Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
22:10:55 (1048035): wrapper (7.7.26015): starting
22:10:55 (1048035): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 22:10:55] Arguments: --nthreads 4
[2026-01-09 22:10:55] Threads: 4
[2026-01-09 22:10:55] Checking for CVMFS
[2026-01-09 22:10:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:10:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:10:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:10:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:10:55] 2.12.7.0 9761 583 50532 154956 1 187 3816196 6144001 4546 130560 0 2646438 99.998 22048 878 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 22:10:55] CVMFS is ok
[2026-01-09 22:10:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 22:10:55] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 22:10:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 22:10:55] Further information can be found at the LHC@home message board.
[2026-01-09 22:10:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:10:55] Checking for apptainer binary...
[2026-01-09 22:10:55] apptainer is not installed, using version from CVMFS
[2026-01-09 22:10:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:10:55] biggy
[2026-01-09 22:10:55] apptainer works
[2026-01-09 22:10:55] Set ATHENA_PROC_NUMBER=4
[2026-01-09 22:10:55] Set ATHENA_CORE_NUMBER=4
[2026-01-09 22:10:55] Starting ATLAS job with PandaID=6963167927
[2026-01-09 22:10:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:44:25]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:44:25]  is_tar=False
[2026-01-09 23:44:25]  lfn=log.47898826._036129.job.log.tgz.1
[2026-01-09 23:44:25]  mtime=0
[2026-01-09 23:44:25]  protocol_id=None
[2026-01-09 23:44:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 23:44:25]  replicas=None
[2026-01-09 23:44:25]  scope=mc23_13p6TeV
[2026-01-09 23:44:25]  status=None
[2026-01-09 23:44:25]  status_code=0
[2026-01-09 23:44:25]  storage_token=
[2026-01-09 23:44:25]  surl=/single_8TB/boinc-client/slots/9/PanDA_Pilot-6963167927/log.47898826._036129.job.log.tgz.1
[2026-01-09 23:44:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/87/log.47898826._036129.job.log.tgz.1
[2026-01-09 23:44:25]  workdir=None
[2026-01-09 23:44:25] ]
[2026-01-09 23:44:25] 2026-01-09 22:43:48,365 | INFO     | transferring file log.47898826._036129.job.log.tgz.1 from /single_8TB/boinc-client/slots/9/PanDA_Pilot-6963167927/log.47898826._036129.job.log.tgz.1 to /single_8TB
[2026-01-09 23:44:25] 2026-01-09 22:43:48,366 | INFO     | executing command: /usr/bin/env mv /single_8TB/boinc-client/slots/9/PanDA_Pilot-6963167927/log.47898826._036129.job.log.tgz.1 /single_8TB/boinc-client/slots/9/log.
[2026-01-09 23:44:25] 2026-01-09 22:43:48,377 | INFO     | adding to output.list: log.47898826._036129.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/87/log.47898826._036129.job.log.tg
[2026-01-09 23:44:25] 2026-01-09 22:43:48,377 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 23:44:25] 2026-01-09 22:43:48,377 | INFO     | summary of transferred files:
[2026-01-09 23:44:25] 2026-01-09 22:43:48,377 | INFO     |  -- lfn=log.47898826._036129.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 23:44:25] 2026-01-09 22:43:48,377 | INFO     | stage-out finished correctly
[2026-01-09 23:44:25] 2026-01-09 22:43:48,753 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 23:44:25] 2026-01-09 22:43:50,128 | INFO     | time since job start (5569s) is within the limit (349056.0s)
[2026-01-09 23:44:25] 2026-01-09 22:43:50,652 | INFO     | monitor loop #423: job 0:6963167927 is in state 'finished'
[2026-01-09 23:44:25] 2026-01-09 22:43:50,653 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:44:25] 2026-01-09 22:43:51,145 | INFO     | job 6963167927 has state=finished
[2026-01-09 23:44:25] 2026-01-09 22:43:51,145 | INFO     | preparing for final server update for job 6963167927 in state='finished'
[2026-01-09 23:44:25] 2026-01-09 22:43:51,837 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-09 23:44:25] 2026-01-09 22:43:51,838 | INFO     | this job has now completed (state=finished)
[2026-01-09 23:44:25] 2026-01-09 22:43:51,838 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 23:44:25] 2026-01-09 22:43:51,838 | INFO     | log transfer has been attempted: DONE
[2026-01-09 23:44:25] 2026-01-09 22:43:51,839 | INFO     | job 6963167927 has finished - writing final server update
[2026-01-09 23:44:25] 2026-01-09 22:43:51,839 | INFO     | total number of processed events: 400 (read)
[2026-01-09 23:44:25] 2026-01-09 22:43:51,841 | INFO     | executing command: lscpu
[2026-01-09 23:44:25] 2026-01-09 22:43:51,861 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 23:44:25] 2026-01-09 22:43:52,134 | INFO     | time since job start (5571s) is within the limit (349056.0s)
[2026-01-09 23:44:25] 2026-01-09 22:43:53,156 | INFO     | monitor loop #424: job 0:6963167927 is in state 'finished'
[2026-01-09 23:44:25] 2026-01-09 22:43:53,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:44:25] 2026-01-09 22:43:54,014 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 23:44:25] 2026-01-09 22:43:54,016 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5343.27359375
