Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-09 16:03:55 (1522176): vboxwrapper version 26210
2026-01-09 16:03:55 (1522176): BOINC client version: 8.2.8
2026-01-09 16:03:55 (1522176): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-09 16:03:55 (1522176): Successfully copied 'init_data.xml' to the shared directory.
2026-01-09 16:03:55 (1522176): Create VM. (boinc_1ee4a4b66db26ec8, slot#3)
2026-01-09 16:03:55 (1522176): Setting Memory Size for VM. (4400MB)
2026-01-09 16:03:55 (1522176): Setting CPU Count for VM. (4)
2026-01-09 16:03:56 (1522176): Setting Chipset Options for VM.
2026-01-09 16:03:56 (1522176): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-09 16:03:56 (1522176): Setting Boot Options for VM.
2026-01-09 16:03:56 (1522176): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-09 16:03:56 (1522176): Enabling VM Network Access.
2026-01-09 16:03:56 (1522176): Disabling USB Support for VM.
2026-01-09 16:03:56 (1522176): Disabling COM Port Support for VM.
2026-01-09 16:03:56 (1522176): Disabling LPT Port Support for VM.
2026-01-09 16:03:56 (1522176): Disabling Audio Support for VM.
2026-01-09 16:03:56 (1522176): Disabling Clipboard Support for VM.
2026-01-09 16:03:56 (1522176): Disabling Drag and Drop Support for VM.
2026-01-09 16:03:57 (1522176): Adding storage controller(s) to VM.
2026-01-09 16:03:57 (1522176): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-09 16:03:58 (1522176): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-09 16:03:58 (1522176): forwarding host port 48063 to guest port 80
2026-01-09 16:03:58 (1522176): Enabling remote desktop for VM.
2026-01-09 16:03:58 (1522176): Required extension pack not installed, remote desktop not enabled.
2026-01-09 16:03:58 (1522176): Enabling shared directory for VM.
2026-01-09 16:03:59 (1522176): Starting VM using VBoxManage interface. (boinc_1ee4a4b66db26ec8, slot#3)
2026-01-09 16:04:00 (1522176): Successfully started VM. (PID = '1522912')
2026-01-09 16:04:00 (1522176): Reporting VM Process ID to BOINC.
2026-01-09 16:04:00 (1522176): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-09 16:04:00 (1522176): Guest Log: CPUID EDX: 0x178bfbff
2026-01-09 16:04:00 (1522176): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-09 16:04:00 (1522176): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-09 16:04:00 (1522176): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-09 16:04:00 (1522176): Detected: Web Application Enabled (http://localhost:48063)
2026-01-09 16:04:00 (1522176): Preference change detected
2026-01-09 16:04:00 (1522176): Setting CPU throttle for VM. (100%)
2026-01-09 16:04:00 (1522176): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-09 16:04:02 (1522176): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-09 16:04:02 (1522176): Guest Log: BIOS: Booting from Hard Disk...
2026-01-09 16:04:05 (1522176): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-09 16:04:05 (1522176): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-09 16:04:05 (1522176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-09 16:04:11 (1522176): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 16:07:11 (1522176): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-09 16:07:11 (1522176): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-09 16:07:11 (1522176): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 16:07:20 (1522176): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-09 16:07:20 (1522176): Guest Log: 00:00:00.000312 main     Log opened 2026-01-09T16:04:18.652376000Z
2026-01-09 16:07:20 (1522176): Guest Log: 00:00:00.000544 main     OS Product: Linux
2026-01-09 16:07:20 (1522176): Guest Log: 00:00:00.000602 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-09 16:07:20 (1522176): Guest Log: 00:00:00.000634 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-09 16:07:20 (1522176): Guest Log: 00:00:00.000664 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-09 16:07:20 (1522176): Guest Log: 00:00:00.000664 main     Process ID: 1298
2026-01-09 16:07:20 (1522176): Guest Log: 00:00:00.000665 main     Package type: LINUX_64BITS_GENERIC
2026-01-09 16:07:20 (1522176): Guest Log: 00:00:00.004096 main     5.2.32 r132073 started. Verbose level = 0
2026-01-09 16:07:21 (1522176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-09 16:07:21 (1522176): Guest Log: [INFO] Mounting shared directory
2026-01-09 16:07:21 (1522176): Guest Log: [INFO] Checking for init_data.xml
2026-01-09 16:07:28 (1522176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-09 16:07:28 (1522176): Guest Log: [INFO] Detected branch: prod
2026-01-09 16:07:29 (1522176): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-09 16:07:29 (1522176): Guest Log: Copying input files
2026-01-09 16:07:30 (1522176): Guest Log: Copied input files into RunAtlas.
2026-01-09 16:07:31 (1522176): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-09 16:07:31 (1522176): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-09 16:07:31 (1522176): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-09 16:07:31 (1522176): Guest Log: Further information can be found at the LHC@home message board.
