Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:09:17 (2755959): wrapper (7.7.26015): starting
22:09:17 (2755959): wrapper: running run_atlas (--nthreads 3)
[2026-01-11 22:09:17] Arguments: --nthreads 3
[2026-01-11 22:09:17] Threads: 3
[2026-01-11 22:09:17] Checking for CVMFS
[2026-01-11 22:09:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 22:09:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 22:09:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 22:09:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 22:09:17] 2.12.7.0 2907148 6089 61256 155028 1 188 4173484 6144000 2751 130560 1 9296367 99.973 338452 1436 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2026-01-11 22:09:17] CVMFS is ok
[2026-01-11 22:09:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 22:09:17] Checking for apptainer binary...
[2026-01-11 22:09:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 22:09:17] Running /usr/bin/apptainer --version
[2026-01-11 22:09:17] apptainer version 1.4.5
[2026-01-11 22:09:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 22:09:17] Ryzen3
[2026-01-11 22:09:17] apptainer works
[2026-01-11 22:09:17] Set ATHENA_PROC_NUMBER=3
[2026-01-11 22:09:17] Set ATHENA_CORE_NUMBER=3
[2026-01-11 22:09:17] Starting ATLAS job with PandaID=6963167637
[2026-01-11 22:09:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 01:54:52]  *** The last 200 lines of the pilot log: ***
[2026-01-12 01:54:52] 2026-01-12 00:53:54,040 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 01:54:52] 2026-01-12 00:53:54,042 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3950.7194999999997
[2026-01-12 01:54:52] 2026-01-12 00:53:54,043 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6963167637/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,044 | INFO     | extracted standard info from prmon json
[2026-01-12 01:54:52] 2026-01-12 00:53:54,044 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 01:54:52] 2026-01-12 00:53:54,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 01:54:52] 2026-01-12 00:53:54,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 01:54:52] 2026-01-12 00:53:54,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 01:54:52] 2026-01-12 00:53:54,046 | INFO     | fitting pss+swap vs Time
[2026-01-12 01:54:52] 2026-01-12 00:53:54,046 | INFO     | sum of square deviations: 3346927870.0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,047 | INFO     | sum of deviations: 11690050369.999998
[2026-01-12 01:54:52] 2026-01-12 00:53:54,047 | INFO     | mean x: 1768172495.0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,047 | INFO     | mean y: 2283697.1628959277
[2026-01-12 01:54:52] 2026-01-12 00:53:54,047 | INFO     | intersect: -6173536736.457195
[2026-01-12 01:54:52] 2026-01-12 00:53:54,048 | INFO     | chi2: 1.7175865586842725
[2026-01-12 01:54:52] 2026-01-12 00:53:54,048 | INFO     | sum of square deviations: 3124858590.0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,049 | INFO     | sum of deviations: 23381848084.999996
[2026-01-12 01:54:52] 2026-01-12 00:53:54,049 | INFO     | mean x: 1768172342.5
[2026-01-12 01:54:52] 2026-01-12 00:53:54,049 | INFO     | mean y: 2291568.6018518517
[2026-01-12 01:54:52] 2026-01-12 00:53:54,049 | INFO     | intersect: -13228110995.129387
[2026-01-12 01:54:52] 2026-01-12 00:53:54,049 | INFO     | chi2: 1.0564227096148706
[2026-01-12 01:54:52] 2026-01-12 00:53:54,049 | INFO     | current chi2=1.0564227096148706 (change=38.49377172442913 %)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,049 | INFO     | sum of square deviations: 2912836010.0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,050 | INFO     | sum of deviations: 22348027954.000008
