Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:39:09 (3585769): wrapper (7.7.26015): starting
09:39:09 (3585769): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 09:39:09] Arguments: --nthreads 9
[2026-01-09 09:39:09] Threads: 9
[2026-01-09 09:39:09] Checking for CVMFS
[2026-01-09 09:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:39:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:39:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:39:10] 2.13.3.0 12388 93494 211280 154946 1 306 32178534 32935936 19042 16776704 0 413920098 99.472 552463420 38101 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 09:39:10] CVMFS is ok
[2026-01-09 09:39:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:39:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:39:10] Further information can be found at the LHC@home message board.
[2026-01-09 09:39:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:39:10] Checking for apptainer binary...
[2026-01-09 09:39:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:39:10] Running /usr/bin/apptainer --version
[2026-01-09 09:39:11] apptainer version 1.4.5-2.el9
[2026-01-09 09:39:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:39:11] c7-4-31.aglt2.org
[2026-01-09 09:39:11] apptainer works
[2026-01-09 09:39:11] Set ATHENA_PROC_NUMBER=9
[2026-01-09 09:39:11] Set ATHENA_CORE_NUMBER=9
[2026-01-09 09:39:11] Starting ATLAS job with PandaID=6963167248
[2026-01-09 09:39:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:22:28]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:22:28] 2026-01-09 19:21:28,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:22:28] 2026-01-09 19:21:29,150 | INFO     | time since job start (16897s) is within the limit (349056.0s)
[2026-01-09 14:22:28] 2026-01-09 19:21:31,157 | INFO     | time since job start (16899s) is within the limit (349056.0s)
[2026-01-09 14:22:28] 2026-01-09 19:21:31,307 | INFO     | monitor loop #1030: job 0:6963167248 is in state 'finished'
[2026-01-09 14:22:28] 2026-01-09 19:21:31,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:22:28] 2026-01-09 19:21:33,177 | INFO     | time since job start (16901s) is within the limit (349056.0s)
[2026-01-09 14:22:28] 2026-01-09 19:21:33,811 | INFO     | monitor loop #1031: job 0:6963167248 is in state 'finished'
[2026-01-09 14:22:28] 2026-01-09 19:21:33,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,191 | INFO     | time since job start (16903s) is within the limit (349056.0s)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,213 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:22:28] 2026-01-09 19:21:35,257 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3136.2744375
[2026-01-09 14:22:28] 2026-01-09 19:21:35,271 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963167248/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,272 | INFO     | extracted standard info from prmon json
[2026-01-09 14:22:28] 2026-01-09 19:21:35,272 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:22:28] 2026-01-09 19:21:35,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:22:28] 2026-01-09 19:21:35,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:22:28] 2026-01-09 19:21:35,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:22:28] 2026-01-09 19:21:35,277 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:22:28] 2026-01-09 19:21:35,277 | INFO     | sum of square deviations: 6519367655.985488
[2026-01-09 14:22:28] 2026-01-09 19:21:35,279 | INFO     | sum of deviations: 35513845984.9203
[2026-01-09 14:22:28] 2026-01-09 19:21:35,279 | INFO     | mean x: 1767978047.6594203
[2026-01-09 14:22:28] 2026-01-09 19:21:35,279 | INFO     | mean y: 2536096.6268115942
[2026-01-09 14:22:28] 2026-01-09 19:21:35,279 | INFO     | intersect: -9628413314.801273
[2026-01-09 14:22:28] 2026-01-09 19:21:35,279 | INFO     | chi2: 1.3865162932017654
[2026-01-09 14:22:28] 2026-01-09 19:21:35,280 | INFO     | sum of square deviations: 6171398582.797053
[2026-01-09 14:22:28] 2026-01-09 19:21:35,281 | INFO     | sum of deviations: 34725929086.83025
[2026-01-09 14:22:28] 2026-01-09 19:21:35,281 | INFO     | mean x: 1767977895.1512916
[2026-01-09 14:22:28] 2026-01-09 19:21:35,281 | INFO     | mean y: 2535751.1992619927
[2026-01-09 14:22:28] 2026-01-09 19:21:35,281 | INFO     | intersect: -9945723819.207767
[2026-01-09 14:22:28] 2026-01-09 19:21:35,282 | INFO     | chi2: 1.3869974838094126
[2026-01-09 14:22:28] 2026-01-09 19:21:35,282 | INFO     | current chi2=1.3869974838094126 (change=-0.034705009238369784 %)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,282 | INFO     | right removable region: 270
[2026-01-09 14:22:28] 2026-01-09 19:21:35,282 | INFO     | sum of square deviations: 6171422130.856125
[2026-01-09 14:22:28] 2026-01-09 19:21:35,284 | INFO     | sum of deviations: -5176567909.062729
[2026-01-09 14:22:28] 2026-01-09 19:21:35,284 | INFO     | mean x: 1767978200.1623616
[2026-01-09 14:22:28] 2026-01-09 19:21:35,284 | INFO     | mean y: 2553779.6605166052
[2026-01-09 14:22:28] 2026-01-09 19:21:35,284 | INFO     | intersect: 1485527885.276162
[2026-01-09 14:22:28] 2026-01-09 19:21:35,284 | INFO     | chi2: 0.03214356344186996
