Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:05:13 (3104531): wrapper (7.7.26015): starting
11:05:13 (3104531): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 11:05:13] Arguments: --nthreads 9
[2026-01-09 11:05:13] Threads: 9
[2026-01-09 11:05:13] Checking for CVMFS
[2026-01-09 11:05:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:05:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:05:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:05:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:05:14] 2.13.3.0 3884235 17155 164844 154948 0 135 39274339 40960001 13124 16776704 0 19102136 99.537 23793991 43954 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:05:14] CVMFS is ok
[2026-01-09 11:05:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:05:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:05:14] Further information can be found at the LHC@home message board.
[2026-01-09 11:05:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:05:14] Checking for apptainer binary...
[2026-01-09 11:05:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:05:14] Running /usr/bin/apptainer --version
[2026-01-09 11:05:14] apptainer version 1.4.5-2.el9
[2026-01-09 11:05:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:05:35] c-206-35.aglt2.org
[2026-01-09 11:05:35] apptainer works
[2026-01-09 11:05:35] Set ATHENA_PROC_NUMBER=9
[2026-01-09 11:05:35] Set ATHENA_CORE_NUMBER=9
[2026-01-09 11:05:35] Starting ATLAS job with PandaID=6963167197
[2026-01-09 11:05:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:28:38]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:28:38] 2026-01-09 21:27:52,164 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:28:38] 2026-01-09 21:27:52,165 | INFO     | sum of square deviations: 9784392123.325947
[2026-01-09 16:28:38] 2026-01-09 21:27:52,167 | INFO     | sum of deviations: 32542230742.632847
[2026-01-09 16:28:38] 2026-01-09 21:27:52,167 | INFO     | mean x: 1767984412.927215
[2026-01-09 16:28:38] 2026-01-09 21:27:52,167 | INFO     | mean y: 2569784.810126582
[2026-01-09 16:28:38] 2026-01-09 21:27:52,167 | INFO     | intersect: -5877627573.35733
[2026-01-09 16:28:38] 2026-01-09 21:27:52,167 | INFO     | chi2: 1.1721767799516232
[2026-01-09 16:28:38] 2026-01-09 21:27:52,168 | INFO     | sum of square deviations: 9327270810.263603
[2026-01-09 16:28:38] 2026-01-09 21:27:52,170 | INFO     | sum of deviations: 31772023343.68168
[2026-01-09 16:28:38] 2026-01-09 21:27:52,170 | INFO     | mean x: 1767984260.4308681
[2026-01-09 16:28:38] 2026-01-09 21:27:52,170 | INFO     | mean y: 2569527.845659164
[2026-01-09 16:28:38] 2026-01-09 21:27:52,170 | INFO     | intersect: -6019817763.821689
[2026-01-09 16:28:38] 2026-01-09 21:27:52,170 | INFO     | chi2: 1.1724414902322267
[2026-01-09 16:28:38] 2026-01-09 21:27:52,170 | INFO     | current chi2=1.1724414902322267 (change=-0.022582795115120013 %)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,170 | INFO     | right removable region: 310
[2026-01-09 16:28:38] 2026-01-09 21:27:52,171 | INFO     | sum of square deviations: 9327207492.398724
[2026-01-09 16:28:38] 2026-01-09 21:27:52,173 | INFO     | sum of deviations: 605689044.3955016
[2026-01-09 16:28:38] 2026-01-09 21:27:52,173 | INFO     | mean x: 1767984565.4340837
[2026-01-09 16:28:38] 2026-01-09 21:27:52,173 | INFO     | mean y: 2580326.0192926046
[2026-01-09 16:28:38] 2026-01-09 21:27:52,173 | INFO     | intersect: -112228836.61769842
[2026-01-09 16:28:38] 2026-01-09 21:27:52,173 | INFO     | chi2: 0.11551433575091102
[2026-01-09 16:28:38] 2026-01-09 21:27:52,173 | INFO     | current chi2=0.11551433575091102 (change=90.14531445029321 %)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,174 | INFO     | sum of square deviations: 8884488248.941133
