Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:00:46 (3534183): wrapper (7.7.26015): starting
11:00:46 (3534183): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:00:46] Arguments: --nthreads 8
[2026-01-09 11:00:46] Threads: 8
[2026-01-09 11:00:46] Checking for CVMFS
[2026-01-09 11:00:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:00:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:00:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:00:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:00:47] 2.13.3.0 2033223 17115 196164 154948 3 342 29619282 40960001 26527 16776704 0 68149025 99.622 72637070 36218 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:00:47] CVMFS is ok
[2026-01-09 11:00:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:00:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:00:47] Further information can be found at the LHC@home message board.
[2026-01-09 11:00:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:00:47] Checking for apptainer binary...
[2026-01-09 11:00:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:00:47] Running /usr/bin/apptainer --version
[2026-01-09 11:00:47] apptainer version 1.4.5-2.el9
[2026-01-09 11:00:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:00:48] c-212-17.aglt2.org
[2026-01-09 11:00:48] apptainer works
[2026-01-09 11:00:48] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:00:48] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:00:48] Starting ATLAS job with PandaID=6963167866
[2026-01-09 11:00:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:26:45]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:26:45] 2026-01-09 19:25:40,411 | INFO     | chi2: 2.0438133055764838
[2026-01-09 14:26:45] 2026-01-09 19:25:40,411 | INFO     | sum of square deviations: 2299143446.5846267
[2026-01-09 14:26:45] 2026-01-09 19:25:40,412 | INFO     | sum of deviations: 33246865341.7077
[2026-01-09 14:26:45] 2026-01-09 19:25:40,412 | INFO     | mean x: 1767980454.0461538
[2026-01-09 14:26:45] 2026-01-09 19:25:40,412 | INFO     | mean y: 2480601.476923077
[2026-01-09 14:26:45] 2026-01-09 19:25:40,412 | INFO     | intersect: -25563478829.963078
[2026-01-09 14:26:45] 2026-01-09 19:25:40,413 | INFO     | chi2: 2.0457043569614237
[2026-01-09 14:26:45] 2026-01-09 19:25:40,413 | INFO     | current chi2=2.0457043569614237 (change=-0.0925256421308281 %)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,413 | INFO     | right removable region: 194
[2026-01-09 14:26:45] 2026-01-09 19:25:40,413 | INFO     | sum of square deviations: 2299137956.5846267
[2026-01-09 14:26:45] 2026-01-09 19:25:40,414 | INFO     | sum of deviations: -4137859359.6153846
[2026-01-09 14:26:45] 2026-01-09 19:25:40,414 | INFO     | mean x: 1767980759.0461538
[2026-01-09 14:26:45] 2026-01-09 19:25:40,414 | INFO     | mean y: 2513313.512820513
[2026-01-09 14:26:45] 2026-01-09 19:25:40,414 | INFO     | intersect: 3184425782.2654386
[2026-01-09 14:26:45] 2026-01-09 19:25:40,414 | INFO     | chi2: 0.09444055431206687
[2026-01-09 14:26:45] 2026-01-09 19:25:40,414 | INFO     | current chi2=0.09444055431206687 (change=95.37919857677859 %)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,415 | INFO     | sum of square deviations: 2126769189.0736806
[2026-01-09 14:26:45] 2026-01-09 19:25:40,415 | INFO     | sum of deviations: 348519163.47368443
[2026-01-09 14:26:45] 2026-01-09 19:25:40,415 | INFO     | mean x: 1767980911.5473685
[2026-01-09 14:26:45] 2026-01-09 19:25:40,415 | INFO     | mean y: 2509294.947368421
[2026-01-09 14:26:45] 2026-01-09 19:25:40,415 | INFO     | intersect: -287214306.229263
[2026-01-09 14:26:45] 2026-01-09 19:25:40,416 | INFO     | chi2: 0.061698306425408266
[2026-01-09 14:26:45] 2026-01-09 19:25:40,416 | INFO     | current chi2=0.061698306425408266 (change=34.669690500191244 %)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,416 | INFO     | sum of square deviations: 1963249263.654045
[2026-01-09 14:26:45] 2026-01-09 19:25:40,417 | INFO     | sum of deviations: 6809208668.021619
[2026-01-09 14:26:45] 2026-01-09 19:25:40,417 | INFO     | mean x: 1767981064.0432432
[2026-01-09 14:26:45] 2026-01-09 19:25:40,417 | INFO     | mean y: 2503304.497297297
[2026-01-09 14:26:45] 2026-01-09 19:25:40,417 | INFO     | intersect: -6129449580.4740715
[2026-01-09 14:26:45] 2026-01-09 19:25:40,417 | INFO     | chi2: 0.0020862579704141655
[2026-01-09 14:26:45] 2026-01-09 19:25:40,417 | INFO     | current chi2=0.0020862579704141655 (change=96.61861387891352 %)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,417 | INFO     | sum of square deviations: 1808322988.644441
[2026-01-09 14:26:45] 2026-01-09 19:25:40,418 | INFO     | sum of deviations: 5432481322.066668
[2026-01-09 14:26:45] 2026-01-09 19:25:40,418 | INFO     | mean x: 1767981216.5444446
[2026-01-09 14:26:45] 2026-01-09 19:25:40,418 | INFO     | mean y: 2504659.8666666667
[2026-01-09 14:26:45] 2026-01-09 19:25:40,418 | INFO     | intersect: -5308783753.185122
[2026-01-09 14:26:45] 2026-01-09 19:25:40,418 | INFO     | chi2: 0.0012884303387689212
[2026-01-09 14:26:45] 2026-01-09 19:25:40,419 | INFO     | current chi2=0.0012884303387689212 (change=38.24204115499958 %)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,419 | INFO     | sum of square deviations: 1661768963.6342902