[2026-01-09 23:44:25] 2026-01-09 22:43:54,019 | INFO     | using path: /single_8TB/boinc-client/slots/9/PanDA_Pilot-6963167927/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:44:25] 2026-01-09 22:43:54,020 | INFO     | extracted standard info from prmon json
[2026-01-09 23:44:25] 2026-01-09 22:43:54,020 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:44:25] 2026-01-09 22:43:54,020 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:44:25] 2026-01-09 22:43:54,020 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:44:25] 2026-01-09 22:43:54,020 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:44:25] 2026-01-09 22:43:54,021 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:44:25] 2026-01-09 22:43:54,021 | INFO     | sum of square deviations: 183761585.0
[2026-01-09 23:44:25] 2026-01-09 22:43:54,021 | INFO     | sum of deviations: 231940513.5
[2026-01-09 23:44:25] 2026-01-09 22:43:54,021 | INFO     | mean x: 1767995915.5
[2026-01-09 23:44:25] 2026-01-09 22:43:54,021 | INFO     | mean y: 2314427.25
[2026-01-09 23:44:25] 2026-01-09 22:43:54,021 | INFO     | intersect: -2229217699.048174
[2026-01-09 23:44:25] 2026-01-09 22:43:54,021 | INFO     | chi2: 0.0061130140523739706
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | current memory leak: 1.26 B/s (using 84 data points, chi2=0.01)
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | could have reported an average CPU frequency of 5338 MHz (7 samples)
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | ..............................
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | . Timing measurements:
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | . get job = 0 s
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | . initial setup = 1 s
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | . payload setup = 2 s
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | . stage-in = 0 s
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | . payload execution = 5547 s
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | . stage-out = 0 s
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | . log creation = 0 s
[2026-01-09 23:44:25] 2026-01-09 22:43:54,022 | INFO     | ..............................
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | 
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | job summary report
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | --------------------------------------------------
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | PanDA job id: 6963167927
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | task id: 47898826
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | errors: (none)
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | pilot state: finished 
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | transexitcode: 0
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | exeerrorcode: 0
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | exeerrordiag: 
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | exitcode: 0
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | exitmsg: OK
[2026-01-09 23:44:25] 2026-01-09 22:43:54,062 | INFO     | cpuconsumptiontime: 21578 s
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | nevents: 400
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | neventsw: 0
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | pid: 1058563
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | pgrp: 1058563
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | corecount: 4
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | event service: False
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | sizes: {0: 2283980, 3: 2284242, 11: 2284270, 5553: 2311017, 5554: 2320035, 5555: 2320091, 5560: 2320413}
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | --------------------------------------------------
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | 
[2026-01-09 23:44:25] 2026-01-09 22:43:54,063 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/9
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | job 6963167927 has completed (purged errors)
[2026-01-09 23:44:25] 2026-01-09 22:43:54,075 | INFO     | overall cleanup function is called
[2026-01-09 23:44:25] 2026-01-09 22:43:55,079 | INFO     | --- collectZombieJob: --- 10, [1058563]
[2026-01-09 23:44:25] 2026-01-09 22:43:55,080 | INFO     | zombie collector waiting for pid 1058563
[2026-01-09 23:44:25] 2026-01-09 22:43:55,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:44:25] 2026-01-09 22:43:55,080 | INFO     | collected zombie processes
[2026-01-09 23:44:25] 2026-01-09 22:43:55,080 | INFO     | will attempt to kill all subprocesses of pid=1058563
[2026-01-09 23:44:25] 2026-01-09 22:43:55,207 | INFO     | process IDs to be killed: [1058563] (in reverse order)
[2026-01-09 23:44:25] 2026-01-09 22:43:55,253 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:44:25] 2026-01-09 22:43:55,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:44:25] 2026-01-09 22:43:55,258 | INFO     | did not find any defunct processes belonging to 1058563
