Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:50 (791217): wrapper (7.7.26015): starting
10:01:50 (791217): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 10:01:50] Arguments: --nthreads 9
[2026-01-09 10:01:50] Threads: 9
[2026-01-09 10:01:50] Checking for CVMFS
[2026-01-09 10:01:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:01:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:01:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:02:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:02:11] 2.13.3.0 6683 14142 167988 154946 1 383 32424613 40960001 19795 16776704 0 19423489 99.739 16178973 39996 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 10:02:11] CVMFS is ok
[2026-01-09 10:02:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:02:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:02:11] Further information can be found at the LHC@home message board.
[2026-01-09 10:02:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:02:11] Checking for apptainer binary...
[2026-01-09 10:02:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:02:11] Running /usr/bin/apptainer --version
[2026-01-09 10:02:11] apptainer version 1.4.5-2.el9
[2026-01-09 10:02:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:02:12] c-211-35-3.aglt2.org
[2026-01-09 10:02:12] apptainer works
[2026-01-09 10:02:12] Set ATHENA_PROC_NUMBER=9
[2026-01-09 10:02:12] Set ATHENA_CORE_NUMBER=9
[2026-01-09 10:02:12] Starting ATLAS job with PandaID=6963167294
[2026-01-09 10:02:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:38:55]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:38:55] 2026-01-09 17:37:54,687 | INFO     | chi2: 1.3866195365049907
[2026-01-09 12:38:55] 2026-01-09 17:37:54,688 | INFO     | sum of square deviations: 985057935.564628
[2026-01-09 12:38:55] 2026-01-09 17:37:54,688 | INFO     | sum of deviations: 27811028133.952385
[2026-01-09 12:38:55] 2026-01-09 17:37:54,689 | INFO     | mean x: 1767975443.7210884
[2026-01-09 12:38:55] 2026-01-09 17:37:54,689 | INFO     | mean y: 2538971.0476190476
[2026-01-09 12:38:55] 2026-01-09 17:37:54,689 | INFO     | intersect: -49912509708.07469
[2026-01-09 12:38:55] 2026-01-09 17:37:54,689 | INFO     | chi2: 1.3871826466594706
[2026-01-09 12:38:55] 2026-01-09 17:37:54,689 | INFO     | current chi2=1.3871826466594706 (change=-0.040610285637485276 %)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,689 | INFO     | right removable region: 146
[2026-01-09 12:38:55] 2026-01-09 17:37:54,689 | INFO     | sum of square deviations: 985019998.176872
[2026-01-09 12:38:55] 2026-01-09 17:37:54,690 | INFO     | sum of deviations: 5590970211.79592
[2026-01-09 12:38:55] 2026-01-09 17:37:54,690 | INFO     | mean x: 1767975748.7414966
[2026-01-09 12:38:55] 2026-01-09 17:37:54,690 | INFO     | mean y: 2574441.836734694
[2026-01-09 12:38:55] 2026-01-09 17:37:54,691 | INFO     | intersect: -10032449988.820948
[2026-01-09 12:38:55] 2026-01-09 17:37:54,691 | INFO     | chi2: 0.013689064386492438
[2026-01-09 12:38:55] 2026-01-09 17:37:54,691 | INFO     | current chi2=0.013689064386492438 (change=99.01277430282022 %)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,691 | INFO     | sum of square deviations: 887859347.8309845
[2026-01-09 12:38:55] 2026-01-09 17:37:54,692 | INFO     | sum of deviations: 3978358223.8169
[2026-01-09 12:38:55] 2026-01-09 17:37:54,692 | INFO     | mean x: 1767975901.2676055