[2026-01-09 16:28:38] 2026-01-09 21:27:52,176 | INFO     | sum of deviations: 12806468505.823528
[2026-01-09 16:28:38] 2026-01-09 21:27:52,176 | INFO     | mean x: 1767984717.9411764
[2026-01-09 16:28:38] 2026-01-09 21:27:52,176 | INFO     | mean y: 2576106.6013071896
[2026-01-09 16:28:38] 2026-01-09 21:27:52,176 | INFO     | intersect: -2545870126.279853
[2026-01-09 16:28:38] 2026-01-09 21:27:52,176 | INFO     | chi2: 0.048071157275539046
[2026-01-09 16:28:38] 2026-01-09 21:27:52,176 | INFO     | current chi2=0.048071157275539046 (change=58.3851156109341 %)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,177 | INFO     | sum of square deviations: 8456001830.451813
[2026-01-09 16:28:38] 2026-01-09 21:27:52,178 | INFO     | sum of deviations: 18213561728.71761
[2026-01-09 16:28:38] 2026-01-09 21:27:52,179 | INFO     | mean x: 1767984870.448505
[2026-01-09 16:28:38] 2026-01-09 21:27:52,179 | INFO     | mean y: 2574208.594684385
[2026-01-09 16:28:38] 2026-01-09 21:27:52,179 | INFO     | intersect: -3805525909.996716
[2026-01-09 16:28:38] 2026-01-09 21:27:52,179 | INFO     | chi2: 0.003982041883301713
[2026-01-09 16:28:38] 2026-01-09 21:27:52,179 | INFO     | current chi2=0.003982041883301713 (change=91.71635943674697 %)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,179 | INFO     | sum of square deviations: 8041515674.429058
[2026-01-09 16:28:38] 2026-01-09 21:27:52,181 | INFO     | sum of deviations: 16305683782.96285
[2026-01-09 16:28:38] 2026-01-09 21:27:52,181 | INFO     | mean x: 1767985022.9560812
[2026-01-09 16:28:38] 2026-01-09 21:27:52,181 | INFO     | mean y: 2574910.381756757
[2026-01-09 16:28:38] 2026-01-09 21:27:52,181 | INFO     | intersect: -3582346873.580687
[2026-01-09 16:28:38] 2026-01-09 21:27:52,182 | INFO     | chi2: 0.003579467030971732
[2026-01-09 16:28:38] 2026-01-09 21:27:52,182 | INFO     | current chi2=0.003579467030971732 (change=10.109759367879532 %)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,182 | INFO     | left removable region: 40
[2026-01-09 16:28:38] 2026-01-09 21:27:52,182 | INFO     | sum of square deviations: 6103008347.866696
[2026-01-09 16:28:38] 2026-01-09 21:27:52,184 | INFO     | sum of deviations: 10762869396.422226
[2026-01-09 16:28:38] 2026-01-09 21:27:52,184 | INFO     | mean x: 1767985449.9777777
[2026-01-09 16:28:38] 2026-01-09 21:27:52,184 | INFO     | mean y: 2576730.4037037035
[2026-01-09 16:28:38] 2026-01-09 21:27:52,184 | INFO     | intersect: -3115327655.150191
[2026-01-09 16:28:38] 2026-01-09 21:27:52,184 | INFO     | chi2: 0.002739359619951175
[2026-01-09 16:28:38] 2026-01-09 21:27:52,184 | INFO     | current memory leak: 1.76 B/s (using 270 data points, chi2=0.00)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | could have reported an average CPU frequency of 3257 MHz (14 samples)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | ..............................
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | . Timing measurements:
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | . get job = 0 s
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | . initial setup = 3 s
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | . payload setup = 8 s
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | . stage-in = 0 s
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | . payload execution = 19258 s
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | . stage-out = 2 s
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | . log creation = 0 s
[2026-01-09 16:28:38] 2026-01-09 21:27:52,185 | INFO     | ..............................
