Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:31:47 (3227546): wrapper (7.7.26015): starting
13:31:47 (3227546): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:31:47] Arguments: --nthreads 8
[2026-01-09 13:31:47] Threads: 8
[2026-01-09 13:31:47] Checking for CVMFS
[2026-01-09 13:31:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:31:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:31:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:31:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:31:49] 2.13.3.0 11379 93774 338244 154952 1 274 30204903 32935936 14229 16776704 0 327083517 99.394 527994866 39708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 13:31:49] CVMFS is ok
[2026-01-09 13:31:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:31:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:31:49] Further information can be found at the LHC@home message board.
[2026-01-09 13:31:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:31:49] Checking for apptainer binary...
[2026-01-09 13:31:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:31:49] Running /usr/bin/apptainer --version
[2026-01-09 13:31:49] apptainer version 1.4.5-2.el9
[2026-01-09 13:31:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:31:50] c6-4-5-1.aglt2.org
[2026-01-09 13:31:50] apptainer works
[2026-01-09 13:31:50] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:31:50] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:31:51] Starting ATLAS job with PandaID=6963168783
[2026-01-09 13:31:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 02:35:39]  *** The last 200 lines of the pilot log: ***
[2026-01-10 02:35:39] 2026-01-10 07:34:41,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 02:35:39] 2026-01-10 07:34:41,787 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 02:35:39] 2026-01-10 07:34:41,835 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2969.044515625
[2026-01-10 02:35:39] 2026-01-10 07:34:41,932 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963168783/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 02:35:39] 2026-01-10 07:34:41,933 | INFO     | extracted standard info from prmon json
[2026-01-10 02:35:39] 2026-01-10 07:34:41,933 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 02:35:39] 2026-01-10 07:34:41,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 02:35:39] 2026-01-10 07:34:41,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 02:35:39] 2026-01-10 07:34:41,948 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 02:35:39] 2026-01-10 07:34:42,064 | INFO     | fitting pss+swap vs Time
[2026-01-10 02:35:39] 2026-01-10 07:34:42,083 | INFO     | sum of square deviations: 139373110357.51956
[2026-01-10 02:35:39] 2026-01-10 07:34:42,188 | INFO     | sum of deviations: 210629846967.81955
[2026-01-10 02:35:39] 2026-01-10 07:34:42,220 | INFO     | mean x: 1768007081.2715404
[2026-01-10 02:35:39] 2026-01-10 07:34:42,220 | INFO     | mean y: 2493329.1018276764
[2026-01-10 02:35:39] 2026-01-10 07:34:42,220 | INFO     | intersect: -2669435710.9474254
[2026-01-10 02:35:39] 2026-01-10 07:34:42,221 | INFO     | chi2: 6.561566399769526
[2026-01-10 02:35:39] 2026-01-10 07:34:42,222 | INFO     | sum of square deviations: 136661918842.0236
[2026-01-10 02:35:39] 2026-01-10 07:34:42,330 | INFO     | sum of deviations: 451112794576.4925
[2026-01-10 02:35:39] 2026-01-10 07:34:42,331 | INFO     | mean x: 1768006928.7766097
