Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:01:41 (2286): wrapper (7.7.26015): starting
19:01:41 (2286): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:01:41] Arguments: --nthreads 8
[2026-01-09 19:01:41] Threads: 8
[2026-01-09 19:01:41] Checking for CVMFS
[2026-01-09 19:01:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:01:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:01:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:01:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:01:42] 2.11.2.0 23641 35747 96272 154951 0 57 17464619 25165825 0 130560 0 16343768 99.802 9708457 3031 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 19:01:42] CVMFS is ok
[2026-01-09 19:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:01:42] Checking for apptainer binary...
[2026-01-09 19:01:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:01:42] Running /usr/bin/apptainer --version
[2026-01-09 19:01:42] apptainer version 1.3.2-1.el7
[2026-01-09 19:01:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:01:43] cg-vwn478.simple-grid.lan
[2026-01-09 19:01:43] apptainer works
[2026-01-09 19:01:43] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:01:43] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:01:43] Starting ATLAS job with PandaID=6963167618
[2026-01-09 19:01:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:37:20]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:37:20] 2026-01-09 20:36:23,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:37:20] 2026-01-09 20:36:23,438 | INFO     | time since job start (9263s) is within the limit (349056.0s)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,472 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:37:20] 2026-01-09 20:36:24,473 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 21:37:20] 2026-01-09 20:36:24,475 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963167618/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,476 | INFO     | extracted standard info from prmon json
[2026-01-09 21:37:20] 2026-01-09 20:36:24,476 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:37:20] 2026-01-09 20:36:24,476 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:37:20] 2026-01-09 20:36:24,476 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:37:20] 2026-01-09 20:36:24,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:37:20] 2026-01-09 20:36:24,480 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:37:20] 2026-01-09 20:36:24,481 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,482 | INFO     | sum of deviations: 18678037892.5
[2026-01-09 21:37:20] 2026-01-09 20:36:24,482 | INFO     | mean x: 1767986358.5
[2026-01-09 21:37:20] 2026-01-09 20:36:24,482 | INFO     | mean y: 2456391.2565789474
[2026-01-09 21:37:20] 2026-01-09 20:36:24,482 | INFO     | intersect: -30323867697.45148
[2026-01-09 21:37:20] 2026-01-09 20:36:24,482 | INFO     | chi2: 2.1977511330925927
[2026-01-09 21:37:20] 2026-01-09 20:36:24,483 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,484 | INFO     | sum of deviations: 27759396026.000004
[2026-01-09 21:37:20] 2026-01-09 20:36:24,484 | INFO     | mean x: 1767986206.0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,484 | INFO     | mean y: 2469318.680272109
[2026-01-09 21:37:20] 2026-01-09 20:36:24,485 | INFO     | intersect: -49826115748.937256
[2026-01-09 21:37:20] 2026-01-09 20:36:24,485 | INFO     | chi2: 1.4265518685479508
[2026-01-09 21:37:20] 2026-01-09 20:36:24,485 | INFO     | current chi2=1.4265518685479508 (change=35.09038184225342 %)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,485 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 21:37:20] 2026-01-09 20:36:24,486 | INFO     | sum of deviations: 26631737703.999996
[2026-01-09 21:37:20] 2026-01-09 20:36:24,487 | INFO     | mean x: 1767986053.5
[2026-01-09 21:37:20] 2026-01-09 20:36:24,487 | INFO     | mean y: 2467547.4929577466
[2026-01-09 21:37:20] 2026-01-09 20:36:24,487 | INFO     | intersect: -53031781185.452286
[2026-01-09 21:37:20] 2026-01-09 20:36:24,487 | INFO     | chi2: 1.4272328501652167
[2026-01-09 21:37:20] 2026-01-09 20:36:24,488 | INFO     | current chi2=1.4272328501652167 (change=-0.04773619748990151 %)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,488 | INFO     | right removable region: 141
[2026-01-09 21:37:20] 2026-01-09 20:36:24,488 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,489 | INFO     | sum of deviations: -3192555474.999999
[2026-01-09 21:37:20] 2026-01-09 20:36:24,489 | INFO     | mean x: 1767986511.0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,489 | INFO     | mean y: 2487951.646258503
[2026-01-09 21:37:20] 2026-01-09 20:36:24,490 | INFO     | intersect: 5733179979.7988615
[2026-01-09 21:37:20] 2026-01-09 20:36:24,490 | INFO     | chi2: 0.8083815535004548
[2026-01-09 21:37:20] 2026-01-09 20:36:24,490 | INFO     | current chi2=0.8083815535004548 (change=63.21778470144931 %)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,490 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 21:37:20] 2026-01-09 20:36:24,491 | INFO     | sum of deviations: -4694722198.999997
[2026-01-09 21:37:20] 2026-01-09 20:36:24,492 | INFO     | mean x: 1767986663.5
