Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:51:24 (2076304): wrapper (7.7.26015): starting
14:51:24 (2076304): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 14:51:24] Arguments: --nthreads 9
[2026-01-09 14:51:24] Threads: 9
[2026-01-09 14:51:24] Checking for CVMFS
[2026-01-09 14:51:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:51:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:51:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:51:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:51:26] 2.13.3.0 12275 93851 359192 154955 1 187 34404869 40960000 15975 16776704 25 436831547 99.628 431450770 37153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 14:51:26] CVMFS is ok
[2026-01-09 14:51:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:51:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:51:26] Further information can be found at the LHC@home message board.
[2026-01-09 14:51:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:51:26] Checking for apptainer binary...
[2026-01-09 14:51:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:51:26] Running /usr/bin/apptainer --version
[2026-01-09 14:51:26] apptainer version 1.4.5-2.el9
[2026-01-09 14:51:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:51:27] c7-11-11.aglt2.org
[2026-01-09 14:51:27] apptainer works
[2026-01-09 14:51:27] Set ATHENA_PROC_NUMBER=9
[2026-01-09 14:51:27] Set ATHENA_CORE_NUMBER=9
[2026-01-09 14:51:27] Starting ATLAS job with PandaID=6963167609
[2026-01-09 14:51:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:04:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:04:50] 2026-01-10 01:03:52,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:04:50] 2026-01-10 01:03:52,213 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:04:50] 2026-01-10 01:03:52,215 | INFO     | sum of square deviations: 8799522803.79014
[2026-01-09 20:04:50] 2026-01-10 01:03:52,217 | INFO     | sum of deviations: 85619155114.35416
[2026-01-09 20:04:50] 2026-01-10 01:03:52,217 | INFO     | mean x: 1767997677.0262296
[2026-01-09 20:04:50] 2026-01-10 01:03:52,217 | INFO     | mean y: 2563226.455737705
[2026-01-09 20:04:50] 2026-01-10 01:03:52,217 | INFO     | intersect: -17200013632.135548
[2026-01-09 20:04:50] 2026-01-10 01:03:52,217 | INFO     | chi2: 2.318195105313091
[2026-01-09 20:04:50] 2026-01-10 01:03:52,218 | INFO     | sum of square deviations: 8373768282.996669
[2026-01-09 20:04:50] 2026-01-10 01:03:52,230 | INFO     | sum of deviations: 83582524179.71005
[2026-01-09 20:04:50] 2026-01-10 01:03:52,230 | INFO     | mean x: 1767997524.5033333
[2026-01-09 20:04:50] 2026-01-10 01:03:52,230 | INFO     | mean y: 2562496.79
[2026-01-09 20:04:50] 2026-01-10 01:03:52,230 | INFO     | intersect: -17644653290.340008
[2026-01-09 20:04:50] 2026-01-10 01:03:52,230 | INFO     | chi2: 2.3190552223893315
[2026-01-09 20:04:50] 2026-01-10 01:03:52,230 | INFO     | current chi2=2.3190552223893315 (change=-0.037102876900622105 %)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,246 | INFO     | right removable region: 299
[2026-01-09 20:04:50] 2026-01-10 01:03:52,246 | INFO     | sum of square deviations: 8373819110.519995
[2026-01-09 20:04:50] 2026-01-10 01:03:52,248 | INFO     | sum of deviations: 14906123524.140001
[2026-01-09 20:04:50] 2026-01-10 01:03:52,248 | INFO     | mean x: 1767997829.54
[2026-01-09 20:04:50] 2026-01-10 01:03:52,248 | INFO     | mean y: 2588466.8633333333
[2026-01-09 20:04:50] 2026-01-10 01:03:52,248 | INFO     | intersect: -3144600848.99211
[2026-01-09 20:04:50] 2026-01-10 01:03:52,248 | INFO     | chi2: 0.20470986268064037
