Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:46:41 (27394): wrapper (7.7.26015): starting
09:46:41 (27394): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:46:41] Arguments: --nthreads 8
[2026-01-09 09:46:41] Threads: 8
[2026-01-09 09:46:41] Checking for CVMFS
[2026-01-09 09:46:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:46:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:46:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:46:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:46:41] 2.11.2.0 4697 181163 135128 154946 2 60 16482111 18432001 194 130560 0 121946109 99.979 7067581 34190 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 09:46:41] CVMFS is ok
[2026-01-09 09:46:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:46:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:46:41] Further information can be found at the LHC@home message board.
[2026-01-09 09:46:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:46:41] Checking for apptainer binary...
[2026-01-09 09:46:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:46:41] Running /usr/bin/apptainer --version
[2026-01-09 09:46:41] apptainer version 1.3.2-1.el7
[2026-01-09 09:46:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:46:42] c-206-21.aglt2.org
[2026-01-09 09:46:42] apptainer works
[2026-01-09 09:46:42] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:46:42] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:46:42] Starting ATLAS job with PandaID=6963167756
[2026-01-09 09:46:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:11:26]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:11:26] 2026-01-09 19:10:20,889 | INFO     | right removable region: 253
[2026-01-09 14:11:26] 2026-01-09 19:10:20,889 | INFO     | sum of square deviations: 5081276667.5
[2026-01-09 14:11:26] 2026-01-09 19:10:20,891 | INFO     | sum of deviations: 6011124342.000001
[2026-01-09 14:11:26] 2026-01-09 19:10:20,891 | INFO     | mean x: 1767978061.5
[2026-01-09 14:11:26] 2026-01-09 19:10:20,891 | INFO     | mean y: 2487482.779527559
[2026-01-09 14:11:26] 2026-01-09 19:10:20,891 | INFO     | intersect: -2089021532.9720979
[2026-01-09 14:11:26] 2026-01-09 19:10:20,891 | INFO     | chi2: 0.016303111477176817
[2026-01-09 14:11:26] 2026-01-09 19:10:20,892 | INFO     | current chi2=0.016303111477176817 (change=98.72714907543637 %)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,892 | INFO     | sum of square deviations: 4787066500.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,893 | INFO     | sum of deviations: 3790901120.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,894 | INFO     | mean x: 1767978214.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,894 | INFO     | mean y: 2488614.4618473896
[2026-01-09 14:11:26] 2026-01-09 19:10:20,894 | INFO     | intersect: -1397581886.2483892
[2026-01-09 14:11:26] 2026-01-09 19:10:20,894 | INFO     | chi2: 0.004075669124964364
[2026-01-09 14:11:26] 2026-01-09 19:10:20,895 | INFO     | current chi2=0.004075669124964364 (change=75.00066701580242 %)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,895 | INFO     | sum of square deviations: 4504437945.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,896 | INFO     | sum of deviations: 4991290534.999996
[2026-01-09 14:11:26] 2026-01-09 19:10:20,896 | INFO     | mean x: 1767978366.5
[2026-01-09 14:11:26] 2026-01-09 19:10:20,897 | INFO     | mean y: 2487965.295081967
[2026-01-09 14:11:26] 2026-01-09 19:10:20,897 | INFO     | intersect: -1956578580.752364
[2026-01-09 14:11:26] 2026-01-09 19:10:20,897 | INFO     | chi2: 0.00281242752440081
[2026-01-09 14:11:26] 2026-01-09 19:10:20,897 | INFO     | current chi2=0.00281242752440081 (change=30.99470447259625 %)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,897 | INFO     | sum of square deviations: 4233158440.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,899 | INFO     | sum of deviations: 5964053386.999999
[2026-01-09 14:11:26] 2026-01-09 19:10:20,899 | INFO     | mean x: 1767978519.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,899 | INFO     | mean y: 2487426.5146443513
[2026-01-09 14:11:26] 2026-01-09 19:10:20,899 | INFO     | intersect: -2488399324.793722
[2026-01-09 14:11:26] 2026-01-09 19:10:20,900 | INFO     | chi2: 0.00026353630790303703
[2026-01-09 14:11:26] 2026-01-09 19:10:20,900 | INFO     | current chi2=0.00026353630790303703 (change=90.62957869610582 %)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,900 | INFO     | sum of square deviations: 3972995422.5
[2026-01-09 14:11:26] 2026-01-09 19:10:20,901 | INFO     | sum of deviations: 5282053501.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,902 | INFO     | mean x: 1767978671.5
[2026-01-09 14:11:26] 2026-01-09 19:10:20,902 | INFO     | mean y: 2487825.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,902 | INFO     | intersect: -2348020277.4265647
[2026-01-09 14:11:26] 2026-01-09 19:10:20,902 | INFO     | chi2: 0.0001724789993359139
[2026-01-09 14:11:26] 2026-01-09 19:10:20,902 | INFO     | current chi2=0.0001724789993359139 (change=34.552092382134255 %)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,903 | INFO     | sum of square deviations: 3723716330.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,904 | INFO     | sum of deviations: 4934854310.999999
[2026-01-09 14:11:26] 2026-01-09 19:10:20,904 | INFO     | mean x: 1767978824.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,904 | INFO     | mean y: 2488037.2401746726
[2026-01-09 14:11:26] 2026-01-09 19:10:20,904 | INFO     | intersect: -2340525540.6424103
[2026-01-09 14:11:26] 2026-01-09 19:10:20,905 | INFO     | chi2: 0.00017176507491351378
[2026-01-09 14:11:26] 2026-01-09 19:10:20,905 | INFO     | current chi2=0.00017176507491351378 (change=0.4139196221852553 %)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,905 | INFO     | left removable region: 60
[2026-01-09 14:11:26] 2026-01-09 19:10:20,905 | INFO     | sum of square deviations: 2229146912.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,906 | INFO     | sum of deviations: 2488955733.000002
[2026-01-09 14:11:26] 2026-01-09 19:10:20,906 | INFO     | mean x: 1767979556.0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,906 | INFO     | mean y: 2489245.8601036267
[2026-01-09 14:11:26] 2026-01-09 19:10:20,906 | INFO     | intersect: -1971549714.0866501
[2026-01-09 14:11:26] 2026-01-09 19:10:20,907 | INFO     | chi2: 0.00012806723605749616
[2026-01-09 14:11:26] 2026-01-09 19:10:20,907 | INFO     | current memory leak: 1.12 B/s (using 193 data points, chi2=0.00)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,907 | INFO     | could have reported an average CPU frequency of 2369 MHz (12 samples)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | ..............................
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | . Timing measurements:
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | . get job = 0 s
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | . initial setup = 2 s
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | . payload setup = 5 s
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | . stage-in = 0 s
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | . payload execution = 15771 s
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | . stage-out = 1 s
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | . log creation = 0 s
[2026-01-09 14:11:26] 2026-01-09 19:10:20,908 | INFO     | ..............................
[2026-01-09 14:11:26] 2026-01-09 19:10:20,992 | INFO     | 
[2026-01-09 14:11:26] 2026-01-09 19:10:20,992 | INFO     | job summary report
[2026-01-09 14:11:26] 2026-01-09 19:10:20,993 | INFO     | --------------------------------------------------
[2026-01-09 14:11:26] 2026-01-09 19:10:20,993 | INFO     | PanDA job id: 6963167756
[2026-01-09 14:11:26] 2026-01-09 19:10:20,993 | INFO     | task id: 47898826
[2026-01-09 14:11:26] 2026-01-09 19:10:20,993 | INFO     | errors: (none)
[2026-01-09 14:11:26] 2026-01-09 19:10:20,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:11:26] 2026-01-09 19:10:20,993 | INFO     | pilot state: finished 
[2026-01-09 14:11:26] 2026-01-09 19:10:20,994 | INFO     | transexitcode: 0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,994 | INFO     | exeerrorcode: 0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,994 | INFO     | exeerrordiag: 
[2026-01-09 14:11:26] 2026-01-09 19:10:20,994 | INFO     | exitcode: 0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,994 | INFO     | exitmsg: OK
[2026-01-09 14:11:26] 2026-01-09 19:10:20,994 | INFO     | cpuconsumptiontime: 121572 s
[2026-01-09 14:11:26] 2026-01-09 19:10:20,995 | INFO     | nevents: 400
[2026-01-09 14:11:26] 2026-01-09 19:10:20,995 | INFO     | neventsw: 0
[2026-01-09 14:11:26] 2026-01-09 19:10:20,995 | INFO     | pid: 29110
[2026-01-09 14:11:26] 2026-01-09 19:10:20,995 | INFO     | pgrp: 29110
[2026-01-09 14:11:26] 2026-01-09 19:10:20,995 | INFO     | corecount: 8
[2026-01-09 14:11:26] 2026-01-09 19:10:20,995 | INFO     | event service: False
[2026-01-09 14:11:26] 2026-01-09 19:10:20,996 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 12: 2284317, 15780: 2315554, 15784: 2324552, 15787: 2324736, 15791: 2324930}
[2026-01-09 14:11:26] 2026-01-09 19:10:20,996 | INFO     | --------------------------------------------------
[2026-01-09 14:11:26] 2026-01-09 19:10:20,996 | INFO     | 
[2026-01-09 14:11:26] 2026-01-09 19:10:20,996 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 14:11:26] 2026-01-09 19:10:21,019 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,020 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,020 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,020 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,021 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,021 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,023 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:11:26] 2026-01-09 19:10:21,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,023 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:11:26] 2026-01-09 19:10:21,023 | INFO     | job 6963167756 has completed (purged errors)
[2026-01-09 14:11:26] 2026-01-09 19:10:21,023 | INFO     | overall cleanup function is called
[2026-01-09 14:11:26] 2026-01-09 19:10:22,031 | INFO     | --- collectZombieJob: --- 10, [29110]
[2026-01-09 14:11:26] 2026-01-09 19:10:22,031 | INFO     | zombie collector waiting for pid 29110
[2026-01-09 14:11:26] 2026-01-09 19:10:22,032 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:11:26] 2026-01-09 19:10:22,032 | INFO     | collected zombie processes
[2026-01-09 14:11:26] 2026-01-09 19:10:22,032 | INFO     | will attempt to kill all subprocesses of pid=29110
[2026-01-09 14:11:26] 2026-01-09 19:10:22,150 | INFO     | process IDs to be killed: [29110] (in reverse order)
[2026-01-09 14:11:26] 2026-01-09 19:10:22,203 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:11:26] 2026-01-09 19:10:22,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:11:26] 2026-01-09 19:10:22,207 | INFO     | did not find any defunct processes belonging to 29110
[2026-01-09 14:11:26] 2026-01-09 19:10:22,211 | INFO     | did not find any defunct processes belonging to 29110
[2026-01-09 14:11:26] 2026-01-09 19:10:22,211 | INFO     | ready for new job
[2026-01-09 14:11:26] 2026-01-09 19:10:22,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:11:26] 2026-01-09 19:10:22,213 | INFO     | ***************************************
[2026-01-09 14:11:26] 2026-01-09 19:10:22,213 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:11:26] 2026-01-09 19:10:22,213 | INFO     | ***************************************
[2026-01-09 14:11:26] 2026-01-09 19:10:22,214 | INFO     | 
[2026-01-09 14:11:26] 2026-01-09 19:10:22,214 | INFO     | architecture information:
[2026-01-09 14:11:26] 2026-01-09 19:10:22,215 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:11:26] 2026-01-09 19:10:22,229 | INFO     | cat /etc/os-release:
[2026-01-09 14:11:26] NAME="CentOS Linux"
[2026-01-09 14:11:26] VERSION="7 (Core)"
[2026-01-09 14:11:26] ID="centos"
[2026-01-09 14:11:26] ID_LIKE="rhel fedora"
[2026-01-09 14:11:26] VERSION_ID="7"
[2026-01-09 14:11:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:11:26] ANSI_COLOR="0;31"
[2026-01-09 14:11:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:11:26] HOME_URL="https://www.centos.org/"
[2026-01-09 14:11:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:11:26] 
[2026-01-09 14:11:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:11:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:11:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:11:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:11:26] 
[2026-01-09 14:11:26] 2026-01-09 19:10:22,229 | INFO     | ***************************************
[2026-01-09 14:11:26] 2026-01-09 19:10:22,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 14:11:26] 2026-01-09 19:10:22,749 | INFO     | sufficient remaining disk space (28118614016 B)
[2026-01-09 14:11:26] 2026-01-09 19:10:22,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:11:26] 2026-01-09 19:10:22,750 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:11:26] 2026-01-09 19:10:22,750 | INFO     | update_server=False
[2026-01-09 14:11:26] 2026-01-09 19:10:22,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:11:26] 2026-01-09 19:10:22,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:11:26] 2026-01-09 19:10:22,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:11:26] 2026-01-09 19:10:22,838 | INFO     | all data control threads have been joined
[2026-01-09 14:11:26] 2026-01-09 19:10:22,912 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:11:26] 2026-01-09 19:10:22,912 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:11:26] 2026-01-09 19:10:22,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:11:26] 2026-01-09 19:10:22,912 | INFO     | will abort loop
[2026-01-09 14:11:26] 2026-01-09 19:10:23,026 | INFO     | all payload control threads have been joined
[2026-01-09 14:11:26] 2026-01-09 19:10:23,756 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:23,756 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:23,843 | INFO     | [data] control thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:23,917 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:23,918 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:23,932 | INFO     | all job control threads have been joined
[2026-01-09 14:11:26] 2026-01-09 19:10:24,032 | INFO     | [payload] control thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:24,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:11:26] 2026-01-09 19:10:24,192 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:24,211 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:24,386 | INFO     | [job] validate thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:24,402 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:24,446 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:24,819 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:24,938 | INFO     | [job] control thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:26,155 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:26,765 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:33,629 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:11:26] 2026-01-09 19:10:34,635 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:11:26] 2026-01-09 19:10:52,432 | INFO     | PID=4396 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 14:11:26] 2026-01-09 19:10:52,433 | INFO     | .. there are 3 such processes running
[2026-01-09 14:11:26] 2026-01-09 19:10:52,433 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:11:26] 2026-01-09 19:10:52,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:11:26] 2026-01-09 19:10:52,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:11:26] 2026-01-09 19:11:20,677 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:11:26] 2026-01-09 19:11:20,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906083473216)>', '<ExcThread(monitor, started 139905262937856)>']
[2026-01-09 14:11:26] 2026-01-09 19:11:21,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:11:26] 2026-01-09 19:11:21,559 | INFO     | [monitor] control thread has ended
[2026-01-09 14:11:26] 2026-01-09 19:11:25,816 | INFO     | all workflow threads have been joined
[2026-01-09 14:11:26] 2026-01-09 19:11:25,816 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:11:26] 2026-01-09 19:11:25,817 | INFO     | traces error code: 0
[2026-01-09 14:11:26] 2026-01-09 19:11:25,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:11:26] 2026-01-09 19:11:25,927 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:11:26] 2026-01-09 19:11:25,930 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:11:26] 2026-01-09 19:11:25,934 [wrapper] pilotpid: 4396
[2026-01-09 14:11:26] 2026-01-09 19:11:25,937 [wrapper] Pilot exit status: 0
[2026-01-09 14:11:26] 2026-01-09 19:11:25,949 [wrapper] pandaids: 6963167756
[2026-01-09 14:11:26] 2026-01-09 19:11:25,986 [wrapper] cleanup supervisor_pilot 17971 4397
[2026-01-09 14:11:26] 2026-01-09 19:11:25,989 [wrapper] Test setup, not cleaning
[2026-01-09 14:11:26] 2026-01-09 19:11:25,992 [wrapper] apfmon messages muted
[2026-01-09 14:11:26] 2026-01-09 19:11:25,996 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:11:26] 2026-01-09 19:11:25,999 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:11:26]  *** Error codes and diagnostics ***
[2026-01-09 14:11:26]     "exeErrorCode": 0,
[2026-01-09 14:11:26]     "exeErrorDiag": "",
[2026-01-09 14:11:26]     "pilotErrorCode": 0,
[2026-01-09 14:11:26]     "pilotErrorDiag": "",
[2026-01-09 14:11:26]  *** Listing of results directory ***
[2026-01-09 14:11:26] total 442328
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 14:11:26] -rwx------ 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas       100 Jan  9 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:11:26] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 09:46 run_atlas
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas       105 Jan  9 09:46 job.xml
[2026-01-09 14:11:26] -rw-r--r-- 2 boincer umatlas 225429864 Jan  9 09:46 EVNT.47898824._001337.pool.root.1
[2026-01-09 14:11:26] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:46 start_atlas.sh
[2026-01-09 14:11:26] drwxrwx--x 2 boincer umatlas      4096 Jan  9 09:46 shared
[2026-01-09 14:11:26] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 09:46 input.tar.gz
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas         0 Jan  9 09:46 boinc_lockfile
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 09:46 pandaJob.out
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas        57 Jan  9 09:46 setup.sh.local
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas    989377 Jan  9 09:46 agis_schedconf.cvmfs.json
[2026-01-09 14:11:26] drwx------ 5 boincer umatlas      4096 Jan  9 09:46 pilot3
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 14:04 init_data.xml
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas 218237917 Jan  9 14:09 HITS.47898826._035958.pool.root.1
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas        95 Jan  9 14:10 pilot_heartbeat.json
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas      1047 Jan  9 14:10 memory_monitor_summary.json
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas       532 Jan  9 14:10 boinc_task_state.xml
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas   1516240 Jan  9 14:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas    483134 Jan  9 14:10 log.47898826._035958.job.log.tgz.1
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas      7855 Jan  9 14:10 heartbeat.json
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas        29 Jan  9 14:11 wrapper_checkpoint.txt
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 14:11 boinc_mmap_file
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas      5078 Jan  9 14:11 pilotlog.txt
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas   2196761 Jan  9 14:11 log.47898826._035958.job.log.1
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas       357 Jan  9 14:11 output.list
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas       620 Jan  9 14:11 runtime_log
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas   2703360 Jan  9 14:11 result.tar.gz
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 14:11 runtime_log.err
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas       663 Jan  9 14:11 RDbNDmzzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhrlKDmcDhg5n.diag
[2026-01-09 14:11:26] -rw-r--r-- 1 boincer umatlas     20971 Jan  9 14:11 stderr.txt
[2026-01-09 14:11:26] HITS file was successfully produced:
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas 218237917 Jan  9 14:09 shared/HITS.pool.root.1
[2026-01-09 14:11:26]  *** Contents of shared directory: ***
[2026-01-09 14:11:26] total 436512
[2026-01-09 14:11:26] -rw-r--r-- 2 boincer umatlas 225429864 Jan  9 09:46 ATLAS.root_0
[2026-01-09 14:11:26] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 09:46 start_atlas.sh
[2026-01-09 14:11:26] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 09:46 input.tar.gz
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas 218237917 Jan  9 14:09 HITS.pool.root.1
[2026-01-09 14:11:26] -rw------- 1 boincer umatlas   2703360 Jan  9 14:11 result.tar.gz
14:11:28 (27394): run_atlas exited; CPU time 121803.169906
14:11:28 (27394): called boinc_finish(0)

</stderr_txt>
]]>

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