwdcBrn.diag
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 14:42 runtime_log.err
[2026-01-09 14:42:01] -rw-r--r-- 1 boincer umatlas     21279 Jan  9 14:42 stderr.txt
[2026-01-09 14:42:01] HITS file was successfully produced:
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas 214683313 Jan  9 14:40 shared/HITS.pool.root.1
[2026-01-09 14:42:01]  *** Contents of shared directory: ***
[2026-01-09 14:42:01] total 431316
[2026-01-09 14:42:01] -rw-r--r-- 2 boincer umatlas 223708105 Jan  9 10:22 ATLAS.root_0
[2026-01-09 14:42:01] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 10:22 start_atlas.sh
[2026-01-09 14:42:01] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 10:22 input.tar.gz
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas 214683313 Jan  9 14:40 HITS.pool.root.1
[2026-01-09 14:42:01] -rw------- 1 boincer umatlas   2652160 Jan  9 14:42 result.tar.gz
14:42:02 (13493): run_atlas exited; CPU time 117296.464693
14:42:02 (13493): called boinc_finish(0)

</stderr_txt>
]]>

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