[2026-01-09 23:44:25] 2026-01-09 22:43:55,261 | INFO     | did not find any defunct processes belonging to 1058563
[2026-01-09 23:44:25] 2026-01-09 22:43:55,262 | INFO     | ready for new job
[2026-01-09 23:44:25] 2026-01-09 22:43:55,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:44:25] 2026-01-09 22:43:55,262 | INFO     | ***************************************
[2026-01-09 23:44:25] 2026-01-09 22:43:55,262 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:44:25] 2026-01-09 22:43:55,263 | INFO     | ***************************************
[2026-01-09 23:44:25] 2026-01-09 22:43:55,263 | INFO     | 
[2026-01-09 23:44:25] 2026-01-09 22:43:55,263 | INFO     | architecture information:
[2026-01-09 23:44:25] 2026-01-09 22:43:55,264 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:44:25] 2026-01-09 22:43:55,273 | INFO     | cat /etc/os-release:
[2026-01-09 23:44:25] NAME="CentOS Linux"
[2026-01-09 23:44:25] VERSION="7 (Core)"
[2026-01-09 23:44:25] ID="centos"
[2026-01-09 23:44:25] ID_LIKE="rhel fedora"
[2026-01-09 23:44:25] VERSION_ID="7"
[2026-01-09 23:44:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:44:25] ANSI_COLOR="0;31"
[2026-01-09 23:44:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:44:25] HOME_URL="https://www.centos.org/"
[2026-01-09 23:44:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:44:25] 
[2026-01-09 23:44:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:44:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:44:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:44:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:44:25] 
[2026-01-09 23:44:25] 2026-01-09 22:43:55,273 | INFO     | ***************************************
[2026-01-09 23:44:25] 2026-01-09 22:43:55,776 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/9
[2026-01-09 23:44:25] 2026-01-09 22:43:55,788 | INFO     | sufficient remaining disk space (3322729725952 B)
[2026-01-09 23:44:25] 2026-01-09 22:43:55,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:44:25] 2026-01-09 22:43:55,788 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:44:25] 2026-01-09 22:43:55,789 | INFO     | update_server=False
[2026-01-09 23:44:25] 2026-01-09 22:43:55,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:44:25] 2026-01-09 22:43:55,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:44:25] 2026-01-09 22:43:55,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:44:25] 2026-01-09 22:43:56,048 | INFO     | all data control threads have been joined
[2026-01-09 23:44:25] 2026-01-09 22:43:56,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:44:25] 2026-01-09 22:43:56,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:44:25] 2026-01-09 22:43:56,664 | INFO     | aborting loop
[2026-01-09 23:44:25] 2026-01-09 22:43:56,793 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:56,794 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:56,814 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:56,934 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:57,053 | INFO     | [data] control thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:57,140 | INFO     | all payload control threads have been joined
[2026-01-09 23:44:25] 2026-01-09 22:43:57,299 | INFO     | [job] validate thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:57,332 | INFO     | all job control threads have been joined
[2026-01-09 23:44:25] 2026-01-09 22:43:57,351 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:57,482 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:57,509 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:57,669 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:57,815 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:58,090 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:58,145 | INFO     | [payload] control thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:58,337 | INFO     | [job] control thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:58,429 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:43:59,793 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:44:25] 2026-01-09 22:44:09,786 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:44:25] 2026-01-09 22:44:11,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131778075166528)>', '<ExcThread(monitor, started 131777087653632)>']
[2026-01-09 23:44:25] 2026-01-09 22:44:16,653 | INFO     | all workflow threads have been joined
[2026-01-09 23:44:25] 2026-01-09 22:44:16,654 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:44:25] 2026-01-09 22:44:16,654 | INFO     | traces error code: 0
[2026-01-09 23:44:25] 2026-01-09 22:44:16,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:44:25] 2026-01-09 22:44:25,335 | INFO     | PID=1051882 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:44:25] 2026-01-09 22:44:25,335 | INFO     | .. there are 6 such processes running
[2026-01-09 23:44:25] 2026-01-09 22:44:25,336 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:44:25] 2026-01-09 22:44:25,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:44:25] 2026-01-09 22:44:25,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:44:25] 2026-01-09 22:44:25,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:44:25] 2026-01-09 22:44:25,336 | INFO     | [monitor] control thread has ended