[2026-01-09 14:26:45] 2026-01-09 19:25:40,420 | INFO     | sum of deviations: 4600099944.948571
[2026-01-09 14:26:45] 2026-01-09 19:25:40,420 | INFO     | mean x: 1767981369.0457144
[2026-01-09 14:26:45] 2026-01-09 19:25:40,420 | INFO     | mean y: 2505524.1314285714
[2026-01-09 14:26:45] 2026-01-09 19:25:40,420 | INFO     | intersect: -4891611032.619427
[2026-01-09 14:26:45] 2026-01-09 19:25:40,420 | INFO     | chi2: 0.0010777804704817674
[2026-01-09 14:26:45] 2026-01-09 19:25:40,420 | INFO     | current chi2=0.0010777804704817674 (change=16.349340895560335 %)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,420 | INFO     | left removable region: 50
[2026-01-09 14:26:45] 2026-01-09 19:25:40,420 | INFO     | sum of square deviations: 925862885.8888888
[2026-01-09 14:26:45] 2026-01-09 19:25:40,421 | INFO     | sum of deviations: 1806723033.8611107
[2026-01-09 14:26:45] 2026-01-09 19:25:40,421 | INFO     | mean x: 1767981948.5277777
[2026-01-09 14:26:45] 2026-01-09 19:25:40,421 | INFO     | mean y: 2508709.909722222
[2026-01-09 14:26:45] 2026-01-09 19:25:40,421 | INFO     | intersect: -3447520185.879844
[2026-01-09 14:26:45] 2026-01-09 19:25:40,421 | INFO     | chi2: 0.0006425319903606781
[2026-01-09 14:26:45] 2026-01-09 19:25:40,421 | INFO     | current memory leak: 1.95 B/s (using 144 data points, chi2=0.00)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | could have reported an average CPU frequency of 3234 MHz (10 samples)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | ..............................
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | . Timing measurements:
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | . get job = 0 s
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | . initial setup = 3 s
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | . payload setup = 16 s
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | . stage-in = 0 s
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | . payload execution = 12200 s
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | . stage-out = 2 s
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | . log creation = 0 s
[2026-01-09 14:26:45] 2026-01-09 19:25:40,422 | INFO     | ..............................
[2026-01-09 14:26:45] 2026-01-09 19:25:40,670 | INFO     | 
[2026-01-09 14:26:45] 2026-01-09 19:25:40,684 | INFO     | job summary report
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | --------------------------------------------------
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | PanDA job id: 6963167866
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | task id: 47898826
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | errors: (none)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | pilot state: finished 
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | transexitcode: 0
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | exeerrorcode: 0
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | exeerrordiag: 
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | exitcode: 0
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | exitmsg: OK
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | cpuconsumptiontime: 44145 s
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | nevents: 400
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | neventsw: 0
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | pid: 3559252
[2026-01-09 14:26:45] 2026-01-09 19:25:40,685 | INFO     | pgrp: 3559252
[2026-01-09 14:26:45] 2026-01-09 19:25:40,686 | INFO     | corecount: 8
[2026-01-09 14:26:45] 2026-01-09 19:25:40,686 | INFO     | event service: False
[2026-01-09 14:26:45] 2026-01-09 19:25:40,686 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2284027, 13: 2284027, 14: 2284345, 23: 2284373, 12221: 2314456, 12223: 2323510, 12230: 2323648}
[2026-01-09 14:26:45] 2026-01-09 19:25:40,686 | INFO     | --------------------------------------------------
[2026-01-09 14:26:45] 2026-01-09 19:25:40,686 | INFO     | 
[2026-01-09 14:26:45] 2026-01-09 19:25:40,686 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 14:26:45] 2026-01-09 19:25:40,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,747 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,747 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | job 6963167866 has completed (purged errors)
[2026-01-09 14:26:45] 2026-01-09 19:25:40,748 | INFO     | overall cleanup function is called
[2026-01-09 14:26:45] 2026-01-09 19:25:41,757 | INFO     | --- collectZombieJob: --- 10, [3559252]
[2026-01-09 14:26:45] 2026-01-09 19:25:41,757 | INFO     | zombie collector waiting for pid 3559252
[2026-01-09 14:26:45] 2026-01-09 19:25:41,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:26:45] 2026-01-09 19:25:41,757 | INFO     | collected zombie processes
[2026-01-09 14:26:45] 2026-01-09 19:25:41,757 | INFO     | will attempt to kill all subprocesses of pid=3559252
[2026-01-09 14:26:45] 2026-01-09 19:25:42,424 | INFO     | process IDs to be killed: [3559252] (in reverse order)