[2026-01-09 20:04:50] 2026-01-10 01:03:52,248 | INFO     | current chi2=0.20470986268064037 (change=91.16942908681568 %)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,249 | INFO     | sum of square deviations: 7962051110.0202875
[2026-01-09 20:04:50] 2026-01-10 01:03:52,272 | INFO     | sum of deviations: -6217286688.203386
[2026-01-09 20:04:50] 2026-01-10 01:03:52,272 | INFO     | mean x: 1767997982.0576272
[2026-01-09 20:04:50] 2026-01-10 01:03:52,272 | INFO     | mean y: 2596292.4237288134
[2026-01-09 20:04:50] 2026-01-10 01:03:52,272 | INFO     | intersect: 1383163958.5598643
[2026-01-09 20:04:50] 2026-01-10 01:03:52,272 | INFO     | chi2: 0.04333402775374454
[2026-01-09 20:04:50] 2026-01-10 01:03:52,272 | INFO     | current chi2=0.04333402775374454 (change=78.83148999941044 %)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,273 | INFO     | sum of square deviations: 7564004296.831051
[2026-01-09 20:04:50] 2026-01-10 01:03:52,274 | INFO     | sum of deviations: -9758552751.768967
[2026-01-09 20:04:50] 2026-01-10 01:03:52,279 | INFO     | mean x: 1767998134.5758622
[2026-01-09 20:04:50] 2026-01-10 01:03:52,279 | INFO     | mean y: 2597632.375862069
[2026-01-09 20:04:50] 2026-01-10 01:03:52,279 | INFO     | intersect: 2283545974.5807824
[2026-01-09 20:04:50] 2026-01-10 01:03:52,279 | INFO     | chi2: 0.0257676333189326
[2026-01-09 20:04:50] 2026-01-10 01:03:52,279 | INFO     | current chi2=0.0257676333189326 (change=40.537183699232784 %)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,280 | INFO     | sum of square deviations: 7179446108.442113
[2026-01-09 20:04:50] 2026-01-10 01:03:52,281 | INFO     | sum of deviations: -9601202444.305264
[2026-01-09 20:04:50] 2026-01-10 01:03:52,281 | INFO     | mean x: 1767998287.0947368
[2026-01-09 20:04:50] 2026-01-10 01:03:52,281 | INFO     | mean y: 2597569.863157895
[2026-01-09 20:04:50] 2026-01-10 01:03:52,281 | INFO     | intersect: 2366973486.7770233
[2026-01-09 20:04:50] 2026-01-10 01:03:52,282 | INFO     | chi2: 0.025716022292115823
[2026-01-09 20:04:50] 2026-01-10 01:03:52,282 | INFO     | current chi2=0.025716022292115823 (change=0.20029401295018084 %)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,282 | INFO     | left removable region: 40
[2026-01-09 20:04:50] 2026-01-10 01:03:52,282 | INFO     | sum of square deviations: 5388300386.046315
[2026-01-09 20:04:50] 2026-01-10 01:03:52,285 | INFO     | sum of deviations: -3306945085.4478655
[2026-01-09 20:04:50] 2026-01-10 01:03:52,286 | INFO     | mean x: 1767998714.123552
[2026-01-09 20:04:50] 2026-01-10 01:03:52,286 | INFO     | mean y: 2594178.138996139
[2026-01-09 20:04:50] 2026-01-10 01:03:52,286 | INFO     | intersect: 1087662611.571128
[2026-01-09 20:04:50] 2026-01-10 01:03:52,286 | INFO     | chi2: 0.016868458453109816
[2026-01-09 20:04:50] 2026-01-10 01:03:52,286 | INFO     | current memory leak: -0.61 B/s (using 259 data points, chi2=0.02)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | could have reported an average CPU frequency of 3290 MHz (14 samples)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | ..............................
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | . Timing measurements:
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | . get job = 0 s
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | . initial setup = 8 s
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | . payload setup = 20 s
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | . stage-in = 0 s
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | . payload execution = 18618 s
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | . stage-out = 2 s
[2026-01-09 20:04:50] 2026-01-10 01:03:52,287 | INFO     | . log creation = 0 s
[2026-01-09 20:04:50] 2026-01-10 01:03:52,288 | INFO     | ..............................