[2026-01-09 21:37:20] 2026-01-09 20:36:24,492 | INFO     | mean y: 2490309.352112676
[2026-01-09 21:37:20] 2026-01-09 20:36:24,492 | INFO     | intersect: 9351529170.651329
[2026-01-09 21:37:20] 2026-01-09 20:36:24,492 | INFO     | chi2: 0.8059398269633509
[2026-01-09 21:37:20] 2026-01-09 20:36:24,493 | INFO     | current chi2=0.8059398269633509 (change=0.3020512438131205 %)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,493 | INFO     | left removable region: 20
[2026-01-09 21:37:20] 2026-01-09 20:36:24,493 | INFO     | sum of square deviations: 549294020.0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,494 | INFO     | sum of deviations: 2984582379.9999995
[2026-01-09 21:37:20] 2026-01-09 20:36:24,494 | INFO     | mean x: 1767986633.0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,494 | INFO     | mean y: 2507296.504132231
[2026-01-09 21:37:20] 2026-01-09 20:36:24,494 | INFO     | intersect: -9603826580.80137
[2026-01-09 21:37:20] 2026-01-09 20:36:24,494 | INFO     | chi2: 0.0005508310251129416
[2026-01-09 21:37:20] 2026-01-09 20:36:24,495 | INFO     | current memory leak: 5.43 B/s (using 121 data points, chi2=0.00)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,495 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,495 | INFO     | ..............................
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | . Timing measurements:
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | . get job = 0 s
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | . initial setup = 1 s
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | . payload setup = 7 s
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | . stage-in = 0 s
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | . payload execution = 9222 s
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | . stage-out = 1 s
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | . log creation = 0 s
[2026-01-09 21:37:20] 2026-01-09 20:36:24,496 | INFO     | ..............................
[2026-01-09 21:37:20] 2026-01-09 20:36:24,608 | INFO     | 
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | job summary report
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | --------------------------------------------------
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | PanDA job id: 6963167618
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | task id: 47898826
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | errors: (none)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | pilot state: finished 
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | transexitcode: 0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,609 | INFO     | exeerrorcode: 0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | exeerrordiag: 
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | exitcode: 0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | exitmsg: OK
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | cpuconsumptiontime: 67890 s
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | nevents: 400
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | neventsw: 0
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | pid: 12449
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | pgrp: 12449
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | corecount: 8
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | event service: False
[2026-01-09 21:37:20] 2026-01-09 20:36:24,610 | INFO     | sizes: {0: 2283799, 1: 2283998, 7: 2284260, 12: 2284288, 9234: 2312195, 9236: 2321193, 9239: 2321377, 9247: 2321571}
[2026-01-09 21:37:20] 2026-01-09 20:36:24,611 | INFO     | --------------------------------------------------
[2026-01-09 21:37:20] 2026-01-09 20:36:24,611 | INFO     | 
[2026-01-09 21:37:20] 2026-01-09 20:36:24,611 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-09 21:37:20] 2026-01-09 20:36:24,652 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,652 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,652 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,652 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,654 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,654 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:37:20] 2026-01-09 20:36:24,655 | INFO     | job 6963167618 has completed (purged errors)
[2026-01-09 21:37:20] 2026-01-09 20:36:24,655 | INFO     | overall cleanup function is called
[2026-01-09 21:37:20] 2026-01-09 20:36:25,663 | INFO     | --- collectZombieJob: --- 10, [12449]
[2026-01-09 21:37:20] 2026-01-09 20:36:25,663 | INFO     | zombie collector waiting for pid 12449
[2026-01-09 21:37:20] 2026-01-09 20:36:25,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:37:20] 2026-01-09 20:36:25,664 | INFO     | collected zombie processes
[2026-01-09 21:37:20] 2026-01-09 20:36:25,664 | INFO     | will attempt to kill all subprocesses of pid=12449
[2026-01-09 21:37:20] 2026-01-09 20:36:25,726 | INFO     | process IDs to be killed: [12449] (in reverse order)
[2026-01-09 21:37:20] 2026-01-09 20:36:25,776 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:37:20] 2026-01-09 20:36:25,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:37:20] 2026-01-09 20:36:25,778 | INFO     | did not find any defunct processes belonging to 12449