[2026-01-09 14:26:45] 2026-01-09 19:25:42,589 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:26:45] 2026-01-09 19:25:42,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:26:45] 2026-01-09 19:25:42,608 | INFO     | did not find any defunct processes belonging to 3559252
[2026-01-09 14:26:45] 2026-01-09 19:25:42,626 | INFO     | did not find any defunct processes belonging to 3559252
[2026-01-09 14:26:45] 2026-01-09 19:25:42,627 | INFO     | ready for new job
[2026-01-09 14:26:45] 2026-01-09 19:25:42,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:26:45] 2026-01-09 19:25:42,629 | INFO     | ***************************************
[2026-01-09 14:26:45] 2026-01-09 19:25:42,629 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:26:45] 2026-01-09 19:25:42,629 | INFO     | ***************************************
[2026-01-09 14:26:45] 2026-01-09 19:25:42,629 | INFO     | 
[2026-01-09 14:26:45] 2026-01-09 19:25:42,634 | INFO     | architecture information:
[2026-01-09 14:26:45] 2026-01-09 19:25:42,634 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:26:45] 2026-01-09 19:25:42,652 | INFO     | cat /etc/os-release:
[2026-01-09 14:26:45] NAME="CentOS Linux"
[2026-01-09 14:26:45] VERSION="7 (Core)"
[2026-01-09 14:26:45] ID="centos"
[2026-01-09 14:26:45] ID_LIKE="rhel fedora"
[2026-01-09 14:26:45] VERSION_ID="7"
[2026-01-09 14:26:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:26:45] ANSI_COLOR="0;31"
[2026-01-09 14:26:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:26:45] HOME_URL="https://www.centos.org/"
[2026-01-09 14:26:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:26:45] 
[2026-01-09 14:26:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:26:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:26:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:26:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:26:45] 
[2026-01-09 14:26:45] 2026-01-09 19:25:42,652 | INFO     | ***************************************
[2026-01-09 14:26:45] 2026-01-09 19:25:43,156 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 14:26:45] 2026-01-09 19:25:43,182 | INFO     | sufficient remaining disk space (127190171648 B)
[2026-01-09 14:26:45] 2026-01-09 19:25:43,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:26:45] 2026-01-09 19:25:43,183 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:26:45] 2026-01-09 19:25:43,183 | INFO     | update_server=False
[2026-01-09 14:26:45] 2026-01-09 19:25:43,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:26:45] 2026-01-09 19:25:43,515 | INFO     | all data control threads have been joined
[2026-01-09 14:26:45] 2026-01-09 19:25:43,649 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:26:45] 2026-01-09 19:25:43,649 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:26:45] 2026-01-09 19:25:43,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:26:45] 2026-01-09 19:25:43,649 | INFO     | will abort loop
[2026-01-09 14:26:45] 2026-01-09 19:25:43,653 | INFO     | all job control threads have been joined
[2026-01-09 14:26:45] 2026-01-09 19:25:43,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:26:45] 2026-01-09 19:25:44,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:26:45] 2026-01-09 19:25:44,188 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:44,415 | INFO     | all payload control threads have been joined
[2026-01-09 14:26:45] 2026-01-09 19:25:44,522 | INFO     | [data] control thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:44,655 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:44,659 | INFO     | [job] control thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,064 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,187 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,422 | INFO     | [payload] control thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:26:45] 2026-01-09 19:25:45,525 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,544 | INFO     | [job] validate thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,570 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,584 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,708 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,713 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:45,963 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:46,508 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:25:48,092 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:26:45] 2026-01-09 19:26:12,545 | INFO     | PID=3540822 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:26:45] 2026-01-09 19:26:12,545 | INFO     | .. there are 26 such processes running
[2026-01-09 14:26:45] 2026-01-09 19:26:12,545 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:26:45] 2026-01-09 19:26:12,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:26:45] 2026-01-09 19:26:12,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:26:45] 2026-01-09 19:26:38,518 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:26:45] 2026-01-09 19:26:39,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585509861184)>', '<ExcThread(monitor, started 140585237190400)>']
[2026-01-09 14:26:45] 2026-01-09 19:26:39,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:26:45] 2026-01-09 19:26:39,725 | INFO     | [monitor] control thread has ended
