Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
20:48:30 (953509): wrapper (7.7.26015): starting
20:48:30 (953509): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 20:48:30] Arguments: --nthreads 4
[2026-01-09 20:48:30] Threads: 4
[2026-01-09 20:48:30] Checking for CVMFS
[2026-01-09 20:48:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:48:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:48:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:48:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:48:30] 2.12.7.0 9761 500 50232 154955 3 188 3803620 6144000 3761 130560 0 2415501 99.998 20598 847 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 20:48:30] CVMFS is ok
[2026-01-09 20:48:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:48:30] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 20:48:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 20:48:30] Further information can be found at the LHC@home message board.
[2026-01-09 20:48:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:48:30] Checking for apptainer binary...
[2026-01-09 20:48:30] apptainer is not installed, using version from CVMFS
[2026-01-09 20:48:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:48:30] biggy
[2026-01-09 20:48:30] apptainer works
[2026-01-09 20:48:30] Set ATHENA_PROC_NUMBER=4
[2026-01-09 20:48:30] Set ATHENA_CORE_NUMBER=4
[2026-01-09 20:48:30] Starting ATLAS job with PandaID=6963167974
[2026-01-09 20:48:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:26:51]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:26:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-09 22:26:51]  is_altstaged=None
[2026-01-09 22:26:51]  is_tar=False
[2026-01-09 22:26:51]  lfn=log.47898826._036176.job.log.tgz.1
[2026-01-09 22:26:51]  mtime=0
[2026-01-09 22:26:51]  protocol_id=None
[2026-01-09 22:26:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 22:26:51]  replicas=None
[2026-01-09 22:26:51]  scope=mc23_13p6TeV
[2026-01-09 22:26:51]  status=None
[2026-01-09 22:26:51]  status_code=0
[2026-01-09 22:26:51]  storage_token=
[2026-01-09 22:26:51]  surl=/single_8TB/boinc-client/slots/12/PanDA_Pilot-6963167974/log.47898826._036176.job.log.tgz.1
[2026-01-09 22:26:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/e6/log.47898826._036176.job.log.tgz.1
[2026-01-09 22:26:51]  workdir=None
[2026-01-09 22:26:51] ]
[2026-01-09 22:26:51] 2026-01-09 21:25:49,877 | INFO     | transferring file log.47898826._036176.job.log.tgz.1 from /single_8TB/boinc-client/slots/12/PanDA_Pilot-6963167974/log.47898826._036176.job.log.tgz.1 to /single_8T
[2026-01-09 22:26:51] 2026-01-09 21:25:49,877 | INFO     | executing command: /usr/bin/env mv /single_8TB/boinc-client/slots/12/PanDA_Pilot-6963167974/log.47898826._036176.job.log.tgz.1 /single_8TB/boinc-client/slots/12/lo
[2026-01-09 22:26:51] 2026-01-09 21:25:49,889 | INFO     | adding to output.list: log.47898826._036176.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/e6/log.47898826._036176.job.log.tg
[2026-01-09 22:26:51] 2026-01-09 21:25:49,890 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 22:26:51] 2026-01-09 21:25:49,890 | INFO     | summary of transferred files:
[2026-01-09 22:26:51] 2026-01-09 21:25:49,890 | INFO     |  -- lfn=log.47898826._036176.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 22:26:51] 2026-01-09 21:25:49,890 | INFO     | stage-out finished correctly
[2026-01-09 22:26:51] 2026-01-09 21:25:49,928 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 22:26:51] 2026-01-09 21:25:50,045 | INFO     | time since job start (5834s) is within the limit (349056.0s)