[2026-01-09 14:22:28] 2026-01-09 19:21:35,284 | INFO     | current chi2=0.03214356344186996 (change=97.6817031578011 %)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,285 | INFO     | sum of square deviations: 5836114187.868412
[2026-01-09 14:22:28] 2026-01-09 19:21:35,286 | INFO     | sum of deviations: -985248719.9210497
[2026-01-09 14:22:28] 2026-01-09 19:21:35,286 | INFO     | mean x: 1767978352.6578948
[2026-01-09 14:22:28] 2026-01-09 19:21:35,286 | INFO     | mean y: 2551871.3195488723
[2026-01-09 14:22:28] 2026-01-09 19:21:35,286 | INFO     | intersect: 301020741.655434
[2026-01-09 14:22:28] 2026-01-09 19:21:35,287 | INFO     | chi2: 0.024740320078478345
[2026-01-09 14:22:28] 2026-01-09 19:21:35,287 | INFO     | current chi2=0.024740320078478345 (change=23.03180659101475 %)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,287 | INFO     | left removable region: 20
[2026-01-09 14:22:28] 2026-01-09 19:21:35,287 | INFO     | sum of square deviations: 4845006253.024039
[2026-01-09 14:22:28] 2026-01-09 19:21:35,288 | INFO     | sum of deviations: 6240948243.159997
[2026-01-09 14:22:28] 2026-01-09 19:21:35,288 | INFO     | mean x: 1767978474.648
[2026-01-09 14:22:28] 2026-01-09 19:21:35,288 | INFO     | mean y: 2548096.32
[2026-01-09 14:22:28] 2026-01-09 19:21:35,288 | INFO     | intersect: -2274819894.3636603
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | chi2: 0.009820196719830499
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | current memory leak: 1.29 B/s (using 250 data points, chi2=0.01)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | could have reported an average CPU frequency of 3139 MHz (13 samples)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | ..............................
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | . Timing measurements:
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | . get job = 0 s
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | . initial setup = 4 s
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | . payload setup = 14 s
[2026-01-09 14:22:28] 2026-01-09 19:21:35,289 | INFO     | . stage-in = 0 s
[2026-01-09 14:22:28] 2026-01-09 19:21:35,290 | INFO     | . payload execution = 16829 s
[2026-01-09 14:22:28] 2026-01-09 19:21:35,290 | INFO     | . stage-out = 2 s
[2026-01-09 14:22:28] 2026-01-09 19:21:35,290 | INFO     | . log creation = 0 s
[2026-01-09 14:22:28] 2026-01-09 19:21:35,290 | INFO     | ..............................
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | 
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | job summary report
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | --------------------------------------------------
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | PanDA job id: 6963167248
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | task id: 47898826
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | errors: (none)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | pilot state: finished 
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | transexitcode: 0
[2026-01-09 14:22:28] 2026-01-09 19:21:35,366 | INFO     | exeerrorcode: 0
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | exeerrordiag: 
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | exitcode: 0
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | exitmsg: OK
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | cpuconsumptiontime: 47655 s
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | nevents: 400
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | neventsw: 0
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | pid: 3599289
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | pgrp: 3599289
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | corecount: 9
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | event service: False
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2284027, 13: 2284027, 21: 2284345, 23: 2284373, 16848: 2316439, 16851: 2325437, 16854: 2325493, 16863: 2325687}
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | --------------------------------------------------
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | 
[2026-01-09 14:22:28] 2026-01-09 19:21:35,367 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 14:22:28] 2026-01-09 19:21:35,385 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,385 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,385 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,385 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | job 6963167248 has completed (purged errors)
[2026-01-09 14:22:28] 2026-01-09 19:21:35,386 | INFO     | overall cleanup function is called
[2026-01-09 14:22:28] 2026-01-09 19:21:36,394 | INFO     | --- collectZombieJob: --- 10, [3599289]
[2026-01-09 14:22:28] 2026-01-09 19:21:36,395 | INFO     | zombie collector waiting for pid 3599289
[2026-01-09 14:22:28] 2026-01-09 19:21:36,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:22:28] 2026-01-09 19:21:36,396 | INFO     | collected zombie processes
[2026-01-09 14:22:28] 2026-01-09 19:21:36,399 | INFO     | will attempt to kill all subprocesses of pid=3599289
[2026-01-09 14:22:28] 2026-01-09 19:21:36,866 | INFO     | process IDs to be killed: [3599289] (in reverse order)