[2026-01-09 16:28:38] 2026-01-09 21:27:52,260 | INFO     | 
[2026-01-09 16:28:38] 2026-01-09 21:27:52,260 | INFO     | job summary report
[2026-01-09 16:28:38] 2026-01-09 21:27:52,260 | INFO     | --------------------------------------------------
[2026-01-09 16:28:38] 2026-01-09 21:27:52,260 | INFO     | PanDA job id: 6963167197
[2026-01-09 16:28:38] 2026-01-09 21:27:52,260 | INFO     | task id: 47898826
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | errors: (none)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | pilot state: finished 
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | transexitcode: 0
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | exeerrorcode: 0
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | exeerrordiag: 
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | exitcode: 0
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | exitmsg: OK
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | cpuconsumptiontime: 49292 s
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | nevents: 400
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | neventsw: 0
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | pid: 3115332
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | pgrp: 3115332
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | corecount: 9
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | event service: False
[2026-01-09 16:28:38] 2026-01-09 21:27:52,261 | INFO     | sizes: {0: 2283143, 1: 2283999, 2: 2283999, 12: 2284027, 17: 2284317, 23: 2284345, 19270: 2317779, 19273: 2326777, 19274: 2326833, 19284: 2327027}
[2026-01-09 16:28:38] 2026-01-09 21:27:52,262 | INFO     | --------------------------------------------------
[2026-01-09 16:28:38] 2026-01-09 21:27:52,262 | INFO     | 
[2026-01-09 16:28:38] 2026-01-09 21:27:52,262 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 16:28:38] 2026-01-09 21:27:52,281 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,281 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,281 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,283 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:28:38] 2026-01-09 21:27:52,283 | INFO     | job 6963167197 has completed (purged errors)
[2026-01-09 16:28:38] 2026-01-09 21:27:52,283 | INFO     | overall cleanup function is called
[2026-01-09 16:28:38] 2026-01-09 21:27:53,291 | INFO     | --- collectZombieJob: --- 10, [3115332]
[2026-01-09 16:28:38] 2026-01-09 21:27:53,291 | INFO     | zombie collector waiting for pid 3115332
[2026-01-09 16:28:38] 2026-01-09 21:27:53,292 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:28:38] 2026-01-09 21:27:53,292 | INFO     | collected zombie processes
[2026-01-09 16:28:38] 2026-01-09 21:27:53,292 | INFO     | will attempt to kill all subprocesses of pid=3115332
[2026-01-09 16:28:38] 2026-01-09 21:27:53,526 | INFO     | process IDs to be killed: [3115332] (in reverse order)
[2026-01-09 16:28:38] 2026-01-09 21:27:53,621 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:28:38] 2026-01-09 21:27:53,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:28:38] 2026-01-09 21:27:53,631 | INFO     | did not find any defunct processes belonging to 3115332
[2026-01-09 16:28:38] 2026-01-09 21:27:53,639 | INFO     | did not find any defunct processes belonging to 3115332
[2026-01-09 16:28:38] 2026-01-09 21:27:53,639 | INFO     | ready for new job
[2026-01-09 16:28:38] 2026-01-09 21:27:53,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:28:38] 2026-01-09 21:27:53,642 | INFO     | ***************************************
[2026-01-09 16:28:38] 2026-01-09 21:27:53,642 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:28:38] 2026-01-09 21:27:53,642 | INFO     | ***************************************
[2026-01-09 16:28:38] 2026-01-09 21:27:53,642 | INFO     | 
[2026-01-09 16:28:38] 2026-01-09 21:27:53,645 | INFO     | architecture information:
[2026-01-09 16:28:38] 2026-01-09 21:27:53,646 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:28:38] 2026-01-09 21:27:53,745 | INFO     | cat /etc/os-release:
[2026-01-09 16:28:38] NAME="CentOS Linux"
[2026-01-09 16:28:38] VERSION="7 (Core)"
[2026-01-09 16:28:38] ID="centos"
[2026-01-09 16:28:38] ID_LIKE="rhel fedora"
[2026-01-09 16:28:38] VERSION_ID="7"
[2026-01-09 16:28:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:28:38] ANSI_COLOR="0;31"
[2026-01-09 16:28:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:28:38] HOME_URL="https://www.centos.org/"
[2026-01-09 16:28:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:28:38] 