[2026-01-09 22:26:51] 2026-01-09 21:25:50,462 | INFO     | job 6963167974 has state=finished
[2026-01-09 22:26:51] 2026-01-09 21:25:50,463 | INFO     | preparing for final server update for job 6963167974 in state='finished'
[2026-01-09 22:26:51] 2026-01-09 21:25:50,463 | INFO     | this job has now completed (state=finished)
[2026-01-09 22:26:51] 2026-01-09 21:25:50,463 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 22:26:51] 2026-01-09 21:25:50,463 | INFO     | log transfer has been attempted: DONE
[2026-01-09 22:26:51] 2026-01-09 21:25:50,463 | INFO     | job 6963167974 has finished - writing final server update
[2026-01-09 22:26:51] 2026-01-09 21:25:50,463 | INFO     | total number of processed events: 400 (read)
[2026-01-09 22:26:51] 2026-01-09 21:25:50,464 | INFO     | executing command: lscpu
[2026-01-09 22:26:51] 2026-01-09 21:25:50,482 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 22:26:51] 2026-01-09 21:25:51,656 | INFO     | monitor loop #443: job 0:6963167974 is in state 'finished'
[2026-01-09 22:26:51] 2026-01-09 21:25:51,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:26:51] 2026-01-09 21:25:52,050 | INFO     | time since job start (5836s) is within the limit (349056.0s)
[2026-01-09 22:26:51] 2026-01-09 21:25:52,317 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 22:26:51] 2026-01-09 21:25:52,321 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5309.420437499999
[2026-01-09 22:26:51] 2026-01-09 21:25:52,323 | INFO     | using path: /single_8TB/boinc-client/slots/12/PanDA_Pilot-6963167974/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:26:51] 2026-01-09 21:25:52,324 | INFO     | extracted standard info from prmon json
[2026-01-09 22:26:51] 2026-01-09 21:25:52,324 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:26:51] 2026-01-09 21:25:52,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:26:51] 2026-01-09 21:25:52,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:26:51] 2026-01-09 21:25:52,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:26:51] 2026-01-09 21:25:52,325 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:26:51] 2026-01-09 21:25:52,325 | INFO     | sum of square deviations: 218571540.0
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | sum of deviations: -1790672933.9999998
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | mean x: 1767991123.0
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | mean y: 2341572.5393258426
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | intersect: 14486815861.865211
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | chi2: 0.0047844504367766895
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | current memory leak: -8.19 B/s (using 89 data points, chi2=0.00)
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | could have reported an average CPU frequency of 5339 MHz (7 samples)
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | ..............................
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | . Timing measurements:
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | . get job = 0 s
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | . initial setup = 1 s
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | . payload setup = 2 s
[2026-01-09 22:26:51] 2026-01-09 21:25:52,326 | INFO     | . stage-in = 0 s
[2026-01-09 22:26:51] 2026-01-09 21:25:52,327 | INFO     | . payload execution = 5813 s
[2026-01-09 22:26:51] 2026-01-09 21:25:52,327 | INFO     | . stage-out = 0 s
[2026-01-09 22:26:51] 2026-01-09 21:25:52,327 | INFO     | . log creation = 0 s
[2026-01-09 22:26:51] 2026-01-09 21:25:52,327 | INFO     | ..............................