[2026-01-09 20:04:50] 2026-01-10 01:03:52,574 | INFO     | 
[2026-01-09 20:04:50] 2026-01-10 01:03:52,581 | INFO     | job summary report
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | --------------------------------------------------
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | PanDA job id: 6963167609
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | task id: 47898826
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | errors: (none)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | pilot state: finished 
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | transexitcode: 0
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | exeerrorcode: 0
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | exeerrordiag: 
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | exitcode: 0
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | exitmsg: OK
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | cpuconsumptiontime: 46939 s
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | nevents: 400
[2026-01-09 20:04:50] 2026-01-10 01:03:52,582 | INFO     | neventsw: 0
[2026-01-09 20:04:50] 2026-01-10 01:03:52,583 | INFO     | pid: 2089915
[2026-01-09 20:04:50] 2026-01-10 01:03:52,583 | INFO     | pgrp: 2089915
[2026-01-09 20:04:50] 2026-01-10 01:03:52,583 | INFO     | corecount: 9
[2026-01-09 20:04:50] 2026-01-10 01:03:52,583 | INFO     | event service: False
[2026-01-09 20:04:50] 2026-01-10 01:03:52,583 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2283854, 3: 2284053, 14: 2284053, 19: 2284343, 24: 2284499, 18642: 2317181, 18643: 2317180, 18646: 2326550, 18648: 2326606, 1866
[2026-01-09 20:04:50] 2026-01-10 01:03:52,583 | INFO     | --------------------------------------------------
[2026-01-09 20:04:50] 2026-01-10 01:03:52,583 | INFO     | 
[2026-01-09 20:04:50] 2026-01-10 01:03:52,583 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 20:04:50] 2026-01-10 01:03:52,628 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,629 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,629 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,629 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,631 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,631 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:04:50] 2026-01-10 01:03:52,631 | INFO     | job 6963167609 has completed (purged errors)
[2026-01-09 20:04:50] 2026-01-10 01:03:52,631 | INFO     | overall cleanup function is called
[2026-01-09 20:04:50] 2026-01-10 01:03:52,896 | INFO     | PID=2082427 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:04:50] 2026-01-10 01:03:52,896 | INFO     | .. there are 16 such processes running
[2026-01-09 20:04:50] 2026-01-10 01:03:53,636 | INFO     | --- collectZombieJob: --- 10, [2089915]
[2026-01-09 20:04:50] 2026-01-10 01:03:53,636 | INFO     | zombie collector waiting for pid 2089915
[2026-01-09 20:04:50] 2026-01-10 01:03:53,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:04:50] 2026-01-10 01:03:53,636 | INFO     | collected zombie processes
[2026-01-09 20:04:50] 2026-01-10 01:03:53,636 | INFO     | will attempt to kill all subprocesses of pid=2089915
[2026-01-09 20:04:50] 2026-01-10 01:03:53,969 | INFO     | process IDs to be killed: [2089915] (in reverse order)
[2026-01-09 20:04:50] 2026-01-10 01:03:54,066 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:04:50] 2026-01-10 01:03:54,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:04:50] 2026-01-10 01:03:54,080 | INFO     | did not find any defunct processes belonging to 2089915
[2026-01-09 20:04:50] 2026-01-10 01:03:54,092 | INFO     | did not find any defunct processes belonging to 2089915
[2026-01-09 20:04:50] 2026-01-10 01:03:54,092 | INFO     | ready for new job
[2026-01-09 20:04:50] 2026-01-10 01:03:54,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:04:50] 2026-01-10 01:03:54,096 | INFO     | ***************************************
[2026-01-09 20:04:50] 2026-01-10 01:03:54,096 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:04:50] 2026-01-10 01:03:54,096 | INFO     | ***************************************
[2026-01-09 20:04:50] 2026-01-10 01:03:54,096 | INFO     | 
[2026-01-09 20:04:50] 2026-01-10 01:03:54,106 | INFO     | architecture information:
[2026-01-09 20:04:50] 2026-01-10 01:03:54,109 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:04:50] 2026-01-10 01:03:54,156 | INFO     | cat /etc/os-release:
[2026-01-09 20:04:50] NAME="CentOS Linux"
[2026-01-09 20:04:50] VERSION="7 (Core)"
[2026-01-09 20:04:50] ID="centos"
[2026-01-09 20:04:50] ID_LIKE="rhel fedora"