2026-01-09 16:08:07 (1522176): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-09 16:08:07 (1522176): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-09 16:08:07 (1522176): Guest Log: 2.6.3.0 1575 0 30124 154948 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-09 16:08:08 (1522176): Guest Log: copied the webapp to /var/www
2026-01-09 16:08:08 (1522176): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-09 16:08:08 (1522176): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-09 16:08:09 (1522176): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-09 16:08:09 (1522176): Guest Log:  *** Starting ATLAS job. (PandaID=6963167532 taskID=47898826) ***
2026-01-09 16:24:42 (1522176): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 16:27:42 (1522176): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 16:31:57 (1522176): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 16:32:18 (1522176): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 17:11:03 (1522176): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 17:11:23 (1522176): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 17:49:17 (1522176): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 17:49:37 (1522176): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 17:50:07 (1522176): Status Report: Elapsed Time: '6000.000000'
2026-01-09 17:50:07 (1522176): Status Report: CPU Time: '27465.240000'
2026-01-09 18:05:14 (1522176): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 18:05:34 (1522176): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 18:43:28 (1522176): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 18:43:48 (1522176): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 19:21:11 (1522176): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 19:21:32 (1522176): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 19:26:43 (1522176): Guest Log:  *** Job finished ***
2026-01-09 19:26:43 (1522176): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:42,933 | INFO     | end of generic workflow (traces error code: 0)
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:42,933 | INFO     | traces error code: 0
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:42,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,035 | INFO     | PID=5992 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,035 | INFO     | found 0 job(s) in 20 queues
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,036 | CRITICAL | thread 'MainThread' is not alive
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,036 | INFO     | [monitor] control thread has ended
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,198 [wrapper] ==== pilot stdout END ====
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,210 [wrapper] ==== wrapper stdout RESUME ====
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,232 [wrapper] pilotpid: 5992
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,252 [wrapper] Pilot exit status: 0
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,344 [wrapper] pandaids: 6963167532
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,476 [wrapper] cleanup supervisor_pilot  9939 5993
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,496 [wrapper] Test setup, not cleaning
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,511 [wrapper] apfmon messages muted
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,529 [wrapper] ==== wrapper stdout END ====
2026-01-09 19:26:43 (1522176): Guest Log: 2026-01-09 19:18:43,537 [wrapper] ==== wrapper stderr END ====
2026-01-09 19:26:43 (1522176): Guest Log:  *** Error codes and diagnostics ***
2026-01-09 19:26:43 (1522176): Guest Log:     "exeErrorCode": 0,
2026-01-09 19:26:43 (1522176): Guest Log:     "exeErrorDiag": "",
2026-01-09 19:26:43 (1522176): Guest Log:     "pilotErrorCode": 0,
2026-01-09 19:26:43 (1522176): Guest Log:     "pilotErrorDiag": "",
2026-01-09 19:26:43 (1522176): Guest Log:  *** Listing of results directory ***
2026-01-09 19:26:43 (1522176): Guest Log: total 221040
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 00:57 pilot3.tar.gz
2026-01-09 19:26:43 (1522176): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 00:57 runpilot2-wrapper.sh
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 00:57 queuedata.json
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 atlas atlas    592395 Jan  9 16:04 input.tar.gz
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Jan  9 16:04 start_atlas.sh
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 atlas atlas      9090 Jan  9 16:04 init_data.xml
2026-01-09 19:26:43 (1522176): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  9 16:04 EVNT.47898824._001327.pool.root.1 -> /data/./ATLAS.root_0
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan  9 16:05 pandaJob.out
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas    989377 Jan  9 16:06 agis_schedconf.cvmfs.json
2026-01-09 19:26:43 (1522176): Guest Log: drwx------. 5 atlas atlas      4096 Jan  9 16:06 pilot3
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas 218840291 Jan  9 19:17 HITS.47898826._035773.pool.root.1
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas      1040 Jan  9 19:17 memory_monitor_summary.json
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  9 19:17 agis_ddmendpoints.agis.ALL.json
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas    367113 Jan  9 19:17 log.47898826._035773.job.log.tgz.1
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas        95 Jan  9 19:17 pilot_heartbeat.json
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas      7850 Jan  9 19:18 heartbeat.json
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas       814 Jan  9 19:18 pilotlog.txt
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas   1463268 Jan  9 19:18 log.47898826._035773.job.log.1
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas       357 Jan  9 19:18 output.list
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  9 19:18 runtime_log
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas   1853440 Jan  9 19:18 result.tar.gz
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 atlas atlas      8774 Jan  9 19:18 runtime_log.err
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas       667 Jan  9 19:18 gzxKDmpzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAbgKDmI93x9n.diag
2026-01-09 19:26:43 (1522176): Guest Log: Looking for outputfile HITS.47898826._035773.pool.root.1
2026-01-09 19:26:43 (1522176): Guest Log: HITS file was successfully produced
2026-01-09 19:26:43 (1522176): Guest Log: -rw-------. 1 atlas atlas 218840291 Jan  9 19:17 /home/atlas/RunAtlas/HITS.47898826._035773.pool.root.1
2026-01-09 19:26:43 (1522176): Guest Log: Successfully finished the ATLAS job!
2026-01-09 19:26:43 (1522176): Guest Log: Copying the results back to the shared directory!
2026-01-09 19:26:43 (1522176): Guest Log:  *** Contents of shared directory: ***
2026-01-09 19:26:43 (1522176): Guest Log: total 222548
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 root root 225409879 Jan  9 16:03 ATLAS.root_0
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 root root      9090 Jan  9 16:03 init_data.xml
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 root root    592395 Jan  9 16:03 input.tar.gz
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 root root   1853440 Jan  9  2026 result.tar.gz
2026-01-09 19:26:43 (1522176): Guest Log: -rw-r--r--. 1 root root     15847 Jan  9 16:03 start_atlas.sh
2026-01-09 19:26:43 (1522176): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-09 19:26:43 (1522176): VM Completion File Detected.
2026-01-09 19:26:43 (1522176): Powering off VM.
2026-01-09 19:26:43 (1522176): Successfully stopped VM.
2026-01-09 19:26:43 (1522176): Deregistering VM. (boinc_1ee4a4b66db26ec8, slot#3)
2026-01-09 19:26:44 (1522176): Removing network bandwidth throttle group from VM.
2026-01-09 19:26:44 (1522176): Removing VM from VirtualBox.
2026-01-09 19:26:49 (1522176): called boinc_finish(0)

</stderr_txt>
]]>

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