[2026-01-10 02:35:39] 2026-01-10 07:34:42,331 | INFO     | mean y: 2506855.679369251
[2026-01-10 02:35:39] 2026-01-10 07:34:42,331 | INFO     | intersect: -5833577938.307622
[2026-01-10 02:35:39] 2026-01-10 07:34:42,355 | INFO     | chi2: 3.1018819465081355
[2026-01-10 02:35:39] 2026-01-10 07:34:42,355 | INFO     | current chi2=3.1018819465081355 (change=52.72650221725884 %)
[2026-01-10 02:35:39] 2026-01-10 07:34:42,356 | INFO     | sum of square deviations: 133985983955.66689
[2026-01-10 02:35:39] 2026-01-10 07:34:42,462 | INFO     | sum of deviations: 443715809367.33344
[2026-01-10 02:35:39] 2026-01-10 07:34:42,467 | INFO     | mean x: 1768006776.2777777
[2026-01-10 02:35:39] 2026-01-10 07:34:42,467 | INFO     | mean y: 2506434.912698413
[2026-01-10 02:35:39] 2026-01-10 07:34:42,467 | INFO     | intersect: -5852528058.565336
[2026-01-10 02:35:39] 2026-01-10 07:34:42,468 | INFO     | chi2: 3.1005972194199463
[2026-01-10 02:35:39] 2026-01-10 07:34:42,468 | INFO     | current chi2=3.1005972194199463 (change=0.041417665480000726 %)
[2026-01-10 02:35:39] 2026-01-10 07:34:42,468 | INFO     | right removable region: 755
[2026-01-10 02:35:39] 2026-01-10 07:34:42,471 | INFO     | sum of square deviations: 136661558332.02362
[2026-01-10 02:35:39] 2026-01-10 07:34:42,571 | INFO     | sum of deviations: 6691862144.2300415
[2026-01-10 02:35:39] 2026-01-10 07:34:42,571 | INFO     | mean x: 1768007233.7766097
[2026-01-10 02:35:39] 2026-01-10 07:34:42,571 | INFO     | mean y: 2504787.3837056505
[2026-01-10 02:35:39] 2026-01-10 07:34:42,571 | INFO     | intersect: -84068648.64934574
[2026-01-10 02:35:39] 2026-01-10 07:34:42,572 | INFO     | chi2: 3.927276475545605
[2026-01-10 02:35:39] 2026-01-10 07:34:42,572 | INFO     | current chi2=3.927276475545605 (change=40.14727221714086 %)
[2026-01-10 02:35:39] 2026-01-10 07:34:42,586 | INFO     | sum of square deviations: 133985402318.98802
[2026-01-10 02:35:39] 2026-01-10 07:34:42,653 | INFO     | sum of deviations: -46393112825.09545
[2026-01-10 02:35:39] 2026-01-10 07:34:42,653 | INFO     | mean x: 1768007386.2817461
[2026-01-10 02:35:39] 2026-01-10 07:34:42,653 | INFO     | mean y: 2507811.9206349207
[2026-01-10 02:35:39] 2026-01-10 07:34:42,653 | INFO     | intersect: 614689174.4252803
[2026-01-10 02:35:39] 2026-01-10 07:34:42,667 | INFO     | chi2: 3.7506425614793484
[2026-01-10 02:35:39] 2026-01-10 07:34:42,667 | INFO     | current chi2=3.7506425614793484 (change=4.497618519249208 %)
[2026-01-10 02:35:39] 2026-01-10 07:34:42,668 | INFO     | left removable region: 20
[2026-01-10 02:35:39] 2026-01-10 07:34:42,668 | INFO     | sum of square deviations: 123127571034.79472
[2026-01-10 02:35:39] 2026-01-10 07:34:42,715 | INFO     | sum of deviations: 109880518104.03394
[2026-01-10 02:35:39] 2026-01-10 07:34:42,715 | INFO     | mean x: 1768007355.797279
[2026-01-10 02:35:39] 2026-01-10 07:34:42,716 | INFO     | mean y: 2525820.517006803
[2026-01-10 02:35:39] 2026-01-10 07:34:42,716 | INFO     | intersect: -1575265105.0576499
[2026-01-10 02:35:39] 2026-01-10 07:34:42,717 | INFO     | chi2: 0.05595556642985535
[2026-01-10 02:35:39] 2026-01-10 07:34:42,717 | INFO     | current memory leak: 0.89 B/s (using 735 data points, chi2=0.06)
[2026-01-10 02:35:39] 2026-01-10 07:34:42,718 | INFO     | could have reported an average CPU frequency of 2989 MHz (29 samples)
[2026-01-10 02:35:39] 2026-01-10 07:34:42,718 | INFO     | ..............................
