Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:30:17 (13622): wrapper (7.7.26015): starting
18:30:17 (13622): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:30:17] Arguments: --nthreads 8
[2026-01-09 18:30:17] Threads: 8
[2026-01-09 18:30:17] Checking for CVMFS
[2026-01-09 18:30:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:30:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:30:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:30:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:30:18] 2.11.2.0 773 35699 114340 154951 1 56 16618789 25165825 0 130560 0 16124987 99.782 10762831 4180 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 18:30:18] CVMFS is ok
[2026-01-09 18:30:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:30:18] Checking for apptainer binary...
[2026-01-09 18:30:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:30:18] Running /usr/bin/apptainer --version
[2026-01-09 18:30:18] apptainer version 1.3.2-1.el7
[2026-01-09 18:30:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:30:19] cg-vwn384.simple-grid.lan
[2026-01-09 18:30:19] apptainer works
[2026-01-09 18:30:19] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:30:19] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:30:19] Starting ATLAS job with PandaID=6963167168
[2026-01-09 18:30:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:12:14]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:12:14] 2026-01-09 20:11:36,232 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:12:14] 2026-01-09 20:11:37,146 | INFO     | time since job start (9663s) is within the limit (349056.0s)
[2026-01-09 21:12:14] 2026-01-09 20:11:37,291 | INFO     | monitor loop #660: job 0:6963167168 is in state 'finished'
[2026-01-09 21:12:14] 2026-01-09 20:11:37,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:14] 2026-01-09 20:11:39,151 | INFO     | time since job start (9665s) is within the limit (349056.0s)
[2026-01-09 21:12:14] 2026-01-09 20:11:39,794 | INFO     | monitor loop #661: job 0:6963167168 is in state 'finished'
[2026-01-09 21:12:14] 2026-01-09 20:11:39,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:14] 2026-01-09 20:11:41,156 | INFO     | time since job start (9667s) is within the limit (349056.0s)
[2026-01-09 21:12:14] 2026-01-09 20:11:41,769 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:12:14] 2026-01-09 20:11:41,770 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 21:12:14] 2026-01-09 20:11:41,772 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6963167168/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:12:14] 2026-01-09 20:11:41,773 | INFO     | extracted standard info from prmon json
[2026-01-09 21:12:14] 2026-01-09 20:11:41,773 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:12:14] 2026-01-09 20:11:41,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:12:14] 2026-01-09 20:11:41,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:12:14] 2026-01-09 20:11:41,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:12:14] 2026-01-09 20:11:41,777 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:12:14] 2026-01-09 20:11:41,778 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 21:12:14] 2026-01-09 20:11:41,779 | INFO     | sum of deviations: -6823213224.499994
[2026-01-09 21:12:14] 2026-01-09 20:11:41,779 | INFO     | mean x: 1767984652.5
[2026-01-09 21:12:14] 2026-01-09 20:11:41,779 | INFO     | mean y: 2539939.601265823
[2026-01-09 21:12:14] 2026-01-09 20:11:41,779 | INFO     | intersect: 9866132994.699268
[2026-01-09 21:12:14] 2026-01-09 20:11:41,780 | INFO     | chi2: 1.692963128861705