[2026-01-12 01:54:52] 2026-01-12 00:53:54,050 | INFO     | mean x: 1768172190.0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,050 | INFO     | mean y: 2290824.895734597
[2026-01-12 01:54:52] 2026-01-12 00:53:54,050 | INFO     | intersect: -13563581539.338533
[2026-01-12 01:54:52] 2026-01-12 00:53:54,050 | INFO     | chi2: 1.0568671585465486
[2026-01-12 01:54:52] 2026-01-12 00:53:54,051 | INFO     | current chi2=1.0568671585465486 (change=-0.042071126229383256 %)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,051 | INFO     | right removable region: 210
[2026-01-12 01:54:52] 2026-01-12 00:53:54,051 | INFO     | sum of square deviations: 3124858590.0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,052 | INFO     | sum of deviations: -3850744651.500001
[2026-01-12 01:54:52] 2026-01-12 00:53:54,052 | INFO     | mean x: 1768172647.5
[2026-01-12 01:54:52] 2026-01-12 00:53:54,052 | INFO     | mean y: 2294140.5231481483
[2026-01-12 01:54:52] 2026-01-12 00:53:54,052 | INFO     | intersect: 2181202775.6461287
[2026-01-12 01:54:52] 2026-01-12 00:53:54,052 | INFO     | chi2: 0.6760749418543752
[2026-01-12 01:54:52] 2026-01-12 00:53:54,052 | INFO     | current chi2=0.6760749418543752 (change=60.63808613102616 %)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,052 | INFO     | sum of square deviations: 2912836010.0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,053 | INFO     | sum of deviations: -4791053154.999998
[2026-01-12 01:54:52] 2026-01-12 00:53:54,053 | INFO     | mean x: 1768172800.0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,053 | INFO     | mean y: 2294816.0805687206
[2026-01-12 01:54:52] 2026-01-12 00:53:54,053 | INFO     | intersect: 2910597872.9441032
[2026-01-12 01:54:52] 2026-01-12 00:53:54,054 | INFO     | chi2: 0.6757017258912337
[2026-01-12 01:54:52] 2026-01-12 00:53:54,054 | INFO     | current chi2=0.6757017258912337 (change=0.05520334212030869 %)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,054 | INFO     | left removable region: 20
[2026-01-12 01:54:52] 2026-01-12 00:53:54,054 | INFO     | sum of square deviations: 2126802667.5
[2026-01-12 01:54:52] 2026-01-12 00:53:54,055 | INFO     | sum of deviations: 4608651900.499999
[2026-01-12 01:54:52] 2026-01-12 00:53:54,055 | INFO     | mean x: 1768172769.5
[2026-01-12 01:54:52] 2026-01-12 00:53:54,055 | INFO     | mean y: 2303943.7210526317
[2026-01-12 01:54:52] 2026-01-12 00:53:54,055 | INFO     | intersect: -3829218801.239263
[2026-01-12 01:54:52] 2026-01-12 00:53:54,055 | INFO     | chi2: 0.0011962451981274123
[2026-01-12 01:54:52] 2026-01-12 00:53:54,055 | INFO     | current memory leak: 2.17 B/s (using 190 data points, chi2=0.00)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,055 | INFO     | could have reported an average CPU frequency of 3939 MHz (11 samples)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | ..............................
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | . Timing measurements:
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | . get job = 0 s
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | . initial setup = 1 s
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | . payload setup = 3 s
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | . stage-in = 0 s
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | . payload execution = 13441 s
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | . stage-out = 0 s
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | . log creation = 0 s
[2026-01-12 01:54:52] 2026-01-12 00:53:54,056 | INFO     | ..............................