[2026-01-10 02:35:39] 2026-01-10 07:34:42,718 | INFO     | . Timing measurements:
[2026-01-10 02:35:39] 2026-01-10 07:34:42,738 | INFO     | . get job = 0 s
[2026-01-10 02:35:39] 2026-01-10 07:34:42,739 | INFO     | . initial setup = 5 s
[2026-01-10 02:35:39] 2026-01-10 07:34:42,739 | INFO     | . payload setup = 50 s
[2026-01-10 02:35:39] 2026-01-10 07:34:42,739 | INFO     | . stage-in = 0 s
[2026-01-10 02:35:39] 2026-01-10 07:34:42,739 | INFO     | . payload execution = 46716 s
[2026-01-10 02:35:39] 2026-01-10 07:34:42,739 | INFO     | . stage-out = 10 s
[2026-01-10 02:35:39] 2026-01-10 07:34:42,739 | INFO     | . log creation = 2 s
[2026-01-10 02:35:39] 2026-01-10 07:34:42,739 | INFO     | ..............................
[2026-01-10 02:35:39] 2026-01-10 07:34:42,932 | INFO     | time since job start (46899s) is within the limit (349056.0s)
[2026-01-10 02:35:39] 2026-01-10 07:34:43,533 | INFO     | 
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | job summary report
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | --------------------------------------------------
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | PanDA job id: 6963168783
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | task id: 47898826
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | errors: (none)
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | pilot state: finished 
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | transexitcode: 0
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | exeerrorcode: 0
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | exeerrordiag: 
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | exitcode: 0
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | exitmsg: OK
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | cpuconsumptiontime: 54154 s
[2026-01-10 02:35:39] 2026-01-10 07:34:43,534 | INFO     | nevents: 400
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | neventsw: 0
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | pid: 3252289
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | pgrp: 3252289
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | corecount: 8
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | event service: False
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | sizes: {0: 2283142, 1: 2283998, 2: 2284026, 13: 2284026, 24: 2284082, 36: 2284110, 39: 2284528, 47: 2284556, 46773: 2329786, 46774: 2329785, 46786: 2338839, 46787:
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | --------------------------------------------------
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | 
[2026-01-10 02:35:39] 2026-01-10 07:34:43,535 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 02:35:39] 2026-01-10 07:34:43,738 | INFO     | job 6963168783 has completed (purged errors)
[2026-01-10 02:35:39] 2026-01-10 07:34:43,739 | INFO     | overall cleanup function is called
[2026-01-10 02:35:39] 2026-01-10 07:34:44,778 | INFO     | --- collectZombieJob: --- 10, [3252289]
[2026-01-10 02:35:39] 2026-01-10 07:34:44,779 | INFO     | zombie collector waiting for pid 3252289
[2026-01-10 02:35:39] 2026-01-10 07:34:44,779 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 02:35:39] 2026-01-10 07:34:44,779 | INFO     | collected zombie processes
[2026-01-10 02:35:39] 2026-01-10 07:34:44,779 | INFO     | will attempt to kill all subprocesses of pid=3252289
[2026-01-10 02:35:39] 2026-01-10 07:34:49,396 | INFO     | process IDs to be killed: [3252289] (in reverse order)
[2026-01-10 02:35:39] 2026-01-10 07:34:50,567 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 02:35:39] 2026-01-10 07:34:50,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 02:35:39] 2026-01-10 07:34:50,733 | INFO     | did not find any defunct processes belonging to 3252289
[2026-01-10 02:35:39] 2026-01-10 07:34:50,842 | INFO     | did not find any defunct processes belonging to 3252289
[2026-01-10 02:35:39] 2026-01-10 07:34:50,842 | INFO     | ready for new job
[2026-01-10 02:35:39] 2026-01-10 07:34:50,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 02:35:39] 2026-01-10 07:34:50,877 | INFO     | ***************************************
[2026-01-10 02:35:39] 2026-01-10 07:34:50,877 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 02:35:39] 2026-01-10 07:34:50,877 | INFO     | ***************************************
[2026-01-10 02:35:39] 2026-01-10 07:34:50,877 | INFO     | 
[2026-01-10 02:35:39] 2026-01-10 07:34:50,913 | INFO     | architecture information:
[2026-01-10 02:35:39] 2026-01-10 07:34:50,938 | INFO     | executing command: cat /etc/os-release
[2026-01-10 02:35:39] 2026-01-10 07:34:51,065 | INFO     | cat /etc/os-release:
[2026-01-10 02:35:39] NAME="CentOS Linux"
[2026-01-10 02:35:39] VERSION="7 (Core)"
[2026-01-10 02:35:39] ID="centos"
