Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:14 (2285525): wrapper (7.7.26015): starting
14:48:14 (2285525): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 14:48:14] Arguments: --nthreads 3
[2026-01-10 14:48:14] Threads: 3
[2026-01-10 14:48:14] Checking for CVMFS
[2026-01-10 14:48:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 14:48:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 14:48:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 14:48:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 14:48:15] 2.13.3.0 2137178 1127 60596 154969 0 81 45498499 52428800 0 130560 0 473330 99.982 41017 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 14:48:15] CVMFS is ok
[2026-01-10 14:48:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 14:48:15] Checking for apptainer binary...
[2026-01-10 14:48:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 14:48:15] Running /usr/bin/apptainer --version
[2026-01-10 14:48:15] apptainer version 1.4.4-1.el9
[2026-01-10 14:48:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 14:48:15] testio004
[2026-01-10 14:48:15] apptainer works
[2026-01-10 14:48:15] Set ATHENA_PROC_NUMBER=3
[2026-01-10 14:48:15] Set ATHENA_CORE_NUMBER=3
[2026-01-10 14:48:15] Starting ATLAS job with PandaID=6963144683
[2026-01-10 14:48:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:40:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:40:06] 2026-01-10 08:39:42,558 | INFO     | mean x: 1768029208.0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,558 | INFO     | mean y: 2334676.233532934
[2026-01-10 17:40:06] 2026-01-10 08:39:42,558 | INFO     | intersect: -12376559546.02489
[2026-01-10 17:40:06] 2026-01-10 08:39:42,558 | INFO     | chi2: 1.9744296240310222
[2026-01-10 17:40:06] 2026-01-10 08:39:42,559 | INFO     | sum of square deviations: 1318277740.5
[2026-01-10 17:40:06] 2026-01-10 08:39:42,559 | INFO     | sum of deviations: 9625074130.499985
[2026-01-10 17:40:06] 2026-01-10 08:39:42,559 | INFO     | mean x: 1768029055.5
[2026-01-10 17:40:06] 2026-01-10 08:39:42,559 | INFO     | mean y: 2334087.1790123456
[2026-01-10 17:40:06] 2026-01-10 08:39:42,559 | INFO     | intersect: -12906486414.948984
[2026-01-10 17:40:06] 2026-01-10 08:39:42,559 | INFO     | chi2: 1.9757707104570004
[2026-01-10 17:40:06] 2026-01-10 08:39:42,559 | INFO     | current chi2=1.9757707104570004 (change=-0.0679227261207826 %)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,559 | INFO     | right removable region: 161
[2026-01-10 17:40:06] 2026-01-10 08:39:42,560 | INFO     | sum of square deviations: 1318277740.5
[2026-01-10 17:40:06] 2026-01-10 08:39:42,560 | INFO     | sum of deviations: -18682009358.499996
[2026-01-10 17:40:06] 2026-01-10 08:39:42,560 | INFO     | mean x: 1768029360.5
[2026-01-10 17:40:06] 2026-01-10 08:39:42,560 | INFO     | mean y: 2369241.203703704
[2026-01-10 17:40:06] 2026-01-10 08:39:42,560 | INFO     | intersect: 25058046086.99185
[2026-01-10 17:40:06] 2026-01-10 08:39:42,560 | INFO     | chi2: 0.23651282635196372
[2026-01-10 17:40:06] 2026-01-10 08:39:42,560 | INFO     | current chi2=0.23651282635196372 (change=88.02120756934876 %)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,560 | INFO     | sum of square deviations: 1199940638.0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,561 | INFO     | sum of deviations: -10802753092.999998
[2026-01-10 17:40:06] 2026-01-10 08:39:42,561 | INFO     | mean x: 1768029513.0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,561 | INFO     | mean y: 2359061.8343949043
[2026-01-10 17:40:06] 2026-01-10 08:39:42,561 | INFO     | intersect: 15919468363.099703
[2026-01-10 17:40:06] 2026-01-10 08:39:42,561 | INFO     | chi2: 0.17727852351222947
[2026-01-10 17:40:06] 2026-01-10 08:39:42,561 | INFO     | current chi2=0.17727852351222947 (change=25.044858561533328 %)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,561 | INFO     | sum of square deviations: 1088905998.0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | sum of deviations: -1552452897.5
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | mean x: 1768029665.5
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | mean y: 2346351.638157895
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | intersect: 2523025622.496055
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | chi2: 0.061783521594214366
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | current chi2=0.061783521594214366 (change=65.14889656673373 %)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | sum of square deviations: 984941258.0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | sum of deviations: 1887352565.9999995
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | mean x: 1768029818.0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | mean y: 2341419.7346938774
[2026-01-10 17:40:06] 2026-01-10 08:39:42,562 | INFO     | intersect: -3385571906.7337685
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | chi2: 0.0017174419784541676
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | current chi2=0.0017174419784541676 (change=97.22022647117126 %)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | sum of square deviations: 887813855.5
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | sum of deviations: 1419528041.4999998
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | mean x: 1768029970.5
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | mean y: 2342154.4295774647
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | intersect: -2824565880.164807
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | chi2: 0.001549605802575837
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | current chi2=0.001549605802575837 (change=9.772451004685252 %)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | left removable region: 50
[2026-01-10 17:40:06] 2026-01-10 08:39:42,563 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | sum of deviations: 216279098.99999994
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | mean x: 1768030550.0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | mean y: 2343399.810810811
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | intersect: -899419172.7380054
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | chi2: 0.0010407141744613808
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | current memory leak: 0.51 B/s (using 111 data points, chi2=0.00)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | could have reported an average CPU frequency of 3614 MHz (9 samples)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | ..............................