[2026-01-09 21:12:14] 2026-01-09 20:11:41,780 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 21:12:14] 2026-01-09 20:11:41,781 | INFO     | sum of deviations: -6173155592.0
[2026-01-09 21:12:14] 2026-01-09 20:11:41,781 | INFO     | mean x: 1767984500.0
[2026-01-09 21:12:14] 2026-01-09 20:11:41,781 | INFO     | mean y: 2540821.2352941176
[2026-01-09 21:12:14] 2026-01-09 20:11:41,781 | INFO     | intersect: 9830232272.362675
[2026-01-09 21:12:14] 2026-01-09 20:11:41,782 | INFO     | chi2: 1.693038056085436
[2026-01-09 21:12:14] 2026-01-09 20:11:41,782 | INFO     | current chi2=1.693038056085436 (change=-0.00442580363703448 %)
[2026-01-09 21:12:14] 2026-01-09 20:11:41,782 | INFO     | right removable region: 152
[2026-01-09 21:12:14] 2026-01-09 20:11:41,782 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 21:12:14] 2026-01-09 20:11:41,783 | INFO     | sum of deviations: -31416143200.999977
[2026-01-09 21:12:14] 2026-01-09 20:11:41,783 | INFO     | mean x: 1767984805.0
[2026-01-09 21:12:14] 2026-01-09 20:11:41,783 | INFO     | mean y: 2572807.862745098
[2026-01-09 21:12:14] 2026-01-09 20:11:41,784 | INFO     | intersect: 50017222629.25973
[2026-01-09 21:12:14] 2026-01-09 20:11:41,784 | INFO     | chi2: 0.1692088350935792
[2026-01-09 21:12:14] 2026-01-09 20:11:41,784 | INFO     | current chi2=0.1692088350935792 (change=90.0051671410381 %)
[2026-01-09 21:12:14] 2026-01-09 20:11:41,784 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 21:12:14] 2026-01-09 20:11:41,785 | INFO     | sum of deviations: -30870326455.5
[2026-01-09 21:12:14] 2026-01-09 20:11:41,786 | INFO     | mean x: 1767984957.5
[2026-01-09 21:12:14] 2026-01-09 20:11:41,786 | INFO     | mean y: 2571935.060810811
[2026-01-09 21:12:14] 2026-01-09 20:11:41,786 | INFO     | intersect: 54299598253.406944
[2026-01-09 21:12:14] 2026-01-09 20:11:41,786 | INFO     | chi2: 0.14585398033709684
[2026-01-09 21:12:14] 2026-01-09 20:11:41,786 | INFO     | current chi2=0.14585398033709684 (change=13.80238493076688 %)
[2026-01-09 21:12:14] 2026-01-09 20:11:41,786 | INFO     | left removable region: 20
[2026-01-09 21:12:14] 2026-01-09 20:11:41,787 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 21:12:14] 2026-01-09 20:11:41,787 | INFO     | sum of deviations: -21525991984.50002
[2026-01-09 21:12:14] 2026-01-09 20:11:41,788 | INFO     | mean x: 1767985079.5
[2026-01-09 21:12:14] 2026-01-09 20:11:41,788 | INFO     | mean y: 2560853.1742424243
[2026-01-09 21:12:14] 2026-01-09 20:11:41,788 | INFO     | intersect: 53368785245.70895
[2026-01-09 21:12:14] 2026-01-09 20:11:41,788 | INFO     | chi2: 0.13596592325789086
[2026-01-09 21:12:14] 2026-01-09 20:11:41,788 | INFO     | current memory leak: -30.18 B/s (using 132 data points, chi2=0.14)
[2026-01-09 21:12:14] 2026-01-09 20:11:41,789 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 21:12:14] 2026-01-09 20:11:41,789 | INFO     | ..............................
[2026-01-09 21:12:14] 2026-01-09 20:11:41,789 | INFO     | . Timing measurements:
[2026-01-09 21:12:14] 2026-01-09 20:11:41,789 | INFO     | . get job = 0 s
[2026-01-09 21:12:14] 2026-01-09 20:11:41,789 | INFO     | . initial setup = 2 s
[2026-01-09 21:12:14] 2026-01-09 20:11:41,789 | INFO     | . payload setup = 6 s
[2026-01-09 21:12:14] 2026-01-09 20:11:41,790 | INFO     | . stage-in = 0 s
[2026-01-09 21:12:14] 2026-01-09 20:11:41,790 | INFO     | . payload execution = 9628 s
[2026-01-09 21:12:14] 2026-01-09 20:11:41,790 | INFO     | . stage-out = 1 s
[2026-01-09 21:12:14] 2026-01-09 20:11:41,790 | INFO     | . log creation = 0 s
[2026-01-09 21:12:14] 2026-01-09 20:11:41,790 | INFO     | ..............................