[2026-01-09 14:22:28] 2026-01-09 19:21:36,987 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:22:28] 2026-01-09 19:21:36,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:22:28] 2026-01-09 19:21:37,004 | INFO     | did not find any defunct processes belonging to 3599289
[2026-01-09 14:22:28] 2026-01-09 19:21:37,021 | INFO     | did not find any defunct processes belonging to 3599289
[2026-01-09 14:22:28] 2026-01-09 19:21:37,021 | INFO     | ready for new job
[2026-01-09 14:22:28] 2026-01-09 19:21:37,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:22:28] 2026-01-09 19:21:37,023 | INFO     | ***************************************
[2026-01-09 14:22:28] 2026-01-09 19:21:37,023 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:22:28] 2026-01-09 19:21:37,023 | INFO     | ***************************************
[2026-01-09 14:22:28] 2026-01-09 19:21:37,023 | INFO     | 
[2026-01-09 14:22:28] 2026-01-09 19:21:37,028 | INFO     | architecture information:
[2026-01-09 14:22:28] 2026-01-09 19:21:37,028 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:22:28] 2026-01-09 19:21:37,044 | INFO     | cat /etc/os-release:
[2026-01-09 14:22:28] NAME="CentOS Linux"
[2026-01-09 14:22:28] VERSION="7 (Core)"
[2026-01-09 14:22:28] ID="centos"
[2026-01-09 14:22:28] ID_LIKE="rhel fedora"
[2026-01-09 14:22:28] VERSION_ID="7"
[2026-01-09 14:22:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:22:28] ANSI_COLOR="0;31"
[2026-01-09 14:22:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:22:28] HOME_URL="https://www.centos.org/"
[2026-01-09 14:22:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:22:28] 
[2026-01-09 14:22:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:22:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:22:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:22:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:22:28] 
[2026-01-09 14:22:28] 2026-01-09 19:21:37,044 | INFO     | ***************************************
[2026-01-09 14:22:28] 2026-01-09 19:21:37,548 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 14:22:28] 2026-01-09 19:21:37,564 | INFO     | sufficient remaining disk space (74120691712 B)
[2026-01-09 14:22:28] 2026-01-09 19:21:37,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:22:28] 2026-01-09 19:21:37,564 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:22:28] 2026-01-09 19:21:37,565 | INFO     | update_server=False
[2026-01-09 14:22:28] 2026-01-09 19:21:37,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:22:28] 2026-01-09 19:21:37,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:22:28] 2026-01-09 19:21:37,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:22:28] 2026-01-09 19:21:37,565 | INFO     | aborting loop
[2026-01-09 14:22:28] 2026-01-09 19:21:38,019 | INFO     | all job control threads have been joined
[2026-01-09 14:22:28] 2026-01-09 19:21:38,318 | INFO     | all data control threads have been joined
[2026-01-09 14:22:28] 2026-01-09 19:21:38,453 | INFO     | all payload control threads have been joined
[2026-01-09 14:22:28] 2026-01-09 19:21:38,570 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:38,571 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:38,681 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:38,711 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:38,835 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:38,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:22:28] 2026-01-09 19:21:39,025 | INFO     | [job] control thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:39,147 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:39,218 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:39,323 | INFO     | [data] control thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:39,459 | INFO     | [payload] control thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:39,643 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:39,917 | INFO     | [job] validate thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:39,963 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:40,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:22:28] 2026-01-09 19:21:40,947 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:41,384 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:21:41,575 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:22:28] 2026-01-09 19:22:08,765 | INFO     | PID=3589637 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 14:22:28] 2026-01-09 19:22:08,766 | INFO     | .. there are 17 such processes running
[2026-01-09 14:22:28] 2026-01-09 19:22:08,766 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:22:28] 2026-01-09 19:22:08,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:22:28] 2026-01-09 19:22:08,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:22:28] 2026-01-09 19:22:21,115 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:22:28] 2026-01-09 19:22:21,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633912289088)>', '<ExcThread(monitor, started 140633570260736)>']
[2026-01-09 14:22:28] 2026-01-09 19:22:22,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:22:28] 2026-01-09 19:22:22,852 | INFO     | [monitor] control thread has ended
[2026-01-09 14:22:28] 2026-01-09 19:22:26,942 | INFO     | all workflow threads have been joined