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | . Timing measurements:
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | . get job = 0 s
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | . initial setup = 5 s
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | . payload setup = 4 s
[2026-01-10 17:40:06] 2026-01-10 08:39:42,564 | INFO     | . stage-in = 0 s
[2026-01-10 17:40:06] 2026-01-10 08:39:42,565 | INFO     | . payload execution = 10162 s
[2026-01-10 17:40:06] 2026-01-10 08:39:42,565 | INFO     | . stage-out = 0 s
[2026-01-10 17:40:06] 2026-01-10 08:39:42,565 | INFO     | . log creation = 0 s
[2026-01-10 17:40:06] 2026-01-10 08:39:42,565 | INFO     | ..............................
[2026-01-10 17:40:06] 2026-01-10 08:39:42,601 | INFO     | 
[2026-01-10 17:40:06] 2026-01-10 08:39:42,601 | INFO     | job summary report
[2026-01-10 17:40:06] 2026-01-10 08:39:42,601 | INFO     | --------------------------------------------------
[2026-01-10 17:40:06] 2026-01-10 08:39:42,601 | INFO     | PanDA job id: 6963144683
[2026-01-10 17:40:06] 2026-01-10 08:39:42,601 | INFO     | task id: 47898826
[2026-01-10 17:40:06] 2026-01-10 08:39:42,601 | INFO     | errors: (none)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,601 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | pilot state: finished 
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | transexitcode: 0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | exeerrorcode: 0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | exeerrordiag: 
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | exitcode: 0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | exitmsg: OK
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | cpuconsumptiontime: 27222 s
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | nevents: 400
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | neventsw: 0
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | pid: 2295729
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | pgrp: 2295729
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | corecount: 3
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | event service: False
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | sizes: {0: 2283797, 1: 2283996, 4: 2284258, 11: 2284286, 10170: 2312963, 10171: 2321961, 10173: 2322145, 10247: 2322403}
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | --------------------------------------------------
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | 
[2026-01-10 17:40:06] 2026-01-10 08:39:42,602 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,613 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,613 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:40:06] 2026-01-10 08:39:42,613 | INFO     | job 6963144683 has completed (purged errors)
[2026-01-10 17:40:06] 2026-01-10 08:39:42,613 | INFO     | overall cleanup function is called
[2026-01-10 17:40:06] 2026-01-10 08:39:43,619 | INFO     | --- collectZombieJob: --- 10, [2295729]
[2026-01-10 17:40:06] 2026-01-10 08:39:43,619 | INFO     | zombie collector waiting for pid 2295729
[2026-01-10 17:40:06] 2026-01-10 08:39:43,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:40:06] 2026-01-10 08:39:43,619 | INFO     | collected zombie processes
[2026-01-10 17:40:06] 2026-01-10 08:39:43,619 | INFO     | will attempt to kill all subprocesses of pid=2295729
[2026-01-10 17:40:06] 2026-01-10 08:39:43,650 | INFO     | process IDs to be killed: [2295729] (in reverse order)
[2026-01-10 17:40:06] 2026-01-10 08:39:43,671 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:40:06] 2026-01-10 08:39:43,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:40:06] 2026-01-10 08:39:43,672 | INFO     | did not find any defunct processes belonging to 2295729
[2026-01-10 17:40:06] 2026-01-10 08:39:43,673 | INFO     | did not find any defunct processes belonging to 2295729
[2026-01-10 17:40:06] 2026-01-10 08:39:43,673 | INFO     | ready for new job
[2026-01-10 17:40:06] 2026-01-10 08:39:43,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:40:06] 2026-01-10 08:39:43,674 | INFO     | ***************************************
[2026-01-10 17:40:06] 2026-01-10 08:39:43,674 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:40:06] 2026-01-10 08:39:43,674 | INFO     | ***************************************
[2026-01-10 17:40:06] 2026-01-10 08:39:43,674 | INFO     | 
[2026-01-10 17:40:06] 2026-01-10 08:39:43,675 | INFO     | architecture information:
[2026-01-10 17:40:06] 2026-01-10 08:39:43,675 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:40:06] 2026-01-10 08:39:43,682 | INFO     | cat /etc/os-release:
[2026-01-10 17:40:06] NAME="CentOS Linux"
[2026-01-10 17:40:06] VERSION="7 (Core)"
[2026-01-10 17:40:06] ID="centos"
[2026-01-10 17:40:06] ID_LIKE="rhel fedora"
[2026-01-10 17:40:06] VERSION_ID="7"
[2026-01-10 17:40:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:40:06] ANSI_COLOR="0;31"
[2026-01-10 17:40:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:40:06] HOME_URL="https://www.centos.org/"
[2026-01-10 17:40:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:40:06] 
[2026-01-10 17:40:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:40:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:40:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:40:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:40:06] 
[2026-01-10 17:40:06] 2026-01-10 08:39:43,683 | INFO     | ***************************************
[2026-01-10 17:40:06] 2026-01-10 08:39:44,185 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-10 17:40:06] 2026-01-10 08:39:44,195 | INFO     | sufficient remaining disk space (314834944000 B)
[2026-01-10 17:40:06] 2026-01-10 08:39:44,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:40:06] 2026-01-10 08:39:44,195 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | INFO     | update_server=False
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:40:06] 2026-01-10 08:39:44,196 | INFO     | aborting loop
[2026-01-10 17:40:06] 2026-01-10 08:39:44,286 | INFO     | all data control threads have been joined
[2026-01-10 17:40:06] 2026-01-10 08:39:45,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:40:06] 2026-01-10 08:39:45,201 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:45,201 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:45,201 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:45,292 | INFO     | [data] control thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:45,627 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:45,633 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:45,664 | INFO     | all payload control threads have been joined
[2026-01-10 17:40:06] 2026-01-10 08:39:45,698 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:45,767 | INFO     | all job control threads have been joined
[2026-01-10 17:40:06] 2026-01-10 08:39:45,945 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:46,472 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:46,476 | INFO     | [job] validate thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:46,502 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:46,617 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:46,669 | INFO     | [payload] control thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:46,772 | INFO     | [job] control thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:47,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:40:06] 2026-01-10 08:39:47,037 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:51,027 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:40:06] 2026-01-10 08:39:59,602 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:40:06] 2026-01-10 08:40:01,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456833779520)>', '<ExcThread(monitor, started 140456461575936)>']
[2026-01-10 17:40:06] 2026-01-10 08:40:02,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:40:06] 2026-01-10 08:40:02,286 | INFO     | [monitor] control thread has ended
[2026-01-10 17:40:06] 2026-01-10 08:40:06,452 | INFO     | all workflow threads have been joined
[2026-01-10 17:40:06] 2026-01-10 08:40:06,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:40:06] 2026-01-10 08:40:06,452 | INFO     | traces error code: 0
[2026-01-10 17:40:06] 2026-01-10 08:40:06,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:40:06] 2026-01-10 08:40:06,514 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:40:06] 2026-01-10 08:40:06,516 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:40:06] 2026-01-10 08:40:06,517 [wrapper] pilotpid: 2289197
[2026-01-10 17:40:06] 2026-01-10 08:40:06,519 [wrapper] Pilot exit status: 0
[2026-01-10 17:40:06] 2026-01-10 08:40:06,525 [wrapper] pandaids: 6963144683
[2026-01-10 17:40:06] 2026-01-10 08:40:06,536 [wrapper] cleanup supervisor_pilot 2314912 2289198
[2026-01-10 17:40:06] 2026-01-10 08:40:06,537 [wrapper] Test setup, not cleaning