[2026-01-09 14:26:45] 2026-01-09 19:26:44,198 | INFO     | all workflow threads have been joined
[2026-01-09 14:26:45] 2026-01-09 19:26:44,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:26:45] 2026-01-09 19:26:44,202 | INFO     | traces error code: 0
[2026-01-09 14:26:45] 2026-01-09 19:26:44,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:26:45] 2026-01-09 19:26:44,594 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:26:45] 2026-01-09 19:26:44,597 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:26:45] 2026-01-09 19:26:44,630 [wrapper] pilotpid: 3540822
[2026-01-09 14:26:45] 2026-01-09 19:26:44,652 [wrapper] Pilot exit status: 0
[2026-01-09 14:26:45] 2026-01-09 19:26:44,708 [wrapper] pandaids: 6963167866
[2026-01-09 14:26:45] 2026-01-09 19:26:44,848 [wrapper] cleanup supervisor_pilot  575070 3540823
[2026-01-09 14:26:45] 2026-01-09 19:26:44,857 [wrapper] Test setup, not cleaning
[2026-01-09 14:26:45] 2026-01-09 19:26:44,867 [wrapper] apfmon messages muted
[2026-01-09 14:26:45] 2026-01-09 19:26:44,874 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:26:45] 2026-01-09 19:26:44,878 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:26:45]  *** Error codes and diagnostics ***
[2026-01-09 14:26:45]     "exeErrorCode": 0,
[2026-01-09 14:26:45]     "exeErrorDiag": "",
[2026-01-09 14:26:45]     "pilotErrorCode": 0,
[2026-01-09 14:26:45]     "pilotErrorDiag": "",
[2026-01-09 14:26:45]  *** Listing of results directory ***
[2026-01-09 14:26:45] total 443716
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 14:26:45] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas       100 Jan  9 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:26:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 11:00 run_atlas
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas       105 Jan  9 11:00 job.xml
[2026-01-09 14:26:45] -rw-r--r--. 2 boincer umatlas 223320349 Jan  9 11:00 EVNT.47898824._001341.pool.root.1
[2026-01-09 14:26:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:00 start_atlas.sh
[2026-01-09 14:26:45] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 11:00 shared
[2026-01-09 14:26:45] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 11:00 input.tar.gz
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas         0 Jan  9 11:00 boinc_lockfile
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 11:00 pandaJob.out
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas        57 Jan  9 11:00 setup.sh.local
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas    989377 Jan  9 11:01 agis_schedconf.cvmfs.json
[2026-01-09 14:26:45] drwx------. 5 boincer umatlas      4096 Jan  9 11:01 pilot3
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas      6957 Jan  9 14:19 init_data.xml
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas 222919492 Jan  9 14:24 HITS.47898826._036068.pool.root.1
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas       531 Jan  9 14:25 boinc_task_state.xml
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas      1060 Jan  9 14:25 memory_monitor_summary.json
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:25 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas    451078 Jan  9 14:25 log.47898826._036068.job.log.tgz.1
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas        95 Jan  9 14:25 pilot_heartbeat.json
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas      7835 Jan  9 14:25 heartbeat.json
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:26 boinc_mmap_file
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:26 wrapper_checkpoint.txt
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas      5011 Jan  9 14:26 pilotlog.txt
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas   1652013 Jan  9 14:26 log.47898826._036068.job.log.1
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas       357 Jan  9 14:26 output.list
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:26 runtime_log
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas   2119680 Jan  9 14:26 result.tar.gz
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 14:26 runtime_log.err
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas       662 Jan  9 14:26 OIOKDm1zFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9cgKDmNubG8n.diag
[2026-01-09 14:26:45] -rw-r--r--. 1 boincer umatlas     21097 Jan  9 14:26 stderr.txt
[2026-01-09 14:26:45] HITS file was successfully produced:
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas 222919492 Jan  9 14:24 shared/HITS.pool.root.1
[2026-01-09 14:26:45]  *** Contents of shared directory: ***
[2026-01-09 14:26:45] total 438460
[2026-01-09 14:26:45] -rw-r--r--. 2 boincer umatlas 223320349 Jan  9 11:00 ATLAS.root_0
[2026-01-09 14:26:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:00 start_atlas.sh
[2026-01-09 14:26:45] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 11:00 input.tar.gz
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas 222919492 Jan  9 14:24 HITS.pool.root.1
[2026-01-09 14:26:45] -rw-------. 1 boincer umatlas   2119680 Jan  9 14:26 result.tar.gz
14:26:46 (3534183): run_atlas exited; CPU time 44559.500689
14:26:46 (3534183): called boinc_finish(0)

</stderr_txt>
]]>

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