[2026-01-09 22:26:51] 2026-01-09 21:25:52,370 | INFO     | 
[2026-01-09 22:26:51] 2026-01-09 21:25:52,370 | INFO     | job summary report
[2026-01-09 22:26:51] 2026-01-09 21:25:52,370 | INFO     | --------------------------------------------------
[2026-01-09 22:26:51] 2026-01-09 21:25:52,370 | INFO     | PanDA job id: 6963167974
[2026-01-09 22:26:51] 2026-01-09 21:25:52,370 | INFO     | task id: 47898826
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | errors: (none)
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | pilot state: finished 
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | transexitcode: 0
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | exeerrorcode: 0
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | exeerrordiag: 
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | exitcode: 0
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | exitmsg: OK
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | cpuconsumptiontime: 22386 s
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | nevents: 400
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | neventsw: 0
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | pid: 977275
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | pgrp: 977275
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | corecount: 4
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | event service: False
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | sizes: {0: 2283866, 1: 2284008, 3: 2284270, 11: 2284298, 5820: 2311128, 5821: 2320332, 5823: 2320470}
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | --------------------------------------------------
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | 
[2026-01-09 22:26:51] 2026-01-09 21:25:52,371 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/12
[2026-01-09 22:26:51] 2026-01-09 21:25:52,383 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | job 6963167974 has completed (purged errors)
[2026-01-09 22:26:51] 2026-01-09 21:25:52,384 | INFO     | overall cleanup function is called
[2026-01-09 22:26:51] 2026-01-09 21:25:53,390 | INFO     | --- collectZombieJob: --- 10, [977275]
[2026-01-09 22:26:51] 2026-01-09 21:25:53,391 | INFO     | zombie collector waiting for pid 977275
[2026-01-09 22:26:51] 2026-01-09 21:25:53,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:26:51] 2026-01-09 21:25:53,391 | INFO     | collected zombie processes
[2026-01-09 22:26:51] 2026-01-09 21:25:53,391 | INFO     | will attempt to kill all subprocesses of pid=977275
[2026-01-09 22:26:51] 2026-01-09 21:25:53,605 | INFO     | process IDs to be killed: [977275] (in reverse order)
[2026-01-09 22:26:51] 2026-01-09 21:25:53,688 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:26:51] 2026-01-09 21:25:53,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:26:51] 2026-01-09 21:25:53,695 | INFO     | did not find any defunct processes belonging to 977275
[2026-01-09 22:26:51] 2026-01-09 21:25:53,701 | INFO     | did not find any defunct processes belonging to 977275
[2026-01-09 22:26:51] 2026-01-09 21:25:53,701 | INFO     | ready for new job
[2026-01-09 22:26:51] 2026-01-09 21:25:53,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:26:51] 2026-01-09 21:25:53,702 | INFO     | ***************************************
[2026-01-09 22:26:51] 2026-01-09 21:25:53,702 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:26:51] 2026-01-09 21:25:53,702 | INFO     | ***************************************
[2026-01-09 22:26:51] 2026-01-09 21:25:53,702 | INFO     | 
[2026-01-09 22:26:51] 2026-01-09 21:25:53,703 | INFO     | architecture information:
[2026-01-09 22:26:51] 2026-01-09 21:25:53,703 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:26:51] 2026-01-09 21:25:53,717 | INFO     | cat /etc/os-release:
[2026-01-09 22:26:51] NAME="CentOS Linux"
[2026-01-09 22:26:51] VERSION="7 (Core)"
[2026-01-09 22:26:51] ID="centos"
[2026-01-09 22:26:51] ID_LIKE="rhel fedora"
[2026-01-09 22:26:51] VERSION_ID="7"
[2026-01-09 22:26:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:26:51] ANSI_COLOR="0;31"
[2026-01-09 22:26:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:26:51] HOME_URL="https://www.centos.org/"
[2026-01-09 22:26:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:26:51] 
[2026-01-09 22:26:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:26:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:26:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:26:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:26:51] 