[2026-01-09 16:28:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:28:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:28:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:28:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:28:38] 
[2026-01-09 16:28:38] 2026-01-09 21:27:53,745 | INFO     | ***************************************
[2026-01-09 16:28:38] 2026-01-09 21:27:54,248 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 16:28:38] 2026-01-09 21:27:54,360 | INFO     | sufficient remaining disk space (84764786688 B)
[2026-01-09 16:28:38] 2026-01-09 21:27:54,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:28:38] 2026-01-09 21:27:54,361 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:28:38] 2026-01-09 21:27:54,361 | INFO     | update_server=False
[2026-01-09 16:28:38] 2026-01-09 21:27:54,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:28:38] 2026-01-09 21:27:54,459 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 16:28:38] 2026-01-09 21:27:54,459 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 16:28:38] 2026-01-09 21:27:54,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:28:38] 2026-01-09 21:27:54,463 | INFO     | will abort loop
[2026-01-09 16:28:38] 2026-01-09 21:27:54,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:28:38] 2026-01-09 21:27:55,367 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:55,469 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:55,470 | INFO     | all data control threads have been joined
[2026-01-09 16:28:38] 2026-01-09 21:27:55,591 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:55,592 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:55,630 | INFO     | all payload control threads have been joined
[2026-01-09 16:28:38] 2026-01-09 21:27:55,636 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:55,750 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:55,883 | INFO     | [job] validate thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:55,935 | INFO     | all job control threads have been joined
[2026-01-09 16:28:38] 2026-01-09 21:27:55,938 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:56,471 | INFO     | [data] control thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:56,636 | INFO     | [payload] control thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:56,886 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:56,898 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:56,941 | INFO     | [job] control thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:27:57,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:28:38] 2026-01-09 21:27:57,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:28:38] 2026-01-09 21:27:58,281 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:28:01,793 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:28:05,178 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:28:38] 2026-01-09 21:28:06,183 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:28:38] 2026-01-09 21:28:25,037 | INFO     | PID=3108599 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:28:38] 2026-01-09 21:28:25,037 | INFO     | .. there are 11 such processes running
[2026-01-09 16:28:38] 2026-01-09 21:28:25,038 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:28:38] 2026-01-09 21:28:25,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:28:38] 2026-01-09 21:28:25,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:28:38] 2026-01-09 21:28:31,523 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:28:38] 2026-01-09 21:28:32,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127425345344)>', '<ExcThread(monitor, started 140127143692032)>']
[2026-01-09 16:28:38] 2026-01-09 21:28:33,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:28:38] 2026-01-09 21:28:33,076 | INFO     | [monitor] control thread has ended
[2026-01-09 16:28:38] 2026-01-09 21:28:37,565 | INFO     | all workflow threads have been joined
[2026-01-09 16:28:38] 2026-01-09 21:28:37,565 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:28:38] 2026-01-09 21:28:37,566 | INFO     | traces error code: 0
[2026-01-09 16:28:38] 2026-01-09 21:28:37,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:28:38] 2026-01-09 21:28:37,675 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:28:38] 2026-01-09 21:28:37,678 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:28:38] 2026-01-09 21:28:37,719 [wrapper] pilotpid: 3108599
[2026-01-09 16:28:38] 2026-01-09 21:28:37,726 [wrapper] Pilot exit status: 0
[2026-01-09 16:28:38] 2026-01-09 21:28:37,757 [wrapper] pandaids: 6963167197