[2026-01-12 01:54:52] 2026-01-12 00:53:54,420 | INFO     | 
[2026-01-12 01:54:52] 2026-01-12 00:53:54,420 | INFO     | job summary report
[2026-01-12 01:54:52] 2026-01-12 00:53:54,420 | INFO     | --------------------------------------------------
[2026-01-12 01:54:52] 2026-01-12 00:53:54,420 | INFO     | PanDA job id: 6963167637
[2026-01-12 01:54:52] 2026-01-12 00:53:54,420 | INFO     | task id: 47898826
[2026-01-12 01:54:52] 2026-01-12 00:53:54,420 | INFO     | errors: (none)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,420 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | pilot state: finished 
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | transexitcode: 0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | exeerrorcode: 0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | exeerrordiag: 
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | exitcode: 0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | exitmsg: OK
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | cpuconsumptiontime: 39428 s
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | nevents: 400
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | neventsw: 0
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | pid: 2766125
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | pgrp: 2766125
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | corecount: 3
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | event service: False
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | sizes: {0: 2283971, 3: 2284233, 11: 2284261, 13448: 2314717, 13449: 2323715, 13452: 2323771, 13457: 2324093}
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | --------------------------------------------------
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | 
[2026-01-12 01:54:52] 2026-01-12 00:53:54,421 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | job 6963167637 has completed (purged errors)
[2026-01-12 01:54:52] 2026-01-12 00:53:54,438 | INFO     | overall cleanup function is called
[2026-01-12 01:54:52] 2026-01-12 00:53:55,443 | INFO     | --- collectZombieJob: --- 10, [2766125]
[2026-01-12 01:54:52] 2026-01-12 00:53:55,444 | INFO     | zombie collector waiting for pid 2766125
[2026-01-12 01:54:52] 2026-01-12 00:53:55,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 01:54:52] 2026-01-12 00:53:55,444 | INFO     | collected zombie processes
[2026-01-12 01:54:52] 2026-01-12 00:53:55,444 | INFO     | will attempt to kill all subprocesses of pid=2766125
[2026-01-12 01:54:52] 2026-01-12 00:53:55,524 | INFO     | process IDs to be killed: [2766125] (in reverse order)
[2026-01-12 01:54:52] 2026-01-12 00:53:55,561 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 01:54:52] 2026-01-12 00:53:55,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 01:54:52] 2026-01-12 00:53:55,564 | INFO     | did not find any defunct processes belonging to 2766125
[2026-01-12 01:54:52] 2026-01-12 00:53:55,566 | INFO     | did not find any defunct processes belonging to 2766125
[2026-01-12 01:54:52] 2026-01-12 00:53:55,566 | INFO     | ready for new job
[2026-01-12 01:54:52] 2026-01-12 00:53:55,566 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 01:54:52] 2026-01-12 00:53:55,568 | INFO     | ***************************************
[2026-01-12 01:54:52] 2026-01-12 00:53:55,568 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 01:54:52] 2026-01-12 00:53:55,568 | INFO     | ***************************************
[2026-01-12 01:54:52] 2026-01-12 00:53:55,568 | INFO     | 
[2026-01-12 01:54:52] 2026-01-12 00:53:55,569 | INFO     | architecture information:
[2026-01-12 01:54:52] 2026-01-12 00:53:55,569 | INFO     | executing command: cat /etc/os-release
[2026-01-12 01:54:52] 2026-01-12 00:53:55,580 | INFO     | cat /etc/os-release:
[2026-01-12 01:54:52] NAME="CentOS Linux"
[2026-01-12 01:54:52] VERSION="7 (Core)"
[2026-01-12 01:54:52] ID="centos"
[2026-01-12 01:54:52] ID_LIKE="rhel fedora"
[2026-01-12 01:54:52] VERSION_ID="7"
[2026-01-12 01:54:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 01:54:52] ANSI_COLOR="0;31"
[2026-01-12 01:54:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 01:54:52] HOME_URL="https://www.centos.org/"
[2026-01-12 01:54:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 01:54:52] 
[2026-01-12 01:54:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 01:54:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 01:54:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 01:54:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 01:54:52] 
[2026-01-12 01:54:52] 2026-01-12 00:53:55,581 | INFO     | ***************************************