[2026-01-09 21:12:14] 2026-01-09 20:11:42,340 | INFO     | 
[2026-01-09 21:12:14] 2026-01-09 20:11:42,340 | INFO     | job summary report
[2026-01-09 21:12:14] 2026-01-09 20:11:42,341 | INFO     | --------------------------------------------------
[2026-01-09 21:12:14] 2026-01-09 20:11:42,341 | INFO     | PanDA job id: 6963167168
[2026-01-09 21:12:14] 2026-01-09 20:11:42,341 | INFO     | task id: 47898826
[2026-01-09 21:12:14] 2026-01-09 20:11:42,341 | INFO     | errors: (none)
[2026-01-09 21:12:14] 2026-01-09 20:11:42,341 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:12:14] 2026-01-09 20:11:42,341 | INFO     | pilot state: finished 
[2026-01-09 21:12:14] 2026-01-09 20:11:42,341 | INFO     | transexitcode: 0
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | exeerrorcode: 0
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | exeerrordiag: 
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | exitcode: 0
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | exitmsg: OK
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | cpuconsumptiontime: 73207 s
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | nevents: 400
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | neventsw: 0
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | pid: 23776
[2026-01-09 21:12:14] 2026-01-09 20:11:42,342 | INFO     | pgrp: 23776
[2026-01-09 21:12:14] 2026-01-09 20:11:42,343 | INFO     | corecount: 8
[2026-01-09 21:12:14] 2026-01-09 20:11:42,343 | INFO     | event service: False
[2026-01-09 21:12:14] 2026-01-09 20:11:42,343 | INFO     | sizes: {0: 2283972, 1: 2284000, 6: 2284262, 11: 2284290, 9638: 2312571, 9639: 2312570, 9641: 2321754, 9644: 2321810, 9651: 2322004}
[2026-01-09 21:12:14] 2026-01-09 20:11:42,343 | INFO     | --------------------------------------------------
[2026-01-09 21:12:14] 2026-01-09 20:11:42,343 | INFO     | 
[2026-01-09 21:12:14] 2026-01-09 20:11:42,343 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-09 21:12:14] 2026-01-09 20:11:42,365 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,365 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,366 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,367 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:12:14] 2026-01-09 20:11:42,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:12:14] 2026-01-09 20:11:42,368 | INFO     | job 6963167168 has completed (purged errors)
[2026-01-09 21:12:14] 2026-01-09 20:11:42,368 | INFO     | overall cleanup function is called
[2026-01-09 21:12:14] 2026-01-09 20:11:43,376 | INFO     | --- collectZombieJob: --- 10, [23776]
[2026-01-09 21:12:14] 2026-01-09 20:11:43,376 | INFO     | zombie collector waiting for pid 23776
[2026-01-09 21:12:14] 2026-01-09 20:11:43,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:12:14] 2026-01-09 20:11:43,377 | INFO     | collected zombie processes
[2026-01-09 21:12:14] 2026-01-09 20:11:43,377 | INFO     | will attempt to kill all subprocesses of pid=23776
[2026-01-09 21:12:14] 2026-01-09 20:11:43,443 | INFO     | process IDs to be killed: [23776] (in reverse order)
[2026-01-09 21:12:14] 2026-01-09 20:11:43,488 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:12:14] 2026-01-09 20:11:43,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:12:14] 2026-01-09 20:11:43,490 | INFO     | did not find any defunct processes belonging to 23776
[2026-01-09 21:12:14] 2026-01-09 20:11:43,492 | INFO     | did not find any defunct processes belonging to 23776
[2026-01-09 21:12:14] 2026-01-09 20:11:43,492 | INFO     | ready for new job
[2026-01-09 21:12:14] 2026-01-09 20:11:43,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:12:14] 2026-01-09 20:11:43,494 | INFO     | ***************************************
[2026-01-09 21:12:14] 2026-01-09 20:11:43,495 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:12:14] 2026-01-09 20:11:43,495 | INFO     | ***************************************
[2026-01-09 21:12:14] 2026-01-09 20:11:43,495 | INFO     | 
[2026-01-09 21:12:14] 2026-01-09 20:11:43,495 | INFO     | pilot is running in a VM
[2026-01-09 21:12:14] 2026-01-09 20:11:43,496 | INFO     | architecture information:
[2026-01-09 21:12:14] 2026-01-09 20:11:43,496 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:12:14] 2026-01-09 20:11:43,518 | INFO     | cat /etc/os-release:
[2026-01-09 21:12:14] NAME="CentOS Linux"
[2026-01-09 21:12:14] VERSION="7 (Core)"
[2026-01-09 21:12:14] ID="centos"
[2026-01-09 21:12:14] ID_LIKE="rhel fedora"
[2026-01-09 21:12:14] VERSION_ID="7"