[2026-01-09 12:38:55] 2026-01-09 17:37:54,692 | INFO     | mean y: 2576909.8732394367
[2026-01-09 12:38:55] 2026-01-09 17:37:54,692 | INFO     | intersect: -7919445292.743721
[2026-01-09 12:38:55] 2026-01-09 17:37:54,692 | INFO     | chi2: 0.0015495681398991718
[2026-01-09 12:38:55] 2026-01-09 17:37:54,693 | INFO     | current chi2=0.0015495681398991718 (change=88.68024799833513 %)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,693 | INFO     | sum of square deviations: 797320797.4306594
[2026-01-09 12:38:55] 2026-01-09 17:37:54,694 | INFO     | sum of deviations: 3758560274.1532845
[2026-01-09 12:38:55] 2026-01-09 17:37:54,694 | INFO     | mean x: 1767976053.7810218
[2026-01-09 12:38:55] 2026-01-09 17:37:54,694 | INFO     | mean y: 2577295.905109489
[2026-01-09 12:38:55] 2026-01-09 17:37:54,694 | INFO     | intersect: -8331639725.410629
[2026-01-09 12:38:55] 2026-01-09 17:37:54,694 | INFO     | chi2: 0.0009577892039403272
[2026-01-09 12:38:55] 2026-01-09 17:37:54,694 | INFO     | current chi2=0.0009577892039403272 (change=38.18992664610094 %)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,694 | INFO     | sum of square deviations: 713154093.4772751
[2026-01-09 12:38:55] 2026-01-09 17:37:54,695 | INFO     | sum of deviations: 2922682672.8409095
[2026-01-09 12:38:55] 2026-01-09 17:37:54,695 | INFO     | mean x: 1767976206.2954545
[2026-01-09 12:38:55] 2026-01-09 17:37:54,695 | INFO     | mean y: 2578809.234848485
[2026-01-09 12:38:55] 2026-01-09 17:37:54,695 | INFO     | intersect: -7243026974.1376705
[2026-01-09 12:38:55] 2026-01-09 17:37:54,696 | INFO     | chi2: 0.0005646323015058615
[2026-01-09 12:38:55] 2026-01-09 17:37:54,696 | INFO     | current chi2=0.0005646323015058615 (change=41.048374821623106 %)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,696 | INFO     | sum of square deviations: 635159735.8267732
[2026-01-09 12:38:55] 2026-01-09 17:37:54,697 | INFO     | sum of deviations: 2425530925.094487
[2026-01-09 12:38:55] 2026-01-09 17:37:54,697 | INFO     | mean x: 1767976358.7795277
[2026-01-09 12:38:55] 2026-01-09 17:37:54,697 | INFO     | mean y: 2579778.57480315
[2026-01-09 12:38:55] 2026-01-09 17:37:54,697 | INFO     | intersect: -6748920814.380339
[2026-01-09 12:38:55] 2026-01-09 17:37:54,697 | INFO     | chi2: 0.00048722576390400465
[2026-01-09 12:38:55] 2026-01-09 17:37:54,697 | INFO     | current chi2=0.00048722576390400465 (change=13.70919400031054 %)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,697 | INFO     | left removable region: 50
[2026-01-09 12:38:55] 2026-01-09 17:37:54,697 | INFO     | sum of square deviations: 274289994.73958343
[2026-01-09 12:38:55] 2026-01-09 17:37:54,698 | INFO     | sum of deviations: 895825078.3958327
[2026-01-09 12:38:55] 2026-01-09 17:37:54,698 | INFO     | mean x: 1767976938.3854167
[2026-01-09 12:38:55] 2026-01-09 17:37:54,698 | INFO     | mean y: 2582808.8541666665
[2026-01-09 12:38:55] 2026-01-09 17:37:54,698 | INFO     | intersect: -5771590911.681396
[2026-01-09 12:38:55] 2026-01-09 17:37:54,698 | INFO     | chi2: 0.00040529807312583466
[2026-01-09 12:38:55] 2026-01-09 17:37:54,699 | INFO     | current memory leak: 3.27 B/s (using 96 data points, chi2=0.00)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,699 | INFO     | could have reported an average CPU frequency of 2641 MHz (9 samples)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,699 | INFO     | ..............................