[2026-01-09 22:26:51] 2026-01-09 21:25:53,718 | INFO     | ***************************************
[2026-01-09 22:26:51] 2026-01-09 21:25:54,220 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/12
[2026-01-09 22:26:51] 2026-01-09 21:25:54,230 | INFO     | sufficient remaining disk space (3325786324992 B)
[2026-01-09 22:26:51] 2026-01-09 21:25:54,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:26:51] 2026-01-09 21:25:54,230 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:26:51] 2026-01-09 21:25:54,230 | INFO     | update_server=False
[2026-01-09 22:26:51] 2026-01-09 21:25:54,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:26:51] 2026-01-09 21:25:54,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:26:51] 2026-01-09 21:25:55,084 | INFO     | all job control threads have been joined
[2026-01-09 22:26:51] 2026-01-09 21:25:55,149 | INFO     | all data control threads have been joined
[2026-01-09 22:26:51] 2026-01-09 21:25:55,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:26:51] 2026-01-09 21:25:55,164 | INFO     | aborting loop
[2026-01-09 22:26:51] 2026-01-09 21:25:55,234 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:55,235 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:55,375 | INFO     | all payload control threads have been joined
[2026-01-09 22:26:51] 2026-01-09 21:25:55,431 | INFO     | [job] validate thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:55,436 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:26:51] 2026-01-09 21:25:55,530 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:55,681 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:55,776 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:55,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:26:51] 2026-01-09 21:25:56,016 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:56,089 | INFO     | [job] control thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:56,122 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:56,152 | INFO     | [data] control thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:56,169 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:56,380 | INFO     | [payload] control thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:56,456 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:57,441 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:25:59,975 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:26:04,480 | INFO     | job.realtimelogging is not enabled
[2026-01-09 22:26:51] 2026-01-09 21:26:05,486 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:26:51] 2026-01-09 21:26:25,256 | INFO     | PID=959473 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 22:26:51] 2026-01-09 21:26:25,256 | INFO     | .. there are 6 such processes running
[2026-01-09 22:26:51] 2026-01-09 21:26:25,256 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:26:51] 2026-01-09 21:26:25,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:26:51] 2026-01-09 21:26:25,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:26:51] 2026-01-09 21:26:45,498 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:26:51] 2026-01-09 21:26:45,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138893155198784)>', '<ExcThread(monitor, started 138892757935872)>']
[2026-01-09 22:26:51] 2026-01-09 21:26:46,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:26:51] 2026-01-09 21:26:46,353 | INFO     | [monitor] control thread has ended
[2026-01-09 22:26:51] 2026-01-09 21:26:51,016 | INFO     | all workflow threads have been joined
[2026-01-09 22:26:51] 2026-01-09 21:26:51,017 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:26:51] 2026-01-09 21:26:51,017 | INFO     | traces error code: 0
[2026-01-09 22:26:51] 2026-01-09 21:26:51,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:26:51] 2026-01-09 21:26:51,095 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:26:51] 2026-01-09 21:26:51,096 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:26:51] 2026-01-09 21:26:51,098 [wrapper] pilotpid: 959473
[2026-01-09 22:26:51] 2026-01-09 21:26:51,100 [wrapper] Pilot exit status: 0
[2026-01-09 22:26:51] 2026-01-09 21:26:51,109 [wrapper] pandaids: 6963167974
[2026-01-09 22:26:51] 2026-01-09 21:26:51,144 [wrapper] cleanup supervisor_pilot 1072366 959474
[2026-01-09 22:26:51] 2026-01-09 21:26:51,146 [wrapper] Test setup, not cleaning