[2026-01-09 21:12:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:12:14] ANSI_COLOR="0;31"
[2026-01-09 21:12:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:12:14] HOME_URL="https://www.centos.org/"
[2026-01-09 21:12:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:12:14] 
[2026-01-09 21:12:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:12:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:12:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:12:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:12:14] 
[2026-01-09 21:12:14] 2026-01-09 20:11:43,518 | INFO     | ***************************************
[2026-01-09 21:12:14] 2026-01-09 20:11:44,020 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-09 21:12:14] 2026-01-09 20:11:44,038 | INFO     | sufficient remaining disk space (498115543040 B)
[2026-01-09 21:12:14] 2026-01-09 20:11:44,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:12:14] 2026-01-09 20:11:44,039 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:12:14] 2026-01-09 20:11:44,039 | INFO     | update_server=False
[2026-01-09 21:12:14] 2026-01-09 20:11:44,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:12:14] 2026-01-09 20:11:44,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:12:14] 2026-01-09 20:11:44,040 | INFO     | aborting loop
[2026-01-09 21:12:14] 2026-01-09 20:11:44,593 | INFO     | all job control threads have been joined
[2026-01-09 21:12:14] 2026-01-09 20:11:44,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:12:14] 2026-01-09 20:11:45,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:12:14] 2026-01-09 20:11:45,045 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:45,046 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:45,062 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:45,063 | INFO     | all data control threads have been joined
[2026-01-09 21:12:14] 2026-01-09 20:11:45,074 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:45,257 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:45,385 | INFO     | all payload control threads have been joined
[2026-01-09 21:12:14] 2026-01-09 20:11:45,523 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:45,599 | INFO     | [job] control thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:45,691 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:45,999 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:46,050 | INFO     | [job] validate thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:46,070 | INFO     | [data] control thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:46,194 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:46,391 | INFO     | [payload] control thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:46,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:12:14] 2026-01-09 20:11:47,046 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:47,921 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:48,987 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:12:14] 2026-01-09 20:11:49,992 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:12:14] 2026-01-09 20:11:51,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726654822208)>', '<ExcThread(monitor, started 139726048700160)>']
[2026-01-09 21:12:14] 2026-01-09 20:11:56,431 | INFO     | all workflow threads have been joined
[2026-01-09 21:12:14] 2026-01-09 20:11:56,431 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:12:14] 2026-01-09 20:11:56,431 | INFO     | traces error code: 0
[2026-01-09 21:12:14] 2026-01-09 20:11:56,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:12:14] 2026-01-09 20:12:14,249 | INFO     | PID=17347 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 21:12:14] 2026-01-09 20:12:14,249 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:12:14] 2026-01-09 20:12:14,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:12:14] 2026-01-09 20:12:14,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:12:14] 2026-01-09 20:12:14,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:12:14] 2026-01-09 20:12:14,250 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 21:12:14] 2026-01-09 20:12:14,250 | INFO     | [monitor] control thread has ended
[2026-01-09 21:12:14] 2026-01-09 20:12:14,395 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:12:14] 2026-01-09 20:12:14,401 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:12:14] 2026-01-09 20:12:14,409 [wrapper] pilotpid: 17347
[2026-01-09 21:12:14] 2026-01-09 20:12:14,415 [wrapper] Pilot exit status: 0
[2026-01-09 21:12:14] 2026-01-09 20:12:14,452 [wrapper] pandaids: 6963167168