[2026-01-09 12:38:55] 2026-01-09 17:37:54,699 | INFO     | . Timing measurements:
[2026-01-09 12:38:55] 2026-01-09 17:37:54,699 | INFO     | . get job = 0 s
[2026-01-09 12:38:55] 2026-01-09 17:37:54,700 | INFO     | . initial setup = 2 s
[2026-01-09 12:38:55] 2026-01-09 17:37:54,700 | INFO     | . payload setup = 9 s
[2026-01-09 12:38:55] 2026-01-09 17:37:54,700 | INFO     | . stage-in = 0 s
[2026-01-09 12:38:55] 2026-01-09 17:37:54,700 | INFO     | . payload execution = 9276 s
[2026-01-09 12:38:55] 2026-01-09 17:37:54,700 | INFO     | . stage-out = 1 s
[2026-01-09 12:38:55] 2026-01-09 17:37:54,700 | INFO     | . log creation = 0 s
[2026-01-09 12:38:55] 2026-01-09 17:37:54,700 | INFO     | ..............................
[2026-01-09 12:38:55] 2026-01-09 17:37:54,793 | INFO     | 
[2026-01-09 12:38:55] 2026-01-09 17:37:54,793 | INFO     | job summary report
[2026-01-09 12:38:55] 2026-01-09 17:37:54,793 | INFO     | --------------------------------------------------
[2026-01-09 12:38:55] 2026-01-09 17:37:54,793 | INFO     | PanDA job id: 6963167294
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | task id: 47898826
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | errors: (none)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | pilot state: finished 
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | transexitcode: 0
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | exeerrorcode: 0
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | exeerrordiag: 
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | exitcode: 0
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | exitmsg: OK
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | cpuconsumptiontime: 58223 s
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | nevents: 400
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | neventsw: 0
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | pid: 803087
[2026-01-09 12:38:55] 2026-01-09 17:37:54,794 | INFO     | pgrp: 803087
[2026-01-09 12:38:55] 2026-01-09 17:37:54,795 | INFO     | corecount: 9
[2026-01-09 12:38:55] 2026-01-09 17:37:54,795 | INFO     | event service: False
[2026-01-09 12:38:55] 2026-01-09 17:37:54,795 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2284027, 8: 2284289, 13: 2284317, 9289: 2312874, 9290: 2313001, 9292: 2322055, 9293: 2322111, 9300: 2322369}
[2026-01-09 12:38:55] 2026-01-09 17:37:54,795 | INFO     | --------------------------------------------------
[2026-01-09 12:38:55] 2026-01-09 17:37:54,795 | INFO     | 
[2026-01-09 12:38:55] 2026-01-09 17:37:54,795 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 12:38:55] 2026-01-09 17:37:54,816 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,816 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,816 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,816 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,818 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:38:55] 2026-01-09 17:37:54,818 | INFO     | job 6963167294 has completed (purged errors)
[2026-01-09 12:38:55] 2026-01-09 17:37:54,818 | INFO     | overall cleanup function is called
[2026-01-09 12:38:55] 2026-01-09 17:37:55,826 | INFO     | --- collectZombieJob: --- 10, [803087]
[2026-01-09 12:38:55] 2026-01-09 17:37:55,827 | INFO     | zombie collector waiting for pid 803087
[2026-01-09 12:38:55] 2026-01-09 17:37:55,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:38:55] 2026-01-09 17:37:55,827 | INFO     | collected zombie processes
[2026-01-09 12:38:55] 2026-01-09 17:37:55,827 | INFO     | will attempt to kill all subprocesses of pid=803087
[2026-01-09 12:38:55] 2026-01-09 17:37:56,192 | INFO     | process IDs to be killed: [803087] (in reverse order)
[2026-01-09 12:38:55] 2026-01-09 17:37:56,311 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:38:55] 2026-01-09 17:37:56,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:38:55] 2026-01-09 17:37:56,325 | INFO     | did not find any defunct processes belonging to 803087
[2026-01-09 12:38:55] 2026-01-09 17:37:56,338 | INFO     | did not find any defunct processes belonging to 803087
[2026-01-09 12:38:55] 2026-01-09 17:37:56,338 | INFO     | ready for new job
[2026-01-09 12:38:55] 2026-01-09 17:37:56,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:38:55] 2026-01-09 17:37:56,340 | INFO     | ***************************************
[2026-01-09 12:38:55] 2026-01-09 17:37:56,340 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:38:55] 2026-01-09 17:37:56,340 | INFO     | ***************************************
[2026-01-09 12:38:55] 2026-01-09 17:37:56,340 | INFO     | 
[2026-01-09 12:38:55] 2026-01-09 17:37:56,346 | INFO     | architecture information:
[2026-01-09 12:38:55] 2026-01-09 17:37:56,346 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:38:55] 2026-01-09 17:37:56,365 | INFO     | cat /etc/os-release:
[2026-01-09 12:38:55] NAME="CentOS Linux"
[2026-01-09 12:38:55] VERSION="7 (Core)"
[2026-01-09 12:38:55] ID="centos"
[2026-01-09 12:38:55] ID_LIKE="rhel fedora"
[2026-01-09 12:38:55] VERSION_ID="7"
[2026-01-09 12:38:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:38:55] ANSI_COLOR="0;31"
[2026-01-09 12:38:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:38:55] HOME_URL="https://www.centos.org/"
[2026-01-09 12:38:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:38:55] 
[2026-01-09 12:38:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:38:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:38:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:38:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:38:55] 
[2026-01-09 12:38:55] 2026-01-09 17:37:56,365 | INFO     | ***************************************
[2026-01-09 12:38:55] 2026-01-09 17:37:56,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 12:38:55] 2026-01-09 17:37:56,891 | INFO     | sufficient remaining disk space (126347116544 B)
[2026-01-09 12:38:55] 2026-01-09 17:37:56,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:38:55] 2026-01-09 17:37:56,891 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:38:55] 2026-01-09 17:37:56,891 | INFO     | update_server=False
[2026-01-09 12:38:55] 2026-01-09 17:37:56,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:38:55] 2026-01-09 17:37:57,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:38:55] 2026-01-09 17:37:57,270 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:38:55] 2026-01-09 17:37:57,271 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:38:55] 2026-01-09 17:37:57,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:38:55] 2026-01-09 17:37:57,271 | INFO     | will abort loop
[2026-01-09 12:38:55] 2026-01-09 17:37:57,332 | INFO     | all payload control threads have been joined
[2026-01-09 12:38:55] 2026-01-09 17:37:57,603 | INFO     | all data control threads have been joined
[2026-01-09 12:38:55] 2026-01-09 17:37:57,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:38:55] 2026-01-09 17:37:57,898 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,124 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,191 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,210 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,282 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,337 | INFO     | [payload] control thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,554 | INFO     | all job control threads have been joined
[2026-01-09 12:38:55] 2026-01-09 17:37:58,579 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,613 | INFO     | [data] control thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,659 | INFO     | [job] validate thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,676 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:58,875 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:59,056 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:59,481 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:59,560 | INFO     | [job] control thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:37:59,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:38:55] 2026-01-09 17:38:00,812 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:38:01,856 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:38:55] 2026-01-09 17:38:28,087 | INFO     | PID=796296 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 12:38:55] 2026-01-09 17:38:28,088 | INFO     | .. there are 17 such processes running
[2026-01-09 12:38:55] 2026-01-09 17:38:28,088 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:38:55] 2026-01-09 17:38:28,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:38:55] 2026-01-09 17:38:28,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:38:55] 2026-01-09 17:38:48,143 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:38:55] 2026-01-09 17:38:49,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140603842398016)>', '<ExcThread(monitor, started 140603388057344)>']
[2026-01-09 12:38:55] 2026-01-09 17:38:50,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:38:55] 2026-01-09 17:38:50,226 | INFO     | [monitor] control thread has ended
[2026-01-09 12:38:55] 2026-01-09 17:38:54,486 | INFO     | all workflow threads have been joined
[2026-01-09 12:38:55] 2026-01-09 17:38:54,487 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:38:55] 2026-01-09 17:38:54,487 | INFO     | traces error code: 0
[2026-01-09 12:38:55] 2026-01-09 17:38:54,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:38:55] 2026-01-09 17:38:54,629 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:38:55] 2026-01-09 17:38:54,652 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:38:55] 2026-01-09 17:38:54,667 [wrapper] pilotpid: 796296
[2026-01-09 12:38:55] 2026-01-09 17:38:54,680 [wrapper] Pilot exit status: 0
[2026-01-09 12:38:55] 2026-01-09 17:38:54,689 [wrapper] pandaids: 6963167294
[2026-01-09 12:38:55] 2026-01-09 17:38:54,876 [wrapper] cleanup supervisor_pilot 1169253 796297
[2026-01-09 12:38:55] 2026-01-09 17:38:54,898 [wrapper] Test setup, not cleaning
[2026-01-09 12:38:55] 2026-01-09 17:38:54,914 [wrapper] apfmon messages muted
[2026-01-09 12:38:55] 2026-01-09 17:38:54,924 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:38:55] 2026-01-09 17:38:54,926 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:38:55]  *** Error codes and diagnostics ***
[2026-01-09 12:38:55]     "exeErrorCode": 0,
[2026-01-09 12:38:55]     "exeErrorDiag": "",
[2026-01-09 12:38:55]     "pilotErrorCode": 0,
[2026-01-09 12:38:55]     "pilotErrorDiag": "",
[2026-01-09 12:38:55]  *** Listing of results directory ***
[2026-01-09 12:38:55] total 436176
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 12:38:55] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas       100 Jan  9 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:38:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 10:01 run_atlas
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas       105 Jan  9 10:01 job.xml
[2026-01-09 12:38:55] -rw-r--r--. 2 boincer umatlas 223328115 Jan  9 10:01 EVNT.47898824._001382.pool.root.1
[2026-01-09 12:38:55] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:01 start_atlas.sh
[2026-01-09 12:38:55] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 10:01 shared
[2026-01-09 12:38:55] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 10:01 input.tar.gz
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas         0 Jan  9 10:01 boinc_lockfile
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 10:02 pandaJob.out
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas        57 Jan  9 10:02 setup.sh.local
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas    989377 Jan  9 10:02 agis_schedconf.cvmfs.json
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas   1516240 Jan  9 10:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:38:55] drwx------. 5 boincer umatlas      4096 Jan  9 10:02 pilot3
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas      6858 Jan  9 12:27 init_data.xml
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas 216010089 Jan  9 12:37 HITS.47898826._035669.pool.root.1
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas       530 Jan  9 12:37 boinc_task_state.xml
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas      1042 Jan  9 12:37 memory_monitor_summary.json
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas    419318 Jan  9 12:37 log.47898826._035669.job.log.tgz.1
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas      7824 Jan  9 12:37 heartbeat.json
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas        95 Jan  9 12:38 pilot_heartbeat.json
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas        27 Jan  9 12:38 wrapper_checkpoint.txt
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:38 boinc_mmap_file
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas      5010 Jan  9 12:38 pilotlog.txt
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas   1275957 Jan  9 12:38 log.47898826._035669.job.log.1
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas       357 Jan  9 12:38 output.list
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:38 runtime_log
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas   1710080 Jan  9 12:38 result.tar.gz
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas       655 Jan  9 12:38 yReNDmnzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjplKDmKuux7m.diag
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas      9352 Jan  9 12:38 runtime_log.err
[2026-01-09 12:38:55] -rw-r--r--. 1 boincer umatlas     21094 Jan  9 12:38 stderr.txt
[2026-01-09 12:38:55] HITS file was successfully produced:
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas 216010089 Jan  9 12:37 shared/HITS.pool.root.1
[2026-01-09 12:38:55]  *** Contents of shared directory: ***
[2026-01-09 12:38:55] total 431320
[2026-01-09 12:38:55] -rw-r--r--. 2 boincer umatlas 223328115 Jan  9 10:01 ATLAS.root_0
[2026-01-09 12:38:55] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 10:01 start_atlas.sh
[2026-01-09 12:38:55] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 10:01 input.tar.gz
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas 216010089 Jan  9 12:37 HITS.pool.root.1
[2026-01-09 12:38:55] -rw-------. 1 boincer umatlas   1710080 Jan  9 12:38 result.tar.gz
12:38:57 (791217): run_atlas exited; CPU time 58584.815471
12:38:57 (791217): called boinc_finish(0)

</stderr_txt>
]]>

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