[2026-01-12 01:54:52] 2026-01-12 00:53:56,084 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-12 01:54:52] 2026-01-12 00:53:56,095 | INFO     | sufficient remaining disk space (239278751744 B)
[2026-01-12 01:54:52] 2026-01-12 00:53:56,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 01:54:52] 2026-01-12 00:53:56,095 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 01:54:52] 2026-01-12 00:53:56,095 | INFO     | update_server=False
[2026-01-12 01:54:52] 2026-01-12 00:53:56,095 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 01:54:52] 2026-01-12 00:53:56,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 01:54:52] 2026-01-12 00:53:56,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 01:54:52] 2026-01-12 00:53:56,542 | INFO     | aborting loop
[2026-01-12 01:54:52] 2026-01-12 00:53:56,586 | INFO     | all payload control threads have been joined
[2026-01-12 01:54:52] 2026-01-12 00:53:56,637 | INFO     | all data control threads have been joined
[2026-01-12 01:54:52] 2026-01-12 00:53:56,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 01:54:52] 2026-01-12 00:53:57,100 | INFO     | [job] retrieve thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:57,100 | INFO     | [job] queue monitor thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:57,113 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:57,191 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:57,413 | INFO     | [payload] failed_post thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:57,547 | INFO     | [job] job monitor thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:57,590 | INFO     | [payload] control thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:57,643 | INFO     | [data] control thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:57,649 | INFO     | all job control threads have been joined
[2026-01-12 01:54:52] 2026-01-12 00:53:57,980 | INFO     | [payload] validate_post thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:58,223 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:58,325 | INFO     | [job] validate thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:58,350 | INFO     | [data] copytool_in thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:58,653 | INFO     | [job] control thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:58,972 | INFO     | [data] copytool_out thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:53:59,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 01:54:52] 2026-01-12 00:54:03,482 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:54:06,243 | INFO     | job.realtimelogging is not enabled
[2026-01-12 01:54:52] 2026-01-12 00:54:07,247 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 01:54:52] 2026-01-12 00:54:22,751 [wrapper] supervise_pilot (15 min periods counter: 16)
[2026-01-12 01:54:52] 2026-01-12 00:54:25,955 | INFO     | PID=2759679 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 01:54:52] 2026-01-12 00:54:25,955 | INFO     | .. there are 4 such processes running
[2026-01-12 01:54:52] 2026-01-12 00:54:25,955 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 01:54:52] 2026-01-12 00:54:25,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 01:54:52] 2026-01-12 00:54:25,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 01:54:52] 2026-01-12 00:54:45,917 | INFO     | [monitor] cgroup control has ended
[2026-01-12 01:54:52] 2026-01-12 00:54:46,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595118827328)>', '<ExcThread(monitor, started 140594412254976)>']
[2026-01-12 01:54:52] 2026-01-12 00:54:47,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 01:54:52] 2026-01-12 00:54:47,047 | INFO     | [monitor] control thread has ended
[2026-01-12 01:54:52] 2026-01-12 00:54:51,947 | INFO     | all workflow threads have been joined
[2026-01-12 01:54:52] 2026-01-12 00:54:51,948 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 01:54:52] 2026-01-12 00:54:51,948 | INFO     | traces error code: 0
[2026-01-12 01:54:52] 2026-01-12 00:54:51,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 01:54:52] 2026-01-12 00:54:52,032 [wrapper] ==== pilot stdout END ====
[2026-01-12 01:54:52] 2026-01-12 00:54:52,034 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 01:54:52] 2026-01-12 00:54:52,036 [wrapper] pilotpid: 2759679
[2026-01-12 01:54:52] 2026-01-12 00:54:52,037 [wrapper] Pilot exit status: 0
[2026-01-12 01:54:52] 2026-01-12 00:54:52,045 [wrapper] pandaids: 6963167637
[2026-01-12 01:54:52] 2026-01-12 00:54:52,069 [wrapper] cleanup supervisor_pilot 2923435 2759680