[2026-01-09 20:04:50] VERSION_ID="7"
[2026-01-09 20:04:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:04:50] ANSI_COLOR="0;31"
[2026-01-09 20:04:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:04:50] HOME_URL="https://www.centos.org/"
[2026-01-09 20:04:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:04:50] 
[2026-01-09 20:04:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:04:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:04:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:04:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:04:50] 
[2026-01-09 20:04:50] 2026-01-10 01:03:54,157 | INFO     | ***************************************
[2026-01-09 20:04:50] 2026-01-10 01:03:54,660 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 20:04:50] 2026-01-10 01:03:54,679 | INFO     | sufficient remaining disk space (84426096640 B)
[2026-01-09 20:04:50] 2026-01-10 01:03:54,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:04:50] 2026-01-10 01:03:54,679 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:04:50] 2026-01-10 01:03:54,679 | INFO     | update_server=False
[2026-01-09 20:04:50] 2026-01-10 01:03:54,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:04:50] 2026-01-10 01:03:54,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:04:50] 2026-01-10 01:03:55,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:04:50] 2026-01-10 01:03:55,201 | INFO     | aborting loop
[2026-01-09 20:04:50] 2026-01-10 01:03:55,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:04:50] 2026-01-10 01:03:55,685 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:55,731 | INFO     | all data control threads have been joined
[2026-01-09 20:04:50] 2026-01-10 01:03:55,756 | INFO     | [job] validate thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:55,779 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:55,816 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:55,889 | INFO     | all payload control threads have been joined
[2026-01-09 20:04:50] 2026-01-10 01:03:55,988 | INFO     | all job control threads have been joined
[2026-01-09 20:04:50] 2026-01-10 01:03:56,107 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,207 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,455 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,629 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,688 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,737 | INFO     | [data] control thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,895 | INFO     | [payload] control thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,945 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,960 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:56,993 | INFO     | [job] control thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:57,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:04:50] 2026-01-10 01:03:58,382 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:03:59,596 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:04:50] 2026-01-10 01:04:25,426 | INFO     | PID=2082427 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:04:50] 2026-01-10 01:04:25,426 | INFO     | .. there are 15 such processes running
[2026-01-09 20:04:50] 2026-01-10 01:04:25,427 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:04:50] 2026-01-10 01:04:25,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:04:50] 2026-01-10 01:04:25,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:04:50] 2026-01-10 01:04:44,459 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:04:50] 2026-01-10 01:04:44,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629355775808)>', '<ExcThread(monitor, started 139629000890112)>']
[2026-01-09 20:04:50] 2026-01-10 01:04:45,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:04:50] 2026-01-10 01:04:45,536 | INFO     | [monitor] control thread has ended
[2026-01-09 20:04:50] 2026-01-10 01:04:49,737 | INFO     | all workflow threads have been joined
[2026-01-09 20:04:50] 2026-01-10 01:04:49,737 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:04:50] 2026-01-10 01:04:49,737 | INFO     | traces error code: 0
[2026-01-09 20:04:50] 2026-01-10 01:04:49,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:04:50] 2026-01-10 01:04:49,912 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:04:50] 2026-01-10 01:04:49,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:04:50] 2026-01-10 01:04:49,979 [wrapper] pilotpid: 2082427
[2026-01-09 20:04:50] 2026-01-10 01:04:50,008 [wrapper] Pilot exit status: 0
[2026-01-09 20:04:50] 2026-01-10 01:04:50,152 [wrapper] pandaids: 6963167609