[2026-01-09 21:37:20] 2026-01-09 20:36:25,780 | INFO     | did not find any defunct processes belonging to 12449
[2026-01-09 21:37:20] 2026-01-09 20:36:25,780 | INFO     | ready for new job
[2026-01-09 21:37:20] 2026-01-09 20:36:25,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:37:20] 2026-01-09 20:36:25,782 | INFO     | ***************************************
[2026-01-09 21:37:20] 2026-01-09 20:36:25,782 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:37:20] 2026-01-09 20:36:25,782 | INFO     | ***************************************
[2026-01-09 21:37:20] 2026-01-09 20:36:25,783 | INFO     | 
[2026-01-09 21:37:20] 2026-01-09 20:36:25,783 | INFO     | pilot is running in a VM
[2026-01-09 21:37:20] 2026-01-09 20:36:25,783 | INFO     | architecture information:
[2026-01-09 21:37:20] 2026-01-09 20:36:25,784 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:37:20] 2026-01-09 20:36:25,802 | INFO     | cat /etc/os-release:
[2026-01-09 21:37:20] NAME="CentOS Linux"
[2026-01-09 21:37:20] VERSION="7 (Core)"
[2026-01-09 21:37:20] ID="centos"
[2026-01-09 21:37:20] ID_LIKE="rhel fedora"
[2026-01-09 21:37:20] VERSION_ID="7"
[2026-01-09 21:37:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:37:20] ANSI_COLOR="0;31"
[2026-01-09 21:37:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:37:20] HOME_URL="https://www.centos.org/"
[2026-01-09 21:37:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:37:20] 
[2026-01-09 21:37:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:37:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:37:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:37:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:37:20] 
[2026-01-09 21:37:20] 2026-01-09 20:36:25,802 | INFO     | ***************************************
[2026-01-09 21:37:20] 2026-01-09 20:36:26,306 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-09 21:37:20] 2026-01-09 20:36:26,341 | INFO     | sufficient remaining disk space (498203623424 B)
[2026-01-09 21:37:20] 2026-01-09 20:36:26,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:37:20] 2026-01-09 20:36:26,342 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:37:20] 2026-01-09 20:36:26,342 | INFO     | update_server=False
[2026-01-09 21:37:20] 2026-01-09 20:36:26,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:37:20] 2026-01-09 20:36:26,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:37:20] 2026-01-09 20:36:26,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:37:20] 2026-01-09 20:36:26,703 | INFO     | all data control threads have been joined
[2026-01-09 21:37:20] 2026-01-09 20:36:26,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:37:20] 2026-01-09 20:36:26,847 | INFO     | aborting loop
[2026-01-09 21:37:20] 2026-01-09 20:36:27,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:37:20] 2026-01-09 20:36:27,106 | INFO     | all job control threads have been joined
[2026-01-09 21:37:20] 2026-01-09 20:36:27,208 | INFO     | all payload control threads have been joined
[2026-01-09 21:37:20] 2026-01-09 20:36:27,348 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:27,349 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:27,709 | INFO     | [data] control thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:27,853 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,042 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,060 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,112 | INFO     | [job] control thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,151 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,214 | INFO     | [payload] control thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,339 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,349 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,359 | INFO     | [job] validate thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,387 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,473 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:28,777 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:31,019 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:37:20] 2026-01-09 20:36:56,532 | INFO     | PID=6006 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 21:37:20] 2026-01-09 20:36:56,533 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:37:20] 2026-01-09 20:36:56,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:37:20] 2026-01-09 20:36:56,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:37:20] 2026-01-09 20:37:15,344 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:37:20] 2026-01-09 20:37:15,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171674711872)>', '<ExcThread(monitor, started 140171374728960)>']
[2026-01-09 21:37:20] 2026-01-09 20:37:15,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:37:20] 2026-01-09 20:37:15,632 | INFO     | [monitor] control thread has ended
[2026-01-09 21:37:20] 2026-01-09 20:37:20,546 | INFO     | all workflow threads have been joined