[2026-01-10 17:40:06] 2026-01-10 08:40:06,539 [wrapper] apfmon messages muted
[2026-01-10 17:40:06] 2026-01-10 08:40:06,540 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:40:06] 2026-01-10 08:40:06,542 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:40:06]  *** Error codes and diagnostics ***
[2026-01-10 17:40:06]     "exeErrorCode": 0,
[2026-01-10 17:40:06]     "exeErrorDiag": "",
[2026-01-10 17:40:06]     "pilotErrorCode": 0,
[2026-01-10 17:40:06]     "pilotErrorDiag": "",
[2026-01-10 17:40:06]  *** Listing of results directory ***
[2026-01-10 17:40:06] total 438532
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc    579449 Jan  8 21:19 pilot3.tar.gz
[2026-01-10 17:40:06] -rwx------. 1 boinc boinc     36322 Jan  8 21:23 runpilot2-wrapper.sh
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc      5112 Jan  8 21:24 queuedata.json
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc       100 Jan 10 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:40:06] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 14:48 run_atlas
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc       105 Jan 10 14:48 job.xml
[2026-01-10 17:40:06] -rw-r--r--. 2 boinc boinc 226173358 Jan 10 14:48 EVNT.47898824._001034.pool.root.1
[2026-01-10 17:40:06] -rw-r--r--. 2 boinc boinc     15847 Jan 10 14:48 start_atlas.sh
[2026-01-10 17:40:06] drwxrwx--x. 2 boinc boinc        68 Jan 10 14:48 shared
[2026-01-10 17:40:06] -rw-r--r--. 2 boinc boinc    592402 Jan 10 14:48 input.tar.gz
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc         0 Jan 10 14:48 boinc_lockfile
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc      2518 Jan 10 14:48 pandaJob.out
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc    989374 Jan 10 14:48 agis_schedconf.cvmfs.json
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc   1516240 Jan 10 14:48 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:40:06] drwx------. 5 boinc boinc      4096 Jan 10 14:48 pilot3
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc      9321 Jan 10 15:12 init_data.xml
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc 215488660 Jan 10 17:38 HITS.47898826._025810.pool.root.1
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc       530 Jan 10 17:38 boinc_task_state.xml
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc      1015 Jan 10 17:38 memory_monitor_summary.json
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc    325736 Jan 10 17:38 log.47898826._025810.job.log.tgz.1
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc        95 Jan 10 17:39 pilot_heartbeat.json
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc      7766 Jan 10 17:39 heartbeat.json
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc      8192 Jan 10 17:39 boinc_mmap_file
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc        28 Jan 10 17:39 wrapper_checkpoint.txt
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc      4553 Jan 10 17:40 pilotlog.txt
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc   1417486 Jan 10 17:40 log.47898826._025810.job.log.1
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc       357 Jan 10 17:40 output.list
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc       620 Jan 10 17:40 runtime_log
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc   1761280 Jan 10 17:40 result.tar.gz
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc       646 Jan 10 17:40 z2yNDm0D4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtOfKDmWiiWBn.diag
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc      8776 Jan 10 17:40 runtime_log.err
[2026-01-10 17:40:06] -rw-r--r--. 1 boinc boinc     20516 Jan 10 17:40 stderr.txt
[2026-01-10 17:40:06] HITS file was successfully produced:
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc 215488660 Jan 10 17:38 shared/HITS.pool.root.1
[2026-01-10 17:40:06]  *** Contents of shared directory: ***
[2026-01-10 17:40:06] total 433632
[2026-01-10 17:40:06] -rw-r--r--. 2 boinc boinc 226173358 Jan 10 14:48 ATLAS.root_0
[2026-01-10 17:40:06] -rw-r--r--. 2 boinc boinc     15847 Jan 10 14:48 start_atlas.sh
[2026-01-10 17:40:06] -rw-r--r--. 2 boinc boinc    592402 Jan 10 14:48 input.tar.gz
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc 215488660 Jan 10 17:38 HITS.pool.root.1
[2026-01-10 17:40:06] -rw-------. 1 boinc boinc   1761280 Jan 10 17:40 result.tar.gz
17:40:07 (2285525): run_atlas exited; CPU time 27261.550233
17:40:07 (2285525): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN