Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:22:51 (18571): wrapper (7.7.26015): starting
18:22:51 (18571): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:22:51] Arguments: --nthreads 8
[2026-01-09 18:22:51] Threads: 8
[2026-01-09 18:22:51] Checking for CVMFS
[2026-01-09 18:22:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:22:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:22:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:22:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:22:51] 2.11.2.0 27252 35706 94732 154951 3 56 20568824 25165824 0 130560 0 16952369 99.845 12441625 4435 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 18:22:51] CVMFS is ok
[2026-01-09 18:22:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:22:51] Checking for apptainer binary...
[2026-01-09 18:22:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:22:51] Running /usr/bin/apptainer --version
[2026-01-09 18:22:51] apptainer version 1.3.2-1.el7
[2026-01-09 18:22:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:22:53] cg-vwn496.simple-grid.lan
[2026-01-09 18:22:53] apptainer works
[2026-01-09 18:22:53] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:22:53] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:22:53] Starting ATLAS job with PandaID=6962318771
[2026-01-09 18:22:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:56:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:56:27] 2026-01-09 19:55:36,951 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:56:27] 2026-01-09 19:55:36,952 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 20:56:27] 2026-01-09 19:55:36,954 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6962318771/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:56:27] 2026-01-09 19:55:36,955 | INFO     | extracted standard info from prmon json
[2026-01-09 20:56:27] 2026-01-09 19:55:36,955 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:56:27] 2026-01-09 19:55:36,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:56:27] 2026-01-09 19:55:36,955 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:56:27] 2026-01-09 19:55:36,955 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:56:27] 2026-01-09 19:55:36,959 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:56:27] 2026-01-09 19:55:36,959 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 20:56:27] 2026-01-09 19:55:36,960 | INFO     | sum of deviations: -19626420996.499992
[2026-01-09 20:56:27] 2026-01-09 19:55:36,961 | INFO     | mean x: 1767983960.5
[2026-01-09 20:56:27] 2026-01-09 19:55:36,961 | INFO     | mean y: 2542866.9133333336
[2026-01-09 20:56:27] 2026-01-09 19:55:36,961 | INFO     | intersect: 33160405834.630447
[2026-01-09 20:56:27] 2026-01-09 19:55:36,961 | INFO     | chi2: 2.4152395906231083
[2026-01-09 20:56:27] 2026-01-09 19:55:36,962 | INFO     | sum of square deviations: 945282840.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,962 | INFO     | sum of deviations: -8676426865.999998
[2026-01-09 20:56:27] 2026-01-09 19:55:36,963 | INFO     | mean x: 1767983808.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,963 | INFO     | mean y: 2558965.8413793105
[2026-01-09 20:56:27] 2026-01-09 19:55:36,963 | INFO     | intersect: 16230275752.051296
[2026-01-09 20:56:27] 2026-01-09 19:55:36,963 | INFO     | chi2: 1.660333508884353
[2026-01-09 20:56:27] 2026-01-09 19:55:36,963 | INFO     | current chi2=1.660333508884353 (change=31.255950120625382 %)
[2026-01-09 20:56:27] 2026-01-09 19:55:36,964 | INFO     | sum of square deviations: 850825255.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,964 | INFO     | sum of deviations: -7797596694.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,965 | INFO     | mean x: 1767983655.5
[2026-01-09 20:56:27] 2026-01-09 19:55:36,965 | INFO     | mean y: 2560385.285714286
[2026-01-09 20:56:27] 2026-01-09 19:55:36,965 | INFO     | intersect: 16205680151.838526
[2026-01-09 20:56:27] 2026-01-09 19:55:36,965 | INFO     | chi2: 1.6603775169861694
[2026-01-09 20:56:27] 2026-01-09 19:55:36,965 | INFO     | current chi2=1.6603775169861694 (change=-0.002650557950014201 %)
[2026-01-09 20:56:27] 2026-01-09 19:55:36,965 | INFO     | right removable region: 139
[2026-01-09 20:56:27] 2026-01-09 19:55:36,966 | INFO     | sum of square deviations: 945282840.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,967 | INFO     | sum of deviations: -42284860352.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,967 | INFO     | mean x: 1767984113.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,967 | INFO     | mean y: 2576487.1862068963
[2026-01-09 20:56:27] 2026-01-09 19:55:36,967 | INFO     | intersect: 79088917801.45316
[2026-01-09 20:56:27] 2026-01-09 19:55:36,967 | INFO     | chi2: 0.9547046817941591
[2026-01-09 20:56:27] 2026-01-09 19:55:36,968 | INFO     | current chi2=0.9547046817941591 (change=60.47163662351798 %)
[2026-01-09 20:56:27] 2026-01-09 19:55:36,968 | INFO     | sum of square deviations: 850825255.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,969 | INFO     | sum of deviations: -41761485628.5
[2026-01-09 20:56:27] 2026-01-09 19:55:36,969 | INFO     | mean x: 1767984265.5
[2026-01-09 20:56:27] 2026-01-09 19:55:36,969 | INFO     | mean y: 2575548.3785714284
[2026-01-09 20:56:27] 2026-01-09 19:55:36,969 | INFO     | intersect: 86781440022.83798
[2026-01-09 20:56:27] 2026-01-09 19:55:36,969 | INFO     | chi2: 0.9268941217312447
[2026-01-09 20:56:27] 2026-01-09 19:55:36,970 | INFO     | current chi2=0.9268941217312447 (change=2.913001328395133 %)
[2026-01-09 20:56:27] 2026-01-09 19:55:36,970 | INFO     | left removable region: 20
[2026-01-09 20:56:27] 2026-01-09 19:55:36,970 | INFO     | sum of square deviations: 522502820.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,971 | INFO     | sum of deviations: -22138223578.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,971 | INFO     | mean x: 1767984235.0
[2026-01-09 20:56:27] 2026-01-09 19:55:36,971 | INFO     | mean y: 2582855.655462185
[2026-01-09 20:56:27] 2026-01-09 19:55:36,971 | INFO     | intersect: 74911327418.62125
[2026-01-09 20:56:27] 2026-01-09 19:55:36,971 | INFO     | chi2: 0.126702304926656
[2026-01-09 20:56:27] 2026-01-09 19:55:36,972 | INFO     | current memory leak: -42.37 B/s (using 119 data points, chi2=0.13)
[2026-01-09 20:56:27] 2026-01-09 19:55:36,972 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 20:56:27] 2026-01-09 19:55:36,972 | INFO     | ..............................
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | . Timing measurements:
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | . get job = 0 s
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | . initial setup = 1 s
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | . payload setup = 6 s
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | . stage-in = 0 s
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | . payload execution = 9113 s
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | . stage-out = 0 s
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | . log creation = 0 s
[2026-01-09 20:56:27] 2026-01-09 19:55:36,973 | INFO     | ..............................
[2026-01-09 20:56:27] 2026-01-09 19:55:37,083 | INFO     | 
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | job summary report
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | --------------------------------------------------
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | PanDA job id: 6962318771
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | task id: 47898826
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | errors: (none)
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | pilot state: finished 
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | transexitcode: 0
[2026-01-09 20:56:27] 2026-01-09 19:55:37,084 | INFO     | exeerrorcode: 0
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | exeerrordiag: 
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | exitcode: 0
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | exitmsg: OK
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | cpuconsumptiontime: 69097 s
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | nevents: 400
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | neventsw: 0
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | pid: 28786
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | pgrp: 28786
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | corecount: 8
[2026-01-09 20:56:27] 2026-01-09 19:55:37,085 | INFO     | event service: False
[2026-01-09 20:56:27] 2026-01-09 19:55:37,086 | INFO     | sizes: {0: 2283141, 1: 2283998, 6: 2284260, 12: 2284288, 9124: 2312167, 9126: 2321167, 9128: 2321351, 9135: 2321545}
[2026-01-09 20:56:27] 2026-01-09 19:55:37,086 | INFO     | --------------------------------------------------
[2026-01-09 20:56:27] 2026-01-09 19:55:37,086 | INFO     | 
[2026-01-09 20:56:27] 2026-01-09 19:55:37,086 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-09 20:56:27] 2026-01-09 19:55:37,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,111 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:56:27] 2026-01-09 19:55:37,113 | INFO     | job 6962318771 has completed (purged errors)
[2026-01-09 20:56:27] 2026-01-09 19:55:37,114 | INFO     | overall cleanup function is called
[2026-01-09 20:56:27] 2026-01-09 19:55:38,122 | INFO     | --- collectZombieJob: --- 10, [28786]
[2026-01-09 20:56:27] 2026-01-09 19:55:38,122 | INFO     | zombie collector waiting for pid 28786
[2026-01-09 20:56:27] 2026-01-09 19:55:38,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:56:27] 2026-01-09 19:55:38,122 | INFO     | collected zombie processes
[2026-01-09 20:56:27] 2026-01-09 19:55:38,122 | INFO     | will attempt to kill all subprocesses of pid=28786
[2026-01-09 20:56:27] 2026-01-09 19:55:38,180 | INFO     | process IDs to be killed: [28786] (in reverse order)
[2026-01-09 20:56:27] 2026-01-09 19:55:38,281 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:56:27] 2026-01-09 19:55:38,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:56:27] 2026-01-09 19:55:38,283 | INFO     | did not find any defunct processes belonging to 28786
[2026-01-09 20:56:27] 2026-01-09 19:55:38,285 | INFO     | did not find any defunct processes belonging to 28786
[2026-01-09 20:56:27] 2026-01-09 19:55:38,285 | INFO     | ready for new job
[2026-01-09 20:56:27] 2026-01-09 19:55:38,285 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:56:27] 2026-01-09 19:55:38,287 | INFO     | ***************************************
[2026-01-09 20:56:27] 2026-01-09 19:55:38,287 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:56:27] 2026-01-09 19:55:38,287 | INFO     | ***************************************
[2026-01-09 20:56:27] 2026-01-09 19:55:38,287 | INFO     | 
[2026-01-09 20:56:27] 2026-01-09 19:55:38,288 | INFO     | pilot is running in a VM
[2026-01-09 20:56:27] 2026-01-09 19:55:38,288 | INFO     | architecture information:
[2026-01-09 20:56:27] 2026-01-09 19:55:38,288 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:56:27] 2026-01-09 19:55:38,319 | INFO     | cat /etc/os-release:
[2026-01-09 20:56:27] NAME="CentOS Linux"
[2026-01-09 20:56:27] VERSION="7 (Core)"
[2026-01-09 20:56:27] ID="centos"
[2026-01-09 20:56:27] ID_LIKE="rhel fedora"
[2026-01-09 20:56:27] VERSION_ID="7"
[2026-01-09 20:56:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:56:27] ANSI_COLOR="0;31"
[2026-01-09 20:56:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:56:27] HOME_URL="https://www.centos.org/"
[2026-01-09 20:56:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:56:27] 
[2026-01-09 20:56:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:56:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:56:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:56:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:56:27] 
[2026-01-09 20:56:27] 2026-01-09 19:55:38,319 | INFO     | ***************************************
[2026-01-09 20:56:27] 2026-01-09 19:55:38,822 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-09 20:56:27] 2026-01-09 19:55:38,843 | INFO     | sufficient remaining disk space (499217596416 B)
[2026-01-09 20:56:27] 2026-01-09 19:55:38,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:56:27] 2026-01-09 19:55:38,843 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:56:27] 2026-01-09 19:55:38,843 | INFO     | update_server=False
[2026-01-09 20:56:27] 2026-01-09 19:55:38,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:56:27] 2026-01-09 19:55:38,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:56:27] 2026-01-09 19:55:38,863 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:56:27] 2026-01-09 19:55:38,863 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:56:27] 2026-01-09 19:55:38,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:56:27] 2026-01-09 19:55:38,864 | INFO     | will abort loop
[2026-01-09 20:56:27] 2026-01-09 19:55:39,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:56:27] 2026-01-09 19:55:39,301 | INFO     | all payload control threads have been joined
[2026-01-09 20:56:27] 2026-01-09 19:55:39,613 | INFO     | all job control threads have been joined
[2026-01-09 20:56:27] 2026-01-09 19:55:39,849 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:39,850 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:39,864 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:39,869 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:39,901 | INFO     | all data control threads have been joined
[2026-01-09 20:56:27] 2026-01-09 19:55:40,192 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:40,261 | INFO     | [job] validate thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:40,307 | INFO     | [payload] control thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:40,402 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:40,619 | INFO     | [job] control thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:40,664 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:40,724 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:40,906 | INFO     | [data] control thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:41,018 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:41,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:56:27] 2026-01-09 19:55:41,211 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:41,256 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:55:45,177 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:56:27] 2026-01-09 19:56:09,152 | INFO     | PID=22306 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 20:56:27] 2026-01-09 19:56:09,153 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:56:27] 2026-01-09 19:56:09,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:56:27] 2026-01-09 19:56:09,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:56:27] 2026-01-09 19:56:21,557 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:56:27] 2026-01-09 19:56:21,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054351877952)>', '<ExcThread(monitor, started 140053774853888)>']
[2026-01-09 20:56:27] 2026-01-09 19:56:22,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:56:27] 2026-01-09 19:56:22,221 | INFO     | [monitor] control thread has ended
[2026-01-09 20:56:27] 2026-01-09 19:56:26,749 | INFO     | all workflow threads have been joined
[2026-01-09 20:56:27] 2026-01-09 19:56:26,750 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:56:27] 2026-01-09 19:56:26,750 | INFO     | traces error code: 0
[2026-01-09 20:56:27] 2026-01-09 19:56:26,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:56:27] 2026-01-09 19:56:26,900 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:56:27] 2026-01-09 19:56:26,908 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:56:27] 2026-01-09 19:56:26,912 [wrapper] pilotpid: 22306
[2026-01-09 20:56:27] 2026-01-09 19:56:26,916 [wrapper] Pilot exit status: 0
[2026-01-09 20:56:27] 2026-01-09 19:56:26,932 [wrapper] pandaids: 6962318771
[2026-01-09 20:56:27] 2026-01-09 19:56:26,969 [wrapper] cleanup supervisor_pilot 13150 22307
[2026-01-09 20:56:27] 2026-01-09 19:56:26,974 [wrapper] Test setup, not cleaning
[2026-01-09 20:56:27] 2026-01-09 19:56:26,979 [wrapper] apfmon messages muted
[2026-01-09 20:56:27] 2026-01-09 19:56:26,987 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:56:27] 2026-01-09 19:56:26,991 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:56:27]  *** Error codes and diagnostics ***
[2026-01-09 20:56:27]     "exeErrorCode": 0,
[2026-01-09 20:56:27]     "exeErrorDiag": "",
[2026-01-09 20:56:27]     "pilotErrorCode": 0,
[2026-01-09 20:56:27]     "pilotErrorDiag": "",
[2026-01-09 20:56:27]  *** Listing of results directory ***
[2026-01-09 20:56:27] total 439412
[2026-01-09 20:56:27] -rwx------. 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc       100 Jan  9 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:56:27] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 18:22 run_atlas
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc       105 Jan  9 18:22 job.xml
[2026-01-09 20:56:27] -rw-r--r--. 2 boinc boinc 226641822 Jan  9 18:22 EVNT.47898824._000562.pool.root.1
[2026-01-09 20:56:27] -rw-r--r--. 2 boinc boinc     15847 Jan  9 18:22 start_atlas.sh
[2026-01-09 20:56:27] drwxrwx--x. 2 boinc boinc        68 Jan  9 18:22 shared
[2026-01-09 20:56:27] -rw-r--r--. 2 boinc boinc    592401 Jan  9 18:22 input.tar.gz
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc      6392 Jan  9 18:22 init_data.xml
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc         0 Jan  9 18:22 boinc_lockfile
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc      2519 Jan  9 18:22 pandaJob.out
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc    989356 Jan  9 18:23 agis_schedconf.cvmfs.json
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc   1516240 Jan  9 18:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:56:27] drwx------. 5 boinc boinc      4096 Jan  9 18:23 pilot3
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc 216196356 Jan  9 20:54 HITS.47898826._013100.pool.root.1
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc       530 Jan  9 20:55 boinc_task_state.xml
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc      1027 Jan  9 20:55 memory_monitor_summary.json
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc    379447 Jan  9 20:55 log.47898826._013100.job.log.tgz.1
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc      7769 Jan  9 20:55 heartbeat.json
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc      8192 Jan  9 20:56 boinc_mmap_file
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc        27 Jan  9 20:56 wrapper_checkpoint.txt
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc        95 Jan  9 20:56 pilot_heartbeat.json
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc      4996 Jan  9 20:56 pilotlog.txt
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc   1230511 Jan  9 20:56 log.47898826._013100.job.log.1
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc       357 Jan  9 20:56 output.list
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc       620 Jan  9 20:56 runtime_log
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc   1628160 Jan  9 20:56 result.tar.gz
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc       652 Jan  9 20:56 XqwNDmgnpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5oiKDm7MOrVm.diag
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc      8832 Jan  9 20:56 runtime_log.err
[2026-01-09 20:56:27] -rw-r--r--. 1 boinc boinc     20727 Jan  9 20:56 stderr.txt
[2026-01-09 20:56:27] HITS file was successfully produced:
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc 216196356 Jan  9 20:54 shared/HITS.pool.root.1
[2026-01-09 20:56:27]  *** Contents of shared directory: ***
[2026-01-09 20:56:27] total 434652
[2026-01-09 20:56:27] -rw-r--r--. 2 boinc boinc 226641822 Jan  9 18:22 ATLAS.root_0
[2026-01-09 20:56:27] -rw-r--r--. 2 boinc boinc     15847 Jan  9 18:22 start_atlas.sh
[2026-01-09 20:56:27] -rw-r--r--. 2 boinc boinc    592401 Jan  9 18:22 input.tar.gz
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc 216196356 Jan  9 20:54 HITS.pool.root.1
[2026-01-09 20:56:27] -rw-------. 1 boinc boinc   1628160 Jan  9 20:56 result.tar.gz
20:56:28 (18571): run_atlas exited; CPU time 69153.349160
20:56:28 (18571): called boinc_finish(0)

</stderr_txt>
]]>

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