[2026-01-09 21:37:20] 2026-01-09 20:37:20,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:37:20] 2026-01-09 20:37:20,547 | INFO     | traces error code: 0
[2026-01-09 21:37:20] 2026-01-09 20:37:20,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:37:20] 2026-01-09 20:37:20,683 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:37:20] 2026-01-09 20:37:20,687 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:37:20] 2026-01-09 20:37:20,697 [wrapper] pilotpid: 6006
[2026-01-09 21:37:20] 2026-01-09 20:37:20,703 [wrapper] Pilot exit status: 0
[2026-01-09 21:37:20] 2026-01-09 20:37:20,730 [wrapper] pandaids: 6963167618
[2026-01-09 21:37:20] 2026-01-09 20:37:20,768 [wrapper] cleanup supervisor_pilot 28966 6007
[2026-01-09 21:37:20] 2026-01-09 20:37:20,774 [wrapper] Test setup, not cleaning
[2026-01-09 21:37:20] 2026-01-09 20:37:20,777 [wrapper] apfmon messages muted
[2026-01-09 21:37:20] 2026-01-09 20:37:20,783 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:37:20] 2026-01-09 20:37:20,789 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:37:20]  *** Error codes and diagnostics ***
[2026-01-09 21:37:20]     "exeErrorCode": 0,
[2026-01-09 21:37:20]     "exeErrorDiag": "",
[2026-01-09 21:37:20]     "pilotErrorCode": 0,
[2026-01-09 21:37:20]     "pilotErrorDiag": "",
[2026-01-09 21:37:20]  *** Listing of results directory ***
[2026-01-09 21:37:20] total 440224
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 21:37:20] -rwx------. 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:59 queuedata.json
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc       100 Jan  9 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:37:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 19:01 run_atlas
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc       105 Jan  9 19:01 job.xml
[2026-01-09 21:37:20] -rw-r--r--. 2 boinc boinc 224489145 Jan  9 19:01 EVNT.47898824._001333.pool.root.1
[2026-01-09 21:37:20] -rw-r--r--. 2 boinc boinc     15847 Jan  9 19:01 start_atlas.sh
[2026-01-09 21:37:20] drwxrwx--x. 2 boinc boinc        68 Jan  9 19:01 shared
[2026-01-09 21:37:20] -rw-r--r--. 2 boinc boinc    592398 Jan  9 19:01 input.tar.gz
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc      6390 Jan  9 19:01 init_data.xml
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc         0 Jan  9 19:01 boinc_lockfile
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc      2519 Jan  9 19:01 pandaJob.out
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc    989356 Jan  9 19:01 agis_schedconf.cvmfs.json
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc   1516240 Jan  9 19:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:37:20] drwx------. 5 boinc boinc      4096 Jan  9 19:02 pilot3
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc 219145868 Jan  9 21:35 HITS.47898826._035859.pool.root.1
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc       530 Jan  9 21:35 boinc_task_state.xml
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc      1010 Jan  9 21:36 memory_monitor_summary.json
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc    383380 Jan  9 21:36 log.47898826._035859.job.log.tgz.1
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc      7768 Jan  9 21:36 heartbeat.json
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc      8192 Jan  9 21:36 boinc_mmap_file
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc        27 Jan  9 21:36 wrapper_checkpoint.txt
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc        95 Jan  9 21:36 pilot_heartbeat.json
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc      4808 Jan  9 21:37 pilotlog.txt
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc   1244141 Jan  9 21:37 log.47898826._035859.job.log.1
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc       357 Jan  9 21:37 output.list
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc       620 Jan  9 21:37 runtime_log
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc   1648640 Jan  9 21:37 result.tar.gz
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc      8816 Jan  9 21:37 runtime_log.err
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc       652 Jan  9 21:37 3djMDmpzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEcgKDmNoGl5n.diag
[2026-01-09 21:37:20] -rw-r--r--. 1 boinc boinc     20762 Jan  9 21:37 stderr.txt
[2026-01-09 21:37:20] HITS file was successfully produced:
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc 219145868 Jan  9 21:35 shared/HITS.pool.root.1
[2026-01-09 21:37:20]  *** Contents of shared directory: ***
[2026-01-09 21:37:20] total 435448
[2026-01-09 21:37:20] -rw-r--r--. 2 boinc boinc 224489145 Jan  9 19:01 ATLAS.root_0
[2026-01-09 21:37:20] -rw-r--r--. 2 boinc boinc     15847 Jan  9 19:01 start_atlas.sh
[2026-01-09 21:37:20] -rw-r--r--. 2 boinc boinc    592398 Jan  9 19:01 input.tar.gz
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc 219145868 Jan  9 21:35 HITS.pool.root.1
[2026-01-09 21:37:20] -rw-------. 1 boinc boinc   1648640 Jan  9 21:37 result.tar.gz
21:37:22 (2286): run_atlas exited; CPU time 67950.522657
21:37:22 (2286): called boinc_finish(0)

</stderr_txt>
]]>

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