[2026-01-09 21:12:14] 2026-01-09 20:12:14,496 [wrapper] cleanup supervisor_pilot  8161 17348
[2026-01-09 21:12:14] 2026-01-09 20:12:14,501 [wrapper] Test setup, not cleaning
[2026-01-09 21:12:14] 2026-01-09 20:12:14,505 [wrapper] apfmon messages muted
[2026-01-09 21:12:14] 2026-01-09 20:12:14,509 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:12:14] 2026-01-09 20:12:14,513 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:12:14]  *** Error codes and diagnostics ***
[2026-01-09 21:12:14]     "exeErrorCode": 0,
[2026-01-09 21:12:14]     "exeErrorDiag": "",
[2026-01-09 21:12:14]     "pilotErrorCode": 0,
[2026-01-09 21:12:14]     "pilotErrorDiag": "",
[2026-01-09 21:12:14]  *** Listing of results directory ***
[2026-01-09 21:12:14] total 437828
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 21:12:14] -rwx------. 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc       100 Jan  9 18:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:12:14] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 18:30 run_atlas
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc       105 Jan  9 18:30 job.xml
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc      6390 Jan  9 18:30 init_data.xml
[2026-01-09 21:12:14] -rw-r--r--. 2 boinc boinc 225275399 Jan  9 18:30 EVNT.47898824._001377.pool.root.1
[2026-01-09 21:12:14] -rw-r--r--. 2 boinc boinc     15847 Jan  9 18:30 start_atlas.sh
[2026-01-09 21:12:14] drwxrwx--x. 2 boinc boinc        68 Jan  9 18:30 shared
[2026-01-09 21:12:14] -rw-r--r--. 2 boinc boinc    592399 Jan  9 18:30 input.tar.gz
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc         0 Jan  9 18:30 boinc_lockfile
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc      2520 Jan  9 18:30 pandaJob.out
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc    989356 Jan  9 18:30 agis_schedconf.cvmfs.json
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc   1516240 Jan  9 18:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:12:14] drwx------. 5 boinc boinc      4096 Jan  9 18:30 pilot3
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc 215771560 Jan  9 21:10 HITS.47898826._035543.pool.root.1
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc       530 Jan  9 21:11 boinc_task_state.xml
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc      1009 Jan  9 21:11 memory_monitor_summary.json
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc    399419 Jan  9 21:11 log.47898826._035543.job.log.tgz.1
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc        95 Jan  9 21:11 pilot_heartbeat.json
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc      7766 Jan  9 21:11 heartbeat.json
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc      8192 Jan  9 21:12 boinc_mmap_file
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc        27 Jan  9 21:12 wrapper_checkpoint.txt
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc       815 Jan  9 21:12 pilotlog.txt
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc   1296672 Jan  9 21:12 log.47898826._035543.job.log.1
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc       357 Jan  9 21:12 output.list
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc       620 Jan  9 21:12 runtime_log
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc   1720320 Jan  9 21:12 result.tar.gz
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc      8832 Jan  9 21:12 runtime_log.err
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc       652 Jan  9 21:12 0kuLDmdzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwZgKDmLNFfJn.diag
[2026-01-09 21:12:14] -rw-r--r--. 1 boinc boinc     21056 Jan  9 21:12 stderr.txt
[2026-01-09 21:12:14] HITS file was successfully produced:
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc 215771560 Jan  9 21:10 shared/HITS.pool.root.1
[2026-01-09 21:12:14]  *** Contents of shared directory: ***
[2026-01-09 21:12:14] total 432988
[2026-01-09 21:12:14] -rw-r--r--. 2 boinc boinc 225275399 Jan  9 18:30 ATLAS.root_0
[2026-01-09 21:12:14] -rw-r--r--. 2 boinc boinc     15847 Jan  9 18:30 start_atlas.sh
[2026-01-09 21:12:14] -rw-r--r--. 2 boinc boinc    592399 Jan  9 18:30 input.tar.gz
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc 215771560 Jan  9 21:10 HITS.pool.root.1
[2026-01-09 21:12:14] -rw-------. 1 boinc boinc   1720320 Jan  9 21:12 result.tar.gz
21:12:15 (13622): run_atlas exited; CPU time 73275.411617
21:12:15 (13622): called boinc_finish(0)

</stderr_txt>
]]>

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