[2026-01-09 14:22:28] 2026-01-09 19:22:26,961 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:22:28] 2026-01-09 19:22:26,962 | INFO     | traces error code: 0
[2026-01-09 14:22:28] 2026-01-09 19:22:26,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:22:28] 2026-01-09 19:22:27,537 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:22:28] 2026-01-09 19:22:27,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:22:28] 2026-01-09 19:22:27,557 [wrapper] pilotpid: 3589637
[2026-01-09 14:22:28] 2026-01-09 19:22:27,579 [wrapper] Pilot exit status: 0
[2026-01-09 14:22:28] 2026-01-09 19:22:27,758 [wrapper] pandaids: 6963167248
[2026-01-09 14:22:28] 2026-01-09 19:22:27,910 [wrapper] cleanup supervisor_pilot  147668 3589638
[2026-01-09 14:22:28] 2026-01-09 19:22:27,912 [wrapper] Test setup, not cleaning
[2026-01-09 14:22:28] 2026-01-09 19:22:27,914 [wrapper] apfmon messages muted
[2026-01-09 14:22:28] 2026-01-09 19:22:27,916 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:22:28] 2026-01-09 19:22:27,919 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:22:28]  *** Error codes and diagnostics ***
[2026-01-09 14:22:28]     "exeErrorCode": 0,
[2026-01-09 14:22:28]     "exeErrorDiag": "",
[2026-01-09 14:22:28]     "pilotErrorCode": 0,
[2026-01-09 14:22:28]     "pilotErrorDiag": "",
[2026-01-09 14:22:28]  *** Listing of results directory ***
[2026-01-09 14:22:28] total 435472
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 14:22:28] -rwx------. 1 boincer umatlas     36322 Jan  8 19:57 runpilot2-wrapper.sh
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:57 queuedata.json
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas       100 Jan  9 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:22:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 09:39 run_atlas
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas       105 Jan  9 09:39 job.xml
[2026-01-09 14:22:28] -rw-r--r--. 2 boincer umatlas 221166043 Jan  9 09:39 EVNT.47898824._001380.pool.root.1
[2026-01-09 14:22:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:39 start_atlas.sh
[2026-01-09 14:22:28] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 09:39 shared
[2026-01-09 14:22:28] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 09:39 input.tar.gz
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas         0 Jan  9 09:39 boinc_lockfile
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 09:39 pandaJob.out
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas        57 Jan  9 09:39 setup.sh.local
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas    989377 Jan  9 09:39 agis_schedconf.cvmfs.json
[2026-01-09 14:22:28] drwx------. 5 boincer umatlas      4096 Jan  9 09:39 pilot3
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas 215543972 Jan  9 14:20 HITS.47898826._035623.pool.root.1
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas       530 Jan  9 14:20 boinc_task_state.xml
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 14:21 init_data.xml
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas      1033 Jan  9 14:21 memory_monitor_summary.json
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas    516282 Jan  9 14:21 log.47898826._035623.job.log.tgz.1
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas        95 Jan  9 14:21 pilot_heartbeat.json
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas      7774 Jan  9 14:21 heartbeat.json
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas      4824 Jan  9 14:22 pilotlog.txt
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas        28 Jan  9 14:22 wrapper_checkpoint.txt
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 14:22 boinc_mmap_file
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas   2130967 Jan  9 14:22 log.47898826._035623.job.log.1
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas       357 Jan  9 14:22 output.list
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas       620 Jan  9 14:22 runtime_log
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas   2662400 Jan  9 14:22 result.tar.gz
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 14:22 runtime_log.err
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas       655 Jan  9 14:22 oitMDmnzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAplKDmNQnsun.diag
[2026-01-09 14:22:28] -rw-r--r--. 1 boincer umatlas     21434 Jan  9 14:22 stderr.txt
[2026-01-09 14:22:28] HITS file was successfully produced:
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas 215543972 Jan  9 14:20 shared/HITS.pool.root.1
[2026-01-09 14:22:28]  *** Contents of shared directory: ***
[2026-01-09 14:22:28] total 429684
[2026-01-09 14:22:28] -rw-r--r--. 2 boincer umatlas 221166043 Jan  9 09:39 ATLAS.root_0
[2026-01-09 14:22:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 09:39 start_atlas.sh
[2026-01-09 14:22:28] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 09:39 input.tar.gz
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas 215543972 Jan  9 14:20 HITS.pool.root.1
[2026-01-09 14:22:28] -rw-------. 1 boincer umatlas   2662400 Jan  9 14:22 result.tar.gz
14:22:29 (3585769): run_atlas exited; CPU time 48182.324042
14:22:29 (3585769): called boinc_finish(0)

</stderr_txt>
]]>

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