[2026-01-09 22:26:51] 2026-01-09 21:26:51,147 [wrapper] apfmon messages muted
[2026-01-09 22:26:51] 2026-01-09 21:26:51,148 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:26:51] 2026-01-09 21:26:51,150 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:26:51]  *** Error codes and diagnostics ***
[2026-01-09 22:26:51]     "exeErrorCode": 0,
[2026-01-09 22:26:51]     "exeErrorDiag": "",
[2026-01-09 22:26:51]     "pilotErrorCode": 0,
[2026-01-09 22:26:51]     "pilotErrorDiag": "",
[2026-01-09 22:26:51]  *** Listing of results directory ***
[2026-01-09 22:26:51] total 443824
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 22:26:51] -rwx------ 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:59 queuedata.json
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc       105 Jan  9 20:48 job.xml
[2026-01-09 22:26:51] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 20:48 run_atlas
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc       100 Jan  9 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:26:51] -rw-r--r-- 2 boinc boinc 225184492 Jan  9 20:48 EVNT.47898824._001386.pool.root.1
[2026-01-09 22:26:51] -rw-r--r-- 2 boinc boinc    592399 Jan  9 20:48 input.tar.gz
[2026-01-09 22:26:51] drwxrwx--x 2 boinc boinc         5 Jan  9 20:48 shared
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc     10106 Jan  9 20:48 init_data.xml
[2026-01-09 22:26:51] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:48 start_atlas.sh
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:48 boinc_setup_complete
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc         0 Jan  9 20:48 boinc_lockfile
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc      2519 Jan  9 20:48 pandaJob.out
[2026-01-09 22:26:51] -rw------- 1 boinc boinc    989364 Jan  9 20:48 agis_schedconf.cvmfs.json
[2026-01-09 22:26:51] -rw------- 1 boinc boinc   1516240 Jan  9 20:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:26:51] drwx------ 5 boinc boinc        22 Jan  9 20:48 pilot3
[2026-01-09 22:26:51] -rw------- 1 boinc boinc 223777296 Jan  9 22:25 HITS.47898826._036176.pool.root.1
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc       529 Jan  9 22:25 boinc_task_state.xml
[2026-01-09 22:26:51] -rw------- 1 boinc boinc        95 Jan  9 22:25 pilot_heartbeat.json
[2026-01-09 22:26:51] -rw------- 1 boinc boinc      1034 Jan  9 22:25 memory_monitor_summary.json
[2026-01-09 22:26:51] -rw------- 1 boinc boinc    271270 Jan  9 22:25 log.47898826._036176.job.log.tgz.1
[2026-01-09 22:26:51] -rw------- 1 boinc boinc      7762 Jan  9 22:25 heartbeat.json
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc      8192 Jan  9 22:26 boinc_mmap_file
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc        27 Jan  9 22:26 wrapper_checkpoint.txt
[2026-01-09 22:26:51] -rw------- 1 boinc boinc      4907 Jan  9 22:26 pilotlog.txt
[2026-01-09 22:26:51] -rw------- 1 boinc boinc    869702 Jan  9 22:26 log.47898826._036176.job.log.1
[2026-01-09 22:26:51] -rw------- 1 boinc boinc       357 Jan  9 22:26 output.list
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc       620 Jan  9 22:26 runtime_log
[2026-01-09 22:26:51] -rw------- 1 boinc boinc   1157120 Jan  9 22:26 result.tar.gz
[2026-01-09 22:26:51] -rw------- 1 boinc boinc       652 Jan  9 22:26 3Q2LDmB0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfslKDmxsWvKm.diag
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc      8955 Jan  9 22:26 runtime_log.err
[2026-01-09 22:26:51] -rw-r--r-- 1 boinc boinc     21550 Jan  9 22:26 stderr.txt
[2026-01-09 22:26:51] HITS file was successfully produced:
[2026-01-09 22:26:51] -rw------- 1 boinc boinc 223777296 Jan  9 22:25 shared/HITS.pool.root.1
[2026-01-09 22:26:51]  *** Contents of shared directory: ***
[2026-01-09 22:26:51] total 439416
[2026-01-09 22:26:51] -rw-r--r-- 2 boinc boinc 225184492 Jan  9 20:48 ATLAS.root_0
[2026-01-09 22:26:51] -rw-r--r-- 2 boinc boinc    592399 Jan  9 20:48 input.tar.gz
[2026-01-09 22:26:51] -rw-r--r-- 2 boinc boinc     15847 Jan  9 20:48 start_atlas.sh
[2026-01-09 22:26:51] -rw------- 1 boinc boinc 223777296 Jan  9 22:25 HITS.pool.root.1
[2026-01-09 22:26:51] -rw------- 1 boinc boinc   1157120 Jan  9 22:26 result.tar.gz
22:26:52 (953509): run_atlas exited; CPU time 22442.958819
22:26:52 (953509): called boinc_finish(0)

</stderr_txt>
]]>

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