[2026-01-09 20:04:50] 2026-01-10 01:04:50,384 [wrapper] cleanup supervisor_pilot 3125627 2082428
[2026-01-09 20:04:50] 2026-01-10 01:04:50,399 [wrapper] Test setup, not cleaning
[2026-01-09 20:04:50] 2026-01-10 01:04:50,408 [wrapper] apfmon messages muted
[2026-01-09 20:04:50] 2026-01-10 01:04:50,412 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:04:50] 2026-01-10 01:04:50,414 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:04:50]  *** Error codes and diagnostics ***
[2026-01-09 20:04:50]     "exeErrorCode": 0,
[2026-01-09 20:04:50]     "exeErrorDiag": "",
[2026-01-09 20:04:50]     "pilotErrorCode": 0,
[2026-01-09 20:04:50]     "pilotErrorDiag": "",
[2026-01-09 20:04:50]  *** Listing of results directory ***
[2026-01-09 20:04:50] total 443364
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 20:04:50] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:59 queuedata.json
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas       100 Jan  9 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:04:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 14:51 run_atlas
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas       105 Jan  9 14:51 job.xml
[2026-01-09 20:04:50] -rw-r--r--. 2 boincer umatlas 224489145 Jan  9 14:51 EVNT.47898824._001333.pool.root.1
[2026-01-09 20:04:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:51 start_atlas.sh
[2026-01-09 20:04:50] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 14:51 shared
[2026-01-09 20:04:50] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 14:51 input.tar.gz
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas         0 Jan  9 14:51 boinc_lockfile
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 14:51 pandaJob.out
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas        57 Jan  9 14:51 setup.sh.local
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas    989364 Jan  9 14:52 agis_schedconf.cvmfs.json
[2026-01-09 20:04:50] drwx------. 5 boincer umatlas      4096 Jan  9 14:52 pilot3
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas 219677403 Jan  9 20:02 HITS.47898826._035850.pool.root.1
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas       531 Jan  9 20:02 boinc_task_state.xml
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas      1033 Jan  9 20:03 memory_monitor_summary.json
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas    517486 Jan  9 20:03 log.47898826._035850.job.log.tgz.1
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas      7776 Jan  9 20:03 heartbeat.json
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas      6902 Jan  9 20:04 init_data.xml
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:04 boinc_mmap_file
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas        28 Jan  9 20:04 wrapper_checkpoint.txt
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas        95 Jan  9 20:04 pilot_heartbeat.json
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas      4824 Jan  9 20:04 pilotlog.txt
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas   2442311 Jan  9 20:04 log.47898826._035850.job.log.1
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas       357 Jan  9 20:04 output.list
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:04 runtime_log
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas   2979840 Jan  9 20:04 result.tar.gz
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas       656 Jan  9 20:04 TPYMDmpzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7bgKDmoi0yZm.diag
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 20:04 runtime_log.err
[2026-01-09 20:04:50] -rw-r--r--. 1 boincer umatlas     21173 Jan  9 20:04 stderr.txt
[2026-01-09 20:04:50] HITS file was successfully produced:
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas 219677403 Jan  9 20:02 shared/HITS.pool.root.1
[2026-01-09 20:04:50]  *** Contents of shared directory: ***
[2026-01-09 20:04:50] total 437272
[2026-01-09 20:04:50] -rw-r--r--. 2 boincer umatlas 224489145 Jan  9 14:51 ATLAS.root_0
[2026-01-09 20:04:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 14:51 start_atlas.sh
[2026-01-09 20:04:50] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 14:51 input.tar.gz
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas 219677403 Jan  9 20:02 HITS.pool.root.1
[2026-01-09 20:04:50] -rw-------. 1 boincer umatlas   2979840 Jan  9 20:04 result.tar.gz
20:04:52 (2076304): run_atlas exited; CPU time 47316.550313
20:04:52 (2076304): called boinc_finish(0)

</stderr_txt>
]]>

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