[2026-01-12 01:54:52] 2026-01-12 00:54:52,071 [wrapper] Test setup, not cleaning
[2026-01-12 01:54:52] 2026-01-12 00:54:52,073 [wrapper] apfmon messages muted
[2026-01-12 01:54:52] 2026-01-12 00:54:52,075 [wrapper] ==== wrapper stdout END ====
[2026-01-12 01:54:52] 2026-01-12 00:54:52,076 [wrapper] ==== wrapper stderr END ====
[2026-01-12 01:54:52]  *** Error codes and diagnostics ***
[2026-01-12 01:54:52]     "exeErrorCode": 0,
[2026-01-12 01:54:52]     "exeErrorDiag": "",
[2026-01-12 01:54:52]     "pilotErrorCode": 0,
[2026-01-12 01:54:52]     "pilotErrorDiag": "",
[2026-01-12 01:54:52]  *** Listing of results directory ***
[2026-01-12 01:54:52] insgesamt 449580
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc    579449  9. Jan 01:57 pilot3.tar.gz
[2026-01-12 01:54:52] -rwx------ 1 boinc boinc     36322  9. Jan 01:57 runpilot2-wrapper.sh
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc      5112  9. Jan 01:59 queuedata.json
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc       100 11. Jan 22:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 01:54:52] -rwxr-xr-x 1 boinc boinc      7986 11. Jan 22:09 run_atlas
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc       105 11. Jan 22:09 job.xml
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc      6914 11. Jan 22:09 init_data.xml
[2026-01-12 01:54:52] -rw-r--r-- 2 boinc boinc 228076601 11. Jan 22:09 EVNT.47898824._001334.pool.root.1
[2026-01-12 01:54:52] drwxrwx--x 2 boinc boinc      4096 11. Jan 22:09 shared
[2026-01-12 01:54:52] -rw-r--r-- 2 boinc boinc    592397 11. Jan 22:09 input.tar.gz
[2026-01-12 01:54:52] -rw-r--r-- 2 boinc boinc     15847 11. Jan 22:09 start_atlas.sh
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc         0 11. Jan 22:09 boinc_lockfile
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc      2520 11. Jan 22:09 pandaJob.out
[2026-01-12 01:54:52] -rw------- 1 boinc boinc        52 11. Jan 22:09 setup.sh.local
[2026-01-12 01:54:52] -rw------- 1 boinc boinc    989946 11. Jan 22:09 agis_schedconf.cvmfs.json
[2026-01-12 01:54:52] drwx------ 5 boinc boinc      4096 11. Jan 22:09 pilot3
[2026-01-12 01:54:52] -rw------- 1 boinc boinc 223788808 12. Jan 01:53 HITS.47898826._035878.pool.root.1
[2026-01-12 01:54:52] -rw------- 1 boinc boinc        95 12. Jan 01:53 pilot_heartbeat.json
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc       530 12. Jan 01:53 boinc_task_state.xml
[2026-01-12 01:54:52] -rw------- 1 boinc boinc      1018 12. Jan 01:53 memory_monitor_summary.json
[2026-01-12 01:54:52] -rw------- 1 boinc boinc   1516240 12. Jan 01:53 agis_ddmendpoints.agis.ALL.json
[2026-01-12 01:54:52] -rw------- 1 boinc boinc    363482 12. Jan 01:53 log.47898826._035878.job.log.tgz.1
[2026-01-12 01:54:52] -rw------- 1 boinc boinc      7733 12. Jan 01:53 heartbeat.json
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc      8192 12. Jan 01:54 boinc_mmap_file
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc        28 12. Jan 01:54 wrapper_checkpoint.txt
[2026-01-12 01:54:52] -rw------- 1 boinc boinc      4896 12. Jan 01:54 pilotlog.txt
[2026-01-12 01:54:52] -rw------- 1 boinc boinc   1932701 12. Jan 01:54 log.47898826._035878.job.log.1
[2026-01-12 01:54:52] -rw------- 1 boinc boinc       357 12. Jan 01:54 output.list
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc       620 12. Jan 01:54 runtime_log
[2026-01-12 01:54:52] -rw------- 1 boinc boinc   2314240 12. Jan 01:54 result.tar.gz
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc      9270 12. Jan 01:54 runtime_log.err
[2026-01-12 01:54:52] -rw------- 1 boinc boinc       646 12. Jan 01:54 COTMDmzzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhqlKDmF25cVo.diag
[2026-01-12 01:54:52] -rw-r--r-- 1 boinc boinc     20738 12. Jan 01:54 stderr.txt
[2026-01-12 01:54:52] HITS file was successfully produced:
[2026-01-12 01:54:52] -rw------- 1 boinc boinc 223788808 12. Jan 01:53 shared/HITS.pool.root.1
[2026-01-12 01:54:52]  *** Contents of shared directory: ***
[2026-01-12 01:54:52] insgesamt 444140
[2026-01-12 01:54:52] -rw-r--r-- 2 boinc boinc 228076601 11. Jan 22:09 ATLAS.root_0
[2026-01-12 01:54:52] -rw-r--r-- 2 boinc boinc    592397 11. Jan 22:09 input.tar.gz
[2026-01-12 01:54:52] -rw-r--r-- 2 boinc boinc     15847 11. Jan 22:09 start_atlas.sh
[2026-01-12 01:54:52] -rw------- 1 boinc boinc 223788808 12. Jan 01:53 HITS.pool.root.1
[2026-01-12 01:54:52] -rw------- 1 boinc boinc   2314240 12. Jan 01:54 result.tar.gz
01:54:53 (2755959): run_atlas exited; CPU time 39545.638345
01:54:53 (2755959): called boinc_finish(0)

</stderr_txt>
]]>

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