[2026-01-09 16:28:38] 2026-01-09 21:28:37,857 [wrapper] cleanup supervisor_pilot 3719139 3108600
[2026-01-09 16:28:38] 2026-01-09 21:28:37,859 [wrapper] Test setup, not cleaning
[2026-01-09 16:28:38] 2026-01-09 21:28:37,861 [wrapper] apfmon messages muted
[2026-01-09 16:28:38] 2026-01-09 21:28:37,863 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:28:38] 2026-01-09 21:28:37,865 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:28:38]  *** Error codes and diagnostics ***
[2026-01-09 16:28:38]     "exeErrorCode": 0,
[2026-01-09 16:28:38]     "exeErrorDiag": "",
[2026-01-09 16:28:38]     "pilotErrorCode": 0,
[2026-01-09 16:28:38]     "pilotErrorDiag": "",
[2026-01-09 16:28:38]  *** Listing of results directory ***
[2026-01-09 16:28:38] total 447064
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 16:28:38] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas       100 Jan  9 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:28:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 11:05 run_atlas
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas       105 Jan  9 11:05 job.xml
[2026-01-09 16:28:38] -rw-r--r--. 2 boincer umatlas 222919912 Jan  9 11:05 EVNT.47898824._001378.pool.root.1
[2026-01-09 16:28:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:05 start_atlas.sh
[2026-01-09 16:28:38] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 11:05 shared
[2026-01-09 16:28:38] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 11:05 input.tar.gz
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas         0 Jan  9 11:05 boinc_lockfile
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 11:05 pandaJob.out
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas        57 Jan  9 11:05 setup.sh.local
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas    989377 Jan  9 11:05 agis_schedconf.cvmfs.json
[2026-01-09 16:28:38] drwx------. 5 boincer umatlas      4096 Jan  9 11:05 pilot3
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas 224782204 Jan  9 16:27 HITS.47898826._035572.pool.root.1
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas       530 Jan  9 16:27 boinc_task_state.xml
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas      1030 Jan  9 16:27 memory_monitor_summary.json
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas   1516240 Jan  9 16:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas    549438 Jan  9 16:27 log.47898826._035572.job.log.tgz.1
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas      7774 Jan  9 16:27 heartbeat.json
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas      6907 Jan  9 16:28 init_data.xml
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas        95 Jan  9 16:28 pilot_heartbeat.json
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 16:28 boinc_mmap_file
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas        28 Jan  9 16:28 wrapper_checkpoint.txt
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas      5082 Jan  9 16:28 pilotlog.txt
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas   2538982 Jan  9 16:28 log.47898826._035572.job.log.1
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas       357 Jan  9 16:28 output.list
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas       620 Jan  9 16:28 runtime_log
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas   3102720 Jan  9 16:28 result.tar.gz
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 16:28 runtime_log.err
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas       656 Jan  9 16:28 HvVMDmdzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJagKDmvmYthn.diag
[2026-01-09 16:28:38] -rw-r--r--. 1 boincer umatlas     21068 Jan  9 16:28 stderr.txt
[2026-01-09 16:28:38] HITS file was successfully produced:
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas 224782204 Jan  9 16:27 shared/HITS.pool.root.1
[2026-01-09 16:28:38]  *** Contents of shared directory: ***
[2026-01-09 16:28:38] total 440848
[2026-01-09 16:28:38] -rw-r--r--. 2 boincer umatlas 222919912 Jan  9 11:05 ATLAS.root_0
[2026-01-09 16:28:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 11:05 start_atlas.sh
[2026-01-09 16:28:38] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 11:05 input.tar.gz
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas 224782204 Jan  9 16:27 HITS.pool.root.1
[2026-01-09 16:28:38] -rw-------. 1 boincer umatlas   3102720 Jan  9 16:28 result.tar.gz
16:28:39 (3104531): run_atlas exited; CPU time 49556.387175
16:28:39 (3104531): called boinc_finish(0)

</stderr_txt>
]]>

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