[2026-01-09 23:44:25] 2026-01-09 22:44:25,548 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:44:25] 2026-01-09 22:44:25,550 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:44:25] 2026-01-09 22:44:25,552 [wrapper] pilotpid: 1051882
[2026-01-09 23:44:25] 2026-01-09 22:44:25,553 [wrapper] Pilot exit status: 0
[2026-01-09 23:44:25] 2026-01-09 22:44:25,558 [wrapper] pandaids: 6963167927
[2026-01-09 23:44:25] 2026-01-09 22:44:25,589 [wrapper] cleanup supervisor_pilot 1192179 1051883
[2026-01-09 23:44:25] 2026-01-09 22:44:25,590 [wrapper] Test setup, not cleaning
[2026-01-09 23:44:25] 2026-01-09 22:44:25,592 [wrapper] apfmon messages muted
[2026-01-09 23:44:25] 2026-01-09 22:44:25,593 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:44:25] 2026-01-09 22:44:25,594 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:44:25]  *** Error codes and diagnostics ***
[2026-01-09 23:44:25]     "exeErrorCode": 0,
[2026-01-09 23:44:25]     "exeErrorDiag": "",
[2026-01-09 23:44:25]     "pilotErrorCode": 0,
[2026-01-09 23:44:25]     "pilotErrorDiag": "",
[2026-01-09 23:44:25]  *** Listing of results directory ***
[2026-01-09 23:44:25] total 433296
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 23:44:25] -rwx------ 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:59 queuedata.json
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc       100 Jan  9 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc       105 Jan  9 22:10 job.xml
[2026-01-09 23:44:25] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 22:10 run_atlas
[2026-01-09 23:44:25] -rw-r--r-- 2 boinc boinc 222352661 Jan  9 22:10 EVNT.47898824._001344.pool.root.1
[2026-01-09 23:44:25] -rw-r--r-- 2 boinc boinc    592395 Jan  9 22:10 input.tar.gz
[2026-01-09 23:44:25] drwxrwx--x 2 boinc boinc         5 Jan  9 22:10 shared
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc     10105 Jan  9 22:10 init_data.xml
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc         0 Jan  9 22:10 boinc_setup_complete
[2026-01-09 23:44:25] -rw-r--r-- 2 boinc boinc     15847 Jan  9 22:10 start_atlas.sh
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc         0 Jan  9 22:10 boinc_lockfile
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc      2519 Jan  9 22:10 pandaJob.out
[2026-01-09 23:44:25] -rw------- 1 boinc boinc    989381 Jan  9 22:10 agis_schedconf.cvmfs.json
[2026-01-09 23:44:25] -rw------- 1 boinc boinc   1516240 Jan  9 22:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:44:25] drwx------ 5 boinc boinc        22 Jan  9 22:11 pilot3
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc       529 Jan  9 23:43 boinc_task_state.xml
[2026-01-09 23:44:25] -rw------- 1 boinc boinc 215862367 Jan  9 23:43 HITS.47898826._036129.pool.root.1
[2026-01-09 23:44:25] -rw------- 1 boinc boinc      1033 Jan  9 23:43 memory_monitor_summary.json
[2026-01-09 23:44:25] -rw------- 1 boinc boinc    271273 Jan  9 23:43 log.47898826._036129.job.log.tgz.1
[2026-01-09 23:44:25] -rw------- 1 boinc boinc      7744 Jan  9 23:43 heartbeat.json
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc      8192 Jan  9 23:44 boinc_mmap_file
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc        27 Jan  9 23:44 wrapper_checkpoint.txt
[2026-01-09 23:44:25] -rw------- 1 boinc boinc       822 Jan  9 23:44 pilotlog.txt
[2026-01-09 23:44:25] -rw------- 1 boinc boinc        95 Jan  9 23:44 pilot_heartbeat.json
[2026-01-09 23:44:25] -rw------- 1 boinc boinc    834072 Jan  9 23:44 log.47898826._036129.job.log.1
[2026-01-09 23:44:25] -rw------- 1 boinc boinc       357 Jan  9 23:44 output.list
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc       620 Jan  9 23:44 runtime_log
[2026-01-09 23:44:25] -rw------- 1 boinc boinc   1126400 Jan  9 23:44 result.tar.gz
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc      8939 Jan  9 23:44 runtime_log.err
[2026-01-09 23:44:25] -rw------- 1 boinc boinc       651 Jan  9 23:44 AsiLDm1zFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsdgKDmnXNyan.diag
[2026-01-09 23:44:25] -rw-r--r-- 1 boinc boinc     21706 Jan  9 23:44 stderr.txt
[2026-01-09 23:44:25] HITS file was successfully produced:
[2026-01-09 23:44:25] -rw------- 1 boinc boinc 215862367 Jan  9 23:43 shared/HITS.pool.root.1
[2026-01-09 23:44:25]  *** Contents of shared directory: ***
[2026-01-09 23:44:25] total 428928
[2026-01-09 23:44:25] -rw-r--r-- 2 boinc boinc 222352661 Jan  9 22:10 ATLAS.root_0
[2026-01-09 23:44:25] -rw-r--r-- 2 boinc boinc    592395 Jan  9 22:10 input.tar.gz
[2026-01-09 23:44:25] -rw-r--r-- 2 boinc boinc     15847 Jan  9 22:10 start_atlas.sh
[2026-01-09 23:44:25] -rw------- 1 boinc boinc 215862367 Jan  9 23:43 HITS.pool.root.1
[2026-01-09 23:44:25] -rw------- 1 boinc boinc   1126400 Jan  9 23:44 result.tar.gz
23:44:27 (1048035): run_atlas exited; CPU time 21622.706163
23:44:27 (1048035): called boinc_finish(0)

</stderr_txt>
]]>

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