[2026-01-10 02:35:39] ID_LIKE="rhel fedora"
[2026-01-10 02:35:39] VERSION_ID="7"
[2026-01-10 02:35:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 02:35:39] ANSI_COLOR="0;31"
[2026-01-10 02:35:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 02:35:39] HOME_URL="https://www.centos.org/"
[2026-01-10 02:35:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 02:35:39] 
[2026-01-10 02:35:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 02:35:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 02:35:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 02:35:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 02:35:39] 
[2026-01-10 02:35:39] 2026-01-10 07:34:51,065 | INFO     | ***************************************
[2026-01-10 02:35:39] 2026-01-10 07:34:51,568 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 02:35:39] 2026-01-10 07:34:51,741 | INFO     | sufficient remaining disk space (74258055168 B)
[2026-01-10 02:35:39] 2026-01-10 07:34:51,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 02:35:39] 2026-01-10 07:34:51,741 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 02:35:39] 2026-01-10 07:34:51,741 | INFO     | update_server=False
[2026-01-10 02:35:39] 2026-01-10 07:34:51,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 02:35:39] 2026-01-10 07:34:51,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 02:35:39] 2026-01-10 07:34:51,908 | INFO     | all payload control threads have been joined
[2026-01-10 02:35:39] 2026-01-10 07:34:52,049 | INFO     | all data control threads have been joined
[2026-01-10 02:35:39] 2026-01-10 07:34:52,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:35:39] 2026-01-10 07:34:52,643 | INFO     | aborting loop
[2026-01-10 02:35:39] 2026-01-10 07:34:52,754 | INFO     | [job] retrieve thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:52,793 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:52,914 | INFO     | [payload] control thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:52,926 | INFO     | all job control threads have been joined
[2026-01-10 02:35:39] 2026-01-10 07:34:52,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:35:39] 2026-01-10 07:34:53,010 | INFO     | [payload] validate_post thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,022 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,028 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,033 | INFO     | [payload] failed_post thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,071 | INFO     | [data] control thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 02:35:39] 2026-01-10 07:34:53,520 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,528 | INFO     | [job] validate thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,648 | INFO     | [job] job monitor thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,788 | INFO     | [data] copytool_out thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,816 | INFO     | [data] copytool_in thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,932 | INFO     | [job] control thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:53,994 | INFO     | [job] queue monitor thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:34:57,304 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 02:35:39] 2026-01-10 07:35:19,682 | INFO     | PID=3233029 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 02:35:39] 2026-01-10 07:35:19,682 | INFO     | .. there are 17 such processes running
[2026-01-10 02:35:39] 2026-01-10 07:35:19,683 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 02:35:39] 2026-01-10 07:35:19,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 02:35:39] 2026-01-10 07:35:19,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 02:35:39] 2026-01-10 07:35:31,561 | INFO     | [monitor] cgroup control has ended
[2026-01-10 02:35:39] 2026-01-10 07:35:32,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548602386240)>', '<ExcThread(monitor, started 140547805132544)>']
[2026-01-10 02:35:39] 2026-01-10 07:35:32,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 02:35:39] 2026-01-10 07:35:32,778 | INFO     | [monitor] control thread has ended
[2026-01-10 02:35:39] 2026-01-10 07:35:37,663 | INFO     | all workflow threads have been joined
[2026-01-10 02:35:39] 2026-01-10 07:35:37,664 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 02:35:39] 2026-01-10 07:35:37,664 | INFO     | traces error code: 0
[2026-01-10 02:35:39] 2026-01-10 07:35:37,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 02:35:39] 2026-01-10 07:35:38,897 [wrapper] ==== pilot stdout END ====
[2026-01-10 02:35:39] 2026-01-10 07:35:38,925 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 02:35:39] 2026-01-10 07:35:38,956 [wrapper] pilotpid: 3233029
[2026-01-10 02:35:39] 2026-01-10 07:35:39,014 [wrapper] Pilot exit status: 0
[2026-01-10 02:35:39] 2026-01-10 07:35:39,107 [wrapper] pandaids: 6963168783
[2026-01-10 02:35:39] 2026-01-10 07:35:39,202 [wrapper] cleanup supervisor_pilot 1566243 3233030
[2026-01-10 02:35:39] 2026-01-10 07:35:39,205 [wrapper] Test setup, not cleaning
[2026-01-10 02:35:39] 2026-01-10 07:35:39,208 [wrapper] apfmon messages muted
[2026-01-10 02:35:39] 2026-01-10 07:35:39,220 [wrapper] ==== wrapper stdout END ====
[2026-01-10 02:35:39] 2026-01-10 07:35:39,235 [wrapper] ==== wrapper stderr END ====
[2026-01-10 02:35:39]  *** Error codes and diagnostics ***
[2026-01-10 02:35:39]     "exeErrorCode": 0,
[2026-01-10 02:35:39]     "exeErrorDiag": "",
[2026-01-10 02:35:39]     "pilotErrorCode": 0,
[2026-01-10 02:35:39]     "pilotErrorDiag": "",
[2026-01-10 02:35:39]  *** Listing of results directory ***
[2026-01-10 02:35:39] total 445764
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-10 02:35:39] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas       100 Jan  9 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 02:35:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 13:31 run_atlas
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas       105 Jan  9 13:31 job.xml
[2026-01-10 02:35:39] -rw-r--r--. 2 boincer umatlas 223708105 Jan  9 13:31 EVNT.47898824._001391.pool.root.1
[2026-01-10 02:35:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:31 start_atlas.sh
[2026-01-10 02:35:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 13:31 shared
[2026-01-10 02:35:39] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 13:31 input.tar.gz
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas         0 Jan  9 13:31 boinc_lockfile
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 13:31 pandaJob.out
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas        57 Jan  9 13:31 setup.sh.local
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas    989372 Jan  9 13:32 agis_schedconf.cvmfs.json
[2026-01-10 02:35:39] drwx------. 5 boincer umatlas      4096 Jan  9 13:33 pilot3
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas 215792591 Jan 10 02:28 HITS.47898826._036310.pool.root.1
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas       531 Jan 10 02:28 boinc_task_state.xml
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas      6874 Jan 10 02:31 init_data.xml
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas      1040 Jan 10 02:33 memory_monitor_summary.json
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas   1516240 Jan 10 02:34 agis_ddmendpoints.agis.ALL.json
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas    858812 Jan 10 02:34 log.47898826._036310.job.log.tgz.1
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas      7824 Jan 10 02:34 heartbeat.json
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas        95 Jan 10 02:35 pilot_heartbeat.json
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 02:35 boinc_mmap_file
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas        28 Jan 10 02:35 wrapper_checkpoint.txt
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas      4824 Jan 10 02:35 pilotlog.txt
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas   5663185 Jan 10 02:35 log.47898826._036310.job.log.1
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas       357 Jan 10 02:35 output.list
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas       620 Jan 10 02:35 runtime_log
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas   6543360 Jan 10 02:35 result.tar.gz
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 02:35 runtime_log.err
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas       658 Jan 10 02:35 H9RNDmC0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNegKDm0G4e0m.diag
[2026-01-10 02:35:39] -rw-r--r--. 1 boincer umatlas     21250 Jan 10 02:35 stderr.txt
[2026-01-10 02:35:39] HITS file was successfully produced:
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas 215792591 Jan 10 02:28 shared/HITS.pool.root.1
[2026-01-10 02:35:39]  *** Contents of shared directory: ***
[2026-01-10 02:35:39] total 436196
[2026-01-10 02:35:39] -rw-r--r--. 2 boincer umatlas 223708105 Jan  9 13:31 ATLAS.root_0
[2026-01-10 02:35:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 13:31 start_atlas.sh
[2026-01-10 02:35:39] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 13:31 input.tar.gz
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas 215792591 Jan 10 02:28 HITS.pool.root.1
[2026-01-10 02:35:39] -rw-------. 1 boincer umatlas   6543360 Jan 10 02:35 result.tar.gz
02:35:41 (3227546): run_atlas exited; CPU time 55631.277621
02:35:41 (3227546): called boinc_finish(0)

</